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Tag Content
iUUCD ID IUUC-Lch-050427
Ensembl Protein ID ENSLACP00000013812.1
UniProt Accession H3AVZ1; H3AVZ1_LATCH
Genbank Protein ID ENSLACP00000013812
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01039305
Gene Name ARPC1A
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000012158.1 ENSLACT00000013908.1 ENSLACP00000013811.1
ENSLACG00000012158.1 ENSLACT00000013909.1 ENSLACP00000013812.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.70e-12 45.4 56 87
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ +t++++ +  +++v+++ D + +vW+ +
   Q: 56   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQK 87
           9999*******6669**************965 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
SPVFTMSLHQ FLLEPITCHA WNRDRTQIAI SPNNHEVHIY KKSGNQWIKA HELKEHNGHI 60
TGIDWAPKSD RIVTCGADRN AYVWSQKDGM WKPTLVILRI NRAATFVKWS PLENKFAVGS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050427|E3,WD_repeat|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGTTCTTCT GTCTCTTCAC GTTGTTTTTA TGCAATTTTC TTCATTTTTA TTTGCAAACA 60
AGAAGCAGTT TCCCACTAGG TGTACTGTTT TATGGAATGA GACTATTGCA TCTTGGGAGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050427|E3,WD_repeat|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002044 Ailuropoda melanoleuca 89.76 0.00e+00 677.00
IUUC-Apl-003325 Anas platyrhynchos 92.99 0.00e+00 728.00
IUUC-Aca-004736 Anolis carolinensis 91.37 0.00e+00 717.00
IUUC-Ago-007966 Ashbya gossypii 38.46 1.00e-64 239.00
IUUC-Acl-008334 Aspergillus clavatus 46.11 5.00e-90 324.00
IUUC-Afl-008485 Aspergillus flavus 46.39 7.00e-87 314.00
IUUC-Afu-008780 Aspergillus fumigatus 46.26 2.00e-91 328.00
IUUC-Ani-009417 Aspergillus nidulans 46.43 4.00e-90 324.00
IUUC-Ang-009543 Aspergillus niger 48.06 2.00e-92 332.00
IUUC-Aor-010234 Aspergillus oryzae 46.67 1.00e-88 320.00
IUUC-Ate-010386 Aspergillus terreus 46.98 1.00e-92 333.00
IUUC-Ame-011852 Astyanax mexicanus 89.22 0.00e+00 698.00
IUUC-Bgr-012192 Blumeria graminis 43.37 1.00e-82 299.00
IUUC-Bta-012530 Bos taurus 89.76 0.00e+00 676.00
IUUC-Bci-013616 Botrytis cinerea 45.03 8.00e-87 313.00
IUUC-Cel-018122 Caenorhabditis elegans 53.93 2.00e-105 375.00
IUUC-Cja-019362 Callithrix jacchus 89.76 0.00e+00 677.00
IUUC-Cfa-020167 Canis familiaris 89.76 0.00e+00 678.00
IUUC-Cpo-021933 Cavia porcellus 89.76 0.00e+00 679.00
IUUC-Cho-024449 Choloepus hoffmanni 65.43 9.00e-84 303.00
IUUC-Cin-025186 Ciona intestinalis 54.99 8.00e-114 403.00
IUUC-Csv-026275 Ciona savignyi 54.59 2.00e-109 389.00
IUUC-Cgl-026732 Colletotrichum gloeosporioides 44.72 9.00e-87 313.00
IUUC-Cne-026926 Cryptococcus neoformans 46.53 2.00e-97 349.00
IUUC-Dre-028057 Danio rerio 88.95 0.00e+00 696.00
IUUC-Dno-029092 Dasypus novemcinctus 88.61 0.00e+00 648.00
IUUC-Dor-030391 Dipodomys ordii 89.14 0.00e+00 650.00
IUUC-Dse-031574 Dothistroma septosporum 44.26 2.00e-81 295.00
IUUC-Dme-031907 Drosophila melanogaster 55.43 1.00e-122 432.00
IUUC-Eca-034074 Equus caballus 89.76 0.00e+00 677.00
IUUC-Eeu-035041 Erinaceus europaeus 73.75 1.00e-81 296.00
IUUC-Fca-036154 Felis catus 89.76 0.00e+00 677.00
IUUC-Fal-037279 Ficedula albicollis 92.72 0.00e+00 724.00
IUUC-Fox-037842 Fusarium oxysporum 45.56 8.00e-87 313.00
IUUC-Fso-038276 Fusarium solani 45.71 1.00e-86 313.00
IUUC-Gmo-039673 Gadus morhua 86.25 0.00e+00 638.00
IUUC-Ggr-039762 Gaeumannomyces graminis 44.04 2.00e-85 308.00
IUUC-Gga-040189 Gallus gallus 92.45 0.00e+00 722.00
IUUC-Gac-042531 Gasterosteus aculeatus 87.60 0.00e+00 644.00
IUUC-Hsa-046309 Homo sapiens 89.76 0.00e+00 677.00
IUUC-Hvu-047456 Hordeum vulgare 30.72 1.00e-15 76.30
IUUC-Itr-047864 Ictidomys tridecemlineatus 89.76 0.00e+00 677.00
IUUC-Kpa-049288 Komagataella pastoris 40.54 2.00e-74 272.00
IUUC-Loc-052532 Lepisosteus oculatus 90.62 0.00e+00 678.00
IUUC-Lma-053109 Leptosphaeria maculans 44.90 6.00e-86 310.00
IUUC-Laf-054271 Loxodonta africana 90.03 0.00e+00 678.00
IUUC-Mcc-054857 Macaca mulatta 88.59 0.00e+00 654.00
IUUC-Meu-056540 Macropus eugenii 87.68 3.00e-170 590.00
IUUC-Mor-057167 Magnaporthe oryzae 43.09 1.00e-82 299.00
IUUC-Mla-058886 Melampsora laricipopulina 43.07 5.00e-87 314.00
IUUC-Mga-059327 Meleagris gallopavo 92.45 0.00e+00 722.00
IUUC-Mvi-060302 Microbotryum violaceum 45.01 8.00e-91 327.00
IUUC-Mmr-060765 Microcebus murinus 88.35 0.00e+00 656.00
IUUC-Mdo-062326 Monodelphis domestica 90.57 0.00e+00 682.00
IUUC-Mmu-063819 Mus musculus 89.49 0.00e+00 676.00
IUUC-Mlu-067184 Myotis lucifugus 90.03 0.00e+00 679.00
IUUC-Nfi-068383 Neosartorya fischeri 46.54 2.00e-91 328.00
IUUC-Ncr-068777 Neurospora crassa 43.56 5.00e-86 311.00
IUUC-Nle-069900 Nomascus leucogenys 89.76 0.00e+00 677.00
IUUC-Opr-070386 Ochotona princeps 81.13 8.00e-171 592.00
IUUC-Ont-071283 Oreochromis niloticus 88.14 0.00e+00 648.00
IUUC-Oan-073139 Ornithorhynchus anatinus 91.11 0.00e+00 687.00
IUUC-Ocu-074340 Oryctolagus cuniculus 89.76 0.00e+00 677.00
IUUC-Ola-087274 Oryzias latipes 86.02 1.00e-180 625.00
IUUC-Oga-088016 Otolemur garnettii 89.76 0.00e+00 675.00
IUUC-Oar-089613 Ovis aries 89.49 0.00e+00 675.00
IUUC-Ptr-091548 Pan troglodytes 89.76 0.00e+00 677.00
IUUC-Psi-093767 Pelodiscus sinensis 92.72 0.00e+00 724.00
IUUC-Pma-094124 Petromyzon marinus 76.76 2.00e-173 601.00
IUUC-Pno-095031 Phaeosphaeria nodorum 45.08 2.00e-85 309.00
IUUC-Ppa-095858 Physcomitrella patens 45.14 2.00e-82 299.00
IUUC-Pfo-097107 Poecilia formosa 88.68 0.00e+00 648.00
IUUC-Pva-102908 Pteropus vampyrus 87.39 2.00e-170 591.00
IUUC-Pgr-103309 Puccinia graminis 43.00 2.00e-89 322.00
IUUC-Ptt-103959 Puccinia triticina 44.11 1.00e-91 330.00
IUUC-Pte-104384 Pyrenophora teres 45.58 7.00e-85 307.00
IUUC-Pyt-104686 Pyrenophora triticirepentis 45.58 1.00e-84 306.00
IUUC-Rno-105008 Rattus norvegicus 88.72 6.00e-170 589.00
IUUC-Sce-106411 Saccharomyces cerevisiae 36.13 3.00e-61 229.00
IUUC-Sha-106691 Sarcophilus harrisii 91.03 0.00e+00 681.00
IUUC-Sja-107792 Schizosaccharomyces japonicus 45.82 3.00e-87 315.00
IUUC-Spo-108053 Schizosaccharomyces pombe 43.80 1.00e-87 316.00
IUUC-Ssl-108606 Sclerotinia sclerotiorum 45.30 5.00e-87 314.00
IUUC-Sar-113599 Sorex araneus 78.83 3.00e-159 553.00
IUUC-Sre-115090 Sporisorium reilianum 45.12 2.00e-94 338.00
IUUC-Ssc-115851 Sus scrofa 89.22 0.00e+00 675.00
IUUC-Tgu-116701 Taeniopygia guttata 92.72 0.00e+00 724.00
IUUC-Tru-117603 Takifugu rubripes 86.21 0.00e+00 650.00
IUUC-Tsy-119515 Tarsius syrichta 84.03 1.00e-68 253.00
IUUC-Tni-119844 Tetraodon nigroviridis 88.68 0.00e+00 646.00
IUUC-Tre-122045 Trichoderma reesei 45.00 1.00e-85 309.00
IUUC-Tvi-122523 Trichoderma virens 44.88 3.00e-85 308.00
IUUC-Tme-127018 Tuber melanosporum 45.08 2.00e-84 305.00
IUUC-Tbe-127321 Tupaia belangeri 89.33 8.00e-171 592.00
IUUC-Ttr-128178 Tursiops truncatus 88.83 0.00e+00 629.00
IUUC-Uma-129423 Ustilago maydis 45.34 4.00e-96 344.00
IUUC-Vda-129706 Verticillium dahliae 45.45 8.00e-88 317.00
IUUC-Xtr-132735 Xenopus tropicalis 83.83 8.00e-180 622.00
IUUC-Xma-133435 Xiphophorus maculatus 88.68 0.00e+00 648.00
Created Date 25-Jun-2017

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