iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074615

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02038003

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000002076.2	ENSOCUT00000002076.2	ENSOCUP00000001792.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-13	48.2	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ +vt +a+  s+ +ll+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpSCdWLLATASVDQTVKIWDLRQ 274
           88999******8445****************986 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAPKKRPEAQ KPLEVVLRPR SKRNRSPRDP EPEAKKLNVT GCAPGRRSDS DCLPAGLPGL 60
QDPQPCSSLV RALHQHRLGR TAWPSLQQGL QQSFLHSLAS YRIFQKAAPF DRRATSLAWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCCA AGAAACGCCC CGAAGCCCAG AAGCCCCTCG AGGTTGTGCT GCGCCCCCGG 60
AGCAAGAGGA ACCGAAGTCC CCGAGACCCA GAGCCCGAGG CCAAGAAGCT GAACGTCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

KEGG

ocu:100352386

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.94	4.00e-32	132.00
IUUC-Aml-002203	Ailuropoda melanoleuca	84.98	0.00e+00	724.00
IUUC-Atr-002957	Amborella trichopoda	29.70	3.00e-35	142.00
IUUC-Apl-003832	Anas platyrhynchos	58.15	6.00e-122	431.00
IUUC-Aca-004358	Anolis carolinensis	49.35	2.00e-124	439.00
IUUC-Aly-006296	Arabidopsis lyrata	31.93	7.00e-36	145.00
IUUC-Ath-007115	Arabidopsis thaliana	31.93	3.00e-36	146.00
IUUC-Ame-010817	Astyanax mexicanus	52.34	9.00e-119	420.00
IUUC-Bta-012914	Bos taurus	84.07	0.00e+00	742.00
IUUC-Bdi-014261	Brachypodium distachyon	30.25	1.00e-32	134.00
IUUC-Bol-015317	Brassica oleracea	30.67	1.00e-35	144.00
IUUC-Bra-016848	Brassica rapa	31.60	9.00e-36	144.00
IUUC-Cja-018967	Callithrix jacchus	83.84	0.00e+00	726.00
IUUC-Cfa-021238	Canis familiaris	84.74	0.00e+00	698.00
IUUC-Cpo-022063	Cavia porcellus	79.25	0.00e+00	702.00
IUUC-Csa-023382	Chlorocebus sabaeus	84.31	0.00e+00	761.00
IUUC-Cho-024805	Choloepus hoffmanni	56.91	3.00e-88	317.00
IUUC-Dre-028732	Danio rerio	47.25	9.00e-106	377.00
IUUC-Dor-030461	Dipodomys ordii	78.31	2.00e-125	442.00
IUUC-Ete-033038	Echinops telfairi	71.66	0.00e+00	636.00
IUUC-Eca-033772	Equus caballus	82.90	0.00e+00	686.00
IUUC-Eeu-034662	Erinaceus europaeus	61.50	1.00e-63	236.00
IUUC-Fca-036095	Felis catus	83.61	0.00e+00	710.00
IUUC-Gmo-039683	Gadus morhua	48.19	3.00e-103	368.00
IUUC-Gga-040530	Gallus gallus	58.24	2.00e-123	436.00
IUUC-Gac-041517	Gasterosteus aculeatus	48.36	2.00e-95	342.00
IUUC-Gma-043378	Glycine max	30.93	5.00e-36	145.00
IUUC-Ggo-045364	Gorilla gorilla	84.54	0.00e+00	762.00
IUUC-Hsa-046354	Homo sapiens	84.31	0.00e+00	760.00
IUUC-Hvu-047151	Hordeum vulgare	30.66	8.00e-29	120.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	85.92	0.00e+00	753.00
IUUC-Lpe-051256	Leersia perrieri	30.25	9.00e-32	131.00
IUUC-Loc-052398	Lepisosteus oculatus	54.93	3.00e-127	448.00
IUUC-Laf-053562	Loxodonta africana	82.44	0.00e+00	706.00
IUUC-Mcc-055197	Macaca mulatta	65.89	5.00e-158	550.00
IUUC-Meu-056151	Macropus eugenii	74.55	6.00e-119	419.00
IUUC-Mtr-057940	Medicago truncatula	32.62	5.00e-38	152.00
IUUC-Mga-059923	Meleagris gallopavo	58.24	1.00e-130	459.00
IUUC-Mmr-061465	Microcebus murinus	89.21	1.00e-152	532.00
IUUC-Mdo-063063	Monodelphis domestica	64.68	2.00e-158	551.00
IUUC-Mmu-064294	Mus musculus	78.22	0.00e+00	685.00
IUUC-Mac-065598	Musa acuminata	32.54	5.00e-36	145.00
IUUC-Mpu-066831	Mustela putorius furo	83.80	0.00e+00	722.00
IUUC-Mlu-067222	Myotis lucifugus	81.03	0.00e+00	722.00
IUUC-Nle-069581	Nomascus leucogenys	84.54	0.00e+00	765.00
IUUC-Opr-070644	Ochotona princeps	87.41	0.00e+00	765.00
IUUC-Ont-072605	Oreochromis niloticus	54.10	7.00e-115	407.00
IUUC-Oan-072973	Ornithorhynchus anatinus	72.22	7.00e-153	533.00
IUUC-Oba-075283	Oryza barthii	29.94	2.00e-31	130.00
IUUC-Obr-076605	Oryza brachyantha	30.84	4.00e-34	139.00
IUUC-Ogl-077512	Oryza glaberrima	29.94	2.00e-31	130.00
IUUC-Ogu-078329	Oryza glumaepatula	29.94	2.00e-31	130.00
IUUC-Oin-079980	Oryza indica	29.94	3.00e-31	129.00
IUUC-Olo-080516	Oryza longistaminata	29.63	2.00e-31	130.00
IUUC-Ome-081415	Oryza meridionalis	29.94	3.00e-31	129.00
IUUC-Oni-082985	Oryza nivara	29.94	3.00e-31	129.00
IUUC-Opu-084159	Oryza punctata	30.56	2.00e-32	133.00
IUUC-Oru-085137	Oryza rufipogon	29.94	2.00e-31	130.00
IUUC-Osa-085614	Oryza sativa	29.94	2.00e-31	130.00
IUUC-Ola-087044	Oryzias latipes	46.03	1.00e-102	366.00
IUUC-Oga-088274	Otolemur garnettii	84.78	0.00e+00	746.00
IUUC-Oar-089826	Ovis aries	84.54	0.00e+00	752.00
IUUC-Ptr-091631	Pan troglodytes	84.31	0.00e+00	760.00
IUUC-Pan-092535	Papio anubis	84.78	0.00e+00	765.00
IUUC-Psi-093815	Pelodiscus sinensis	52.84	8.00e-121	427.00
IUUC-Pma-094474	Petromyzon marinus	48.66	2.00e-97	348.00
IUUC-Ppa-095414	Physcomitrella patens	28.92	1.00e-27	118.00
IUUC-Pfo-096559	Poecilia formosa	47.99	6.00e-100	357.00
IUUC-Pab-098528	Pongo abelii	84.31	0.00e+00	762.00
IUUC-Pop-100064	Populus trichocarpa	31.72	7.00e-37	148.00
IUUC-Pca-100803	Procavia capensis	79.16	0.00e+00	687.00
IUUC-Ppe-101966	Prunus persica	31.40	2.00e-36	147.00
IUUC-Pva-103213	Pteropus vampyrus	80.80	0.00e+00	673.00
IUUC-Rno-105087	Rattus norvegicus	78.45	0.00e+00	693.00
IUUC-Sha-107466	Sarcophilus harrisii	70.28	1.00e-154	539.00
IUUC-Smo-108958	Selaginella moellendorffii	28.74	2.00e-27	116.00
IUUC-Sit-109968	Setaria italica	29.01	1.00e-30	127.00
IUUC-Sly-111495	Solanum lycopersicum	30.58	2.00e-33	137.00
IUUC-Stu-112182	Solanum tuberosum	27.38	6.00e-14	72.80
IUUC-Sar-113272	Sorex araneus	80.53	2.00e-168	585.00
IUUC-Sbi-114706	Sorghum bicolor	27.81	8.00e-27	115.00
IUUC-Ssc-115437	Sus scrofa	83.84	0.00e+00	736.00
IUUC-Tgu-116602	Taeniopygia guttata	51.10	1.00e-121	429.00
IUUC-Tru-118698	Takifugu rubripes	47.91	8.00e-96	343.00
IUUC-Tsy-119027	Tarsius syrichta	81.05	0.00e+00	653.00
IUUC-Tni-119787	Tetraodon nigroviridis	48.04	1.00e-99	356.00
IUUC-Tca-121447	Theobroma cacao	30.03	1.00e-34	141.00
IUUC-Tae-125839	Triticum aestivum	30.25	2.00e-32	134.00
IUUC-Tur-126724	Triticum urartu	30.25	2.00e-32	134.00
IUUC-Tbe-127680	Tupaia belangeri	81.45	9.00e-134	469.00
IUUC-Ttr-128201	Tursiops truncatus	74.00	1.00e-177	615.00
IUUC-Vpa-130451	Vicugna pacos	67.03	5.00e-102	364.00
IUUC-Vvi-131001	Vitis vinifera	29.63	3.00e-34	139.00
IUUC-Xtr-132266	Xenopus tropicalis	56.68	6.00e-129	454.00
IUUC-Xma-133034	Xiphophorus maculatus	52.73	6.00e-114	404.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence