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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-104857
Ensembl Protein ID ENSRNOP00000006281.6
UniProt Accession B2RYB0; F1LQP6; B2RYB0_RAT
Genbank Protein ID AAI66712.1
Protein Name WD repeat domain 25; Wdr25l protein
Genbank Nucleotide ID AABR07065506
Gene Name Wdr25; Wdr25l
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000004733.6 ENSRNOT00000006281.6 ENSRNOP00000006281.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
PhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.40e-19 68.5 233 275
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvW.Dlrtgvllk 37
           gH ++v+++++    s  ++l+s+s D+t kvW  +++g++l+
   Q: 233  GHRGPVNSIQWcpvfSKsHMLLSASMDKTFKVWnAVDSGHCLQ 275
           8*************95569**************8888888877 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MASLVAYDDS DPESEADPAR SGDAAGQMSD VSGISRPEVE FASSTGVTKE GAQHTGNSPY 60
EDPGKQRLPL ARLWRSDPGS CPSQRLQWPS KEPDSTFPTS EPPGPSLWMN RAPVGHVPLA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104857|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGACCAAGCT CCGGCTTGAT GACAAGCACC TTTAATCCAC CGAGGCTTCT TGCTGGCCCA 60
GACATCATAT ACTTTATAGT TTTCCCTTTT TAAAAGGTAT GTTTTCTATT TTTAAGTGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104857|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG rno:314443
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001588 Ailuropoda melanoleuca 75.14 0.00e+00 803.00
IUUC-Atr-003155 Amborella trichopoda 36.51 6.00e-64 238.00
IUUC-Apl-003544 Anas platyrhynchos 68.25 6.00e-88 316.00
IUUC-Aly-006510 Arabidopsis lyrata 35.46 1.00e-65 243.00
IUUC-Ath-007329 Arabidopsis thaliana 36.62 2.00e-67 249.00
IUUC-Ame-010607 Astyanax mexicanus 58.11 4.00e-73 267.00
IUUC-Bta-013542 Bos taurus 71.93 0.00e+00 760.00
IUUC-Bdi-014736 Brachypodium distachyon 34.76 9.00e-69 254.00
IUUC-Bol-016112 Brassica oleracea 37.06 1.00e-67 249.00
IUUC-Bra-016685 Brassica rapa 37.38 2.00e-67 249.00
IUUC-Cja-018883 Callithrix jacchus 76.39 0.00e+00 800.00
IUUC-Cfa-021278 Canis familiaris 74.77 0.00e+00 798.00
IUUC-Cpo-022449 Cavia porcellus 81.60 3.00e-170 590.00
IUUC-Csa-023916 Chlorocebus sabaeus 77.43 0.00e+00 800.00
IUUC-Csv-026371 Ciona savignyi 32.12 7.00e-42 164.00
IUUC-Dno-029053 Dasypus novemcinctus 59.25 9.00e-102 363.00
IUUC-Dor-030299 Dipodomys ordii 67.78 5.00e-136 477.00
IUUC-Ete-032974 Echinops telfairi 43.68 8.00e-73 268.00
IUUC-Eca-033484 Equus caballus 73.10 0.00e+00 761.00
IUUC-Fca-035673 Felis catus 74.77 0.00e+00 781.00
IUUC-Fal-036795 Ficedula albicollis 67.89 9.00e-141 492.00
IUUC-Gmo-039062 Gadus morhua 56.78 3.00e-92 331.00
IUUC-Gga-040773 Gallus gallus 68.75 3.00e-116 410.00
IUUC-Gac-042364 Gasterosteus aculeatus 57.93 5.00e-94 337.00
IUUC-Gma-043100 Glycine max 38.41 6.00e-64 238.00
IUUC-Ggo-045220 Gorilla gorilla 76.72 0.00e+00 789.00
IUUC-Hsa-046511 Homo sapiens 77.61 0.00e+00 798.00
IUUC-Hvu-047431 Hordeum vulgare 37.10 1.00e-63 236.00
IUUC-Lch-049590 Latimeria chalumnae 66.42 3.00e-110 390.00
IUUC-Lpe-050810 Leersia perrieri 37.96 8.00e-51 194.00
IUUC-Loc-052196 Lepisosteus oculatus 55.50 1.00e-123 436.00
IUUC-Laf-053481 Loxodonta africana 70.64 4.00e-138 484.00
IUUC-Mcc-055622 Macaca mulatta 76.87 0.00e+00 795.00
IUUC-Meu-055978 Macropus eugenii 34.64 6.00e-37 147.00
IUUC-Mtr-058041 Medicago truncatula 38.17 2.00e-63 236.00
IUUC-Mga-060149 Meleagris gallopavo 68.90 4.00e-89 320.00
IUUC-Mmr-061552 Microcebus murinus 74.30 0.00e+00 793.00
IUUC-Mdo-061969 Monodelphis domestica 50.71 6.00e-154 537.00
IUUC-Mmu-063343 Mus musculus 94.02 0.00e+00 917.00
IUUC-Mac-065079 Musa acuminata 36.74 3.00e-58 219.00
IUUC-Mpu-065949 Mustela putorius furo 74.06 0.00e+00 688.00
IUUC-Mlu-067523 Myotis lucifugus 72.32 0.00e+00 650.00
IUUC-Nle-069645 Nomascus leucogenys 72.97 3.00e-161 561.00
IUUC-Ont-072361 Oreochromis niloticus 50.78 9.00e-113 400.00
IUUC-Ocu-074916 Oryctolagus cuniculus 68.94 4.00e-137 481.00
IUUC-Oba-075367 Oryza barthii 37.71 2.00e-58 219.00
IUUC-Obr-076738 Oryza brachyantha 38.14 3.00e-63 236.00
IUUC-Ogu-078590 Oryza glumaepatula 37.71 2.00e-58 219.00
IUUC-Oin-079678 Oryza indica 37.82 1.00e-63 236.00
IUUC-Olo-080453 Oryza longistaminata 37.55 4.00e-61 228.00
IUUC-Ome-081794 Oryza meridionalis 40.33 3.00e-53 202.00
IUUC-Oni-082432 Oryza nivara 37.94 1.00e-63 237.00
IUUC-Opu-083897 Oryza punctata 38.02 9.00e-64 237.00
IUUC-Oru-085068 Oryza rufipogon 35.95 5.00e-56 211.00
IUUC-Osa-085805 Oryza sativa 37.82 1.00e-63 237.00
IUUC-Ola-087567 Oryzias latipes 56.25 6.00e-93 333.00
IUUC-Oga-088168 Otolemur garnettii 76.64 0.00e+00 803.00
IUUC-Oar-090158 Ovis aries 66.04 2.00e-179 622.00
IUUC-Ptr-090913 Pan troglodytes 67.35 0.00e+00 685.00
IUUC-Pan-092157 Papio anubis 77.80 0.00e+00 805.00
IUUC-Psi-093817 Pelodiscus sinensis 69.12 4.00e-117 413.00
IUUC-Pma-094263 Petromyzon marinus 55.87 9.00e-57 212.00
IUUC-Ppa-095302 Physcomitrella patens 37.66 2.00e-65 243.00
IUUC-Pfo-097526 Poecilia formosa 50.90 5.00e-113 401.00
IUUC-Pab-098152 Pongo abelii 76.71 0.00e+00 739.00
IUUC-Pop-099987 Populus trichocarpa 39.87 4.00e-71 261.00
IUUC-Pca-100527 Procavia capensis 60.06 1.00e-101 363.00
IUUC-Ppe-101575 Prunus persica 35.37 2.00e-66 246.00
IUUC-Pva-102942 Pteropus vampyrus 72.17 0.00e+00 761.00
IUUC-Sha-106763 Sarcophilus harrisii 50.26 2.00e-158 552.00
IUUC-Sit-110488 Setaria italica 38.46 4.00e-64 238.00
IUUC-Sly-110893 Solanum lycopersicum 36.89 3.00e-62 232.00
IUUC-Stu-112566 Solanum tuberosum 36.25 8.00e-61 227.00
IUUC-Sar-113617 Sorex araneus 58.21 9.00e-121 427.00
IUUC-Sbi-114566 Sorghum bicolor 37.06 2.00e-65 243.00
IUUC-Tgu-117015 Taeniopygia guttata 68.20 1.00e-140 492.00
IUUC-Tsy-119467 Tarsius syrichta 65.85 2.00e-118 418.00
IUUC-Tca-121587 Theobroma cacao 36.74 1.00e-64 240.00
IUUC-Tae-123717 Triticum aestivum 37.42 6.00e-64 238.00
IUUC-Tbe-127502 Tupaia belangeri 66.04 0.00e+00 628.00
IUUC-Ttr-129033 Tursiops truncatus 75.14 0.00e+00 786.00
IUUC-Vvi-131505 Vitis vinifera 36.42 5.00e-66 244.00
IUUC-Xtr-132851 Xenopus tropicalis 61.54 6.00e-79 286.00
IUUC-Xma-133463 Xiphophorus maculatus 51.74 3.00e-111 395.00
Created Date 25-Jun-2017

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