iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057675

Ensembl Protein ID

KEH20145

UniProt Accession

A0A072U2U6; A0A072U2U6_MEDTR

Genbank Protein ID

KEH20145.1

Protein Name

Plant poly(A)+ RNA export protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g068875

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g068875	KEH20145	KEH20145

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-23	82.6	112	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H +++  +a+ ++  ll++Gs D+t+k WD+r+ ++++
   Q: 112  HDAPIKEIAWiPEmSLLATGSLDKTVKYWDTRQSNPVH 149
           899999*****9999****************9998877 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSFGAANTN TNPNKSYEVS QPPTDSISSL SFSPKANFLV ATSWDNQVRC WEIAKNGTVV 60
TSTPKASISH DQPVLCSAWK DDGTTVFSGG CDKQAKMWPL LSGGQPVTVA MHDAPIKEIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAATTTT ATTTTTTCAA AAAGAAAAAA AGAAAAAACC CTAACCCCAC CTTTACTCTG 60
CGATTTTGAA TTCTCCATTT CCCGTTCGTT CGTCAAAGCT ACCTCTGAAC TGAAACTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_8g068875

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	75.00	6.00e-159	552.00
IUUC-Aml-002179	Ailuropoda melanoleuca	51.00	6.00e-95	340.00
IUUC-Apl-003637	Anas platyrhynchos	51.00	1.00e-95	342.00
IUUC-Aca-005042	Anolis carolinensis	50.43	1.00e-93	335.00
IUUC-Aly-006015	Arabidopsis lyrata	84.24	0.00e+00	635.00
IUUC-Ath-007659	Arabidopsis thaliana	83.67	0.00e+00	632.00
IUUC-Acl-008030	Aspergillus clavatus	48.27	3.00e-86	311.00
IUUC-Afl-008636	Aspergillus flavus	48.84	5.00e-87	313.00
IUUC-Afu-009121	Aspergillus fumigatus	48.84	1.00e-86	312.00
IUUC-Ani-009238	Aspergillus nidulans	46.82	4.00e-84	304.00
IUUC-Ang-009801	Aspergillus niger	47.99	5.00e-87	313.00
IUUC-Aor-009974	Aspergillus oryzae	48.84	5.00e-87	313.00
IUUC-Ate-010406	Aspergillus terreus	48.27	4.00e-87	314.00
IUUC-Ame-011368	Astyanax mexicanus	50.14	7.00e-94	336.00
IUUC-Bgr-012233	Blumeria graminis	44.07	1.00e-76	279.00
IUUC-Bta-012856	Bos taurus	51.00	6.00e-95	340.00
IUUC-Bdi-015050	Brachypodium distachyon	77.59	4.00e-160	556.00
IUUC-Bol-015367	Brassica oleracea	82.76	1.00e-179	621.00
IUUC-Bra-016903	Brassica rapa	82.76	1.00e-179	621.00
IUUC-Cel-018563	Caenorhabditis elegans	38.62	1.00e-61	229.00
IUUC-Cja-019700	Callithrix jacchus	51.29	2.00e-95	342.00
IUUC-Cfa-020337	Canis familiaris	51.29	3.00e-95	340.00
IUUC-Cpo-021858	Cavia porcellus	51.58	5.00e-96	343.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	53.37	6.00e-105	373.00
IUUC-Csa-023322	Chlorocebus sabaeus	51.00	7.00e-95	340.00
IUUC-Cin-025393	Ciona intestinalis	48.03	2.00e-88	318.00
IUUC-Csv-026093	Ciona savignyi	47.46	2.00e-88	318.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	37.22	4.00e-56	210.00
IUUC-Cne-026774	Cryptococcus neoformans	41.67	3.00e-66	244.00
IUUC-Cme-027243	Cyanidioschyzon merolae	41.55	2.00e-76	278.00
IUUC-Dre-028159	Danio rerio	50.72	5.00e-95	340.00
IUUC-Dno-028852	Dasypus novemcinctus	51.29	3.00e-95	340.00
IUUC-Dse-031161	Dothistroma septosporum	44.35	2.00e-73	268.00
IUUC-Eca-033306	Equus caballus	51.00	1.00e-94	338.00
IUUC-Fca-035579	Felis catus	51.29	3.00e-95	340.00
IUUC-Fal-037582	Ficedula albicollis	51.29	5.00e-96	343.00
IUUC-Fox-037772	Fusarium oxysporum	46.36	2.00e-81	295.00
IUUC-Fso-038368	Fusarium solani	45.48	2.00e-78	285.00
IUUC-Gmo-038500	Gadus morhua	50.14	2.00e-93	335.00
IUUC-Ggr-040019	Gaeumannomyces graminis	45.05	1.00e-79	289.00
IUUC-Gga-040684	Gallus gallus	51.29	1.00e-95	342.00
IUUC-Gac-042592	Gasterosteus aculeatus	51.30	2.00e-95	341.00
IUUC-Gma-043683	Glycine max	91.09	0.00e+00	682.00
IUUC-Ggo-044965	Gorilla gorilla	51.29	3.00e-95	340.00
IUUC-Hsa-046779	Homo sapiens	52.19	3.00e-91	328.00
IUUC-Hvu-047380	Hordeum vulgare	78.45	9.00e-163	565.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	51.00	1.00e-94	338.00
IUUC-Lch-050559	Latimeria chalumnae	45.48	5.00e-84	303.00
IUUC-Lpe-051050	Leersia perrieri	80.46	5.00e-173	599.00
IUUC-Loc-052874	Lepisosteus oculatus	50.72	1.00e-94	339.00
IUUC-Lma-053085	Leptosphaeria maculans	40.62	1.00e-68	253.00
IUUC-Laf-053980	Loxodonta africana	51.29	4.00e-95	340.00
IUUC-Mcc-055408	Macaca mulatta	51.29	2.00e-95	342.00
IUUC-Meu-056551	Macropus eugenii	46.33	2.00e-79	288.00
IUUC-Mor-057248	Magnaporthe oryzae	44.92	1.00e-85	308.00
IUUC-Mpo-057390	Magnaporthe poae	45.05	1.00e-79	289.00
IUUC-Mla-059155	Melampsora laricipopulina	43.50	6.00e-91	327.00
IUUC-Mvi-060311	Microbotryum violaceum	46.63	7.00e-86	309.00
IUUC-Mmr-061533	Microcebus murinus	51.58	8.00e-96	343.00
IUUC-Mdo-062593	Monodelphis domestica	50.72	2.00e-94	338.00
IUUC-Mmu-063362	Mus musculus	51.29	3.00e-95	341.00
IUUC-Mac-064968	Musa acuminata	74.60	4.00e-160	556.00
IUUC-Mpu-065722	Mustela putorius furo	51.00	3.00e-95	341.00
IUUC-Mlu-068124	Myotis lucifugus	51.00	8.00e-95	339.00
IUUC-Nfi-068595	Neosartorya fischeri	49.13	8.00e-87	313.00
IUUC-Ncr-068790	Neurospora crassa	45.35	3.00e-82	297.00
IUUC-Nle-069395	Nomascus leucogenys	42.41	3.00e-68	251.00
IUUC-Opr-070320	Ochotona princeps	46.99	3.00e-82	297.00
IUUC-Ont-071303	Oreochromis niloticus	51.30	1.00e-95	342.00
IUUC-Oan-073724	Ornithorhynchus anatinus	51.00	4.00e-95	340.00
IUUC-Ocu-074961	Oryctolagus cuniculus	52.01	8.00e-92	329.00
IUUC-Oba-075879	Oryza barthii	80.42	3.00e-165	574.00
IUUC-Obr-076326	Oryza brachyantha	79.02	9.00e-171	592.00
IUUC-Ogl-077767	Oryza glaberrima	79.54	1.00e-171	594.00
IUUC-Oin-080219	Oryza indica	79.54	1.00e-171	594.00
IUUC-Olo-081007	Oryza longistaminata	79.54	1.00e-171	594.00
IUUC-Oni-082844	Oryza nivara	79.54	1.00e-171	594.00
IUUC-Opu-083511	Oryza punctata	74.73	1.00e-166	578.00
IUUC-Oru-085012	Oryza rufipogon	79.54	1.00e-171	594.00
IUUC-Osa-085287	Oryza sativa	79.54	1.00e-171	594.00
IUUC-Ola-087292	Oryzias latipes	51.59	5.00e-96	343.00
IUUC-Olu-087689	Ostreococcus lucimarinus	59.60	4.00e-123	433.00
IUUC-Oga-088821	Otolemur garnettii	51.29	3.00e-95	340.00
IUUC-Oar-090253	Ovis aries	51.29	3.00e-95	340.00
IUUC-Ptr-091097	Pan troglodytes	51.00	7.00e-95	340.00
IUUC-Pan-091835	Papio anubis	51.29	2.00e-95	342.00
IUUC-Psi-093000	Pelodiscus sinensis	50.28	7.00e-95	339.00
IUUC-Pma-094273	Petromyzon marinus	51.69	1.00e-95	342.00
IUUC-Ppa-095202	Physcomitrella patens	75.19	7.00e-120	422.00
IUUC-Pfo-096388	Poecilia formosa	51.59	4.00e-96	343.00
IUUC-Pab-097533	Pongo abelii	51.29	2.00e-95	342.00
IUUC-Pop-099348	Populus trichocarpa	86.25	7.00e-178	615.00
IUUC-Ppe-101817	Prunus persica	85.03	2.00e-178	617.00
IUUC-Pva-102233	Pteropus vampyrus	51.00	3.00e-95	341.00
IUUC-Pgr-103342	Puccinia graminis	46.46	3.00e-91	327.00
IUUC-Ptt-103836	Puccinia triticina	46.18	1.00e-90	326.00
IUUC-Rno-105548	Rattus norvegicus	51.00	6.00e-95	340.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	48.23	7.00e-84	303.00
IUUC-Spo-108293	Schizosaccharomyces pombe	46.91	3.00e-89	321.00
IUUC-Smo-109568	Selaginella moellendorffii	70.86	4.00e-154	536.00
IUUC-Sit-110521	Setaria italica	79.34	2.00e-165	574.00
IUUC-Sly-111037	Solanum lycopersicum	81.48	9.00e-179	618.00
IUUC-Sbi-113852	Sorghum bicolor	78.57	3.00e-165	573.00
IUUC-Sre-114922	Sporisorium reilianum	37.23	2.00e-60	225.00
IUUC-Ssc-116305	Sus scrofa	51.29	3.00e-95	340.00
IUUC-Tgu-116751	Taeniopygia guttata	51.29	8.00e-96	343.00
IUUC-Tru-117798	Takifugu rubripes	51.59	7.00e-97	346.00
IUUC-Tsy-119523	Tarsius syrichta	51.79	2.00e-80	291.00
IUUC-Tni-120477	Tetraodon nigroviridis	51.29	2.00e-95	342.00
IUUC-Tca-121802	Theobroma cacao	84.57	0.00e+00	639.00
IUUC-Tre-121994	Trichoderma reesei	46.41	8.00e-80	290.00
IUUC-Tvi-122631	Trichoderma virens	45.88	4.00e-79	287.00
IUUC-Tae-125786	Triticum aestivum	78.45	7.00e-162	562.00
IUUC-Tme-127152	Tuber melanosporum	47.77	6.00e-82	296.00
IUUC-Tbe-127319	Tupaia belangeri	44.81	6.00e-49	187.00
IUUC-Ttr-129207	Tursiops truncatus	50.72	1.00e-94	339.00
IUUC-Uma-129342	Ustilago maydis	38.12	8.00e-56	210.00
IUUC-Vda-129865	Verticillium dahliae	44.19	2.00e-80	291.00
IUUC-Vpa-130076	Vicugna pacos	45.78	3.00e-70	257.00
IUUC-Vvi-131104	Vitis vinifera	86.74	0.00e+00	651.00
IUUC-Xtr-132917	Xenopus tropicalis	42.66	8.00e-68	249.00
IUUC-Xma-133615	Xiphophorus maculatus	51.30	1.00e-95	342.00
IUUC-Zma-135142	Zea mays	72.83	1.00e-157	548.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence