iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005575

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_891289

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_104083.1	scaffold_104083.1	scaffold_104083.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	28.8	223	264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+e+f    d    lpC+H++h+dC+  w       + + +CP+Cr
   Q: 223  CTVCMEEFivgGD-ATELPCKHIYHKDCIIPW------LRLHNSCPICR 264
           9*******88855.445***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSLSRPITRT DGASNGAFRT FGLYWCYHCN RMVRIASSNP SEIACPRCLR QFVVEIETRR 60
PRFTLNHAAP PFDASPEARL LEALSLMFEP AIIGGFGADP FLRARSRNIL EPESRPRPQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATAACAAT TCCTTCCAAC AATGTCATTG AGTCGGCCCA TAACACGGAC CGATGGTGCA 60
TCCAATGGAG CATTTAGGAC TTTTGGTCTC TACTGGTGCT ACCATTGTAA TCGTATGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_891289

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007502	Arabidopsis thaliana	89.60	1.00e-161	561.00
IUUC-Ago-007863	Ashbya gossypii	62.07	2.00e-08	53.10
IUUC-Bci-013958	Botrytis cinerea	35.78	1.00e-14	74.30
IUUC-Bol-015704	Brassica oleracea	74.29	1.00e-128	451.00
IUUC-Bra-017295	Brassica rapa	74.70	4.00e-122	429.00
IUUC-Cel-018216	Caenorhabditis elegans	45.31	3.00e-13	68.20
IUUC-Gma-043875	Glycine max	41.41	2.00e-45	176.00
IUUC-Lpe-050770	Leersia perrieri	59.14	7.00e-27	114.00
IUUC-Mor-057098	Magnaporthe oryzae	46.88	5.00e-15	75.50
IUUC-Mtr-058568	Medicago truncatula	42.06	5.00e-58	217.00
IUUC-Ome-081492	Oryza meridionalis	60.82	4.00e-30	124.00
IUUC-Pma-094408	Petromyzon marinus	43.97	2.00e-24	105.00
IUUC-Pop-099002	Populus trichocarpa	47.20	4.00e-64	237.00
IUUC-Ppe-101439	Prunus persica	44.66	2.00e-61	229.00
IUUC-Pgr-103273	Puccinia graminis	34.51	3.00e-16	78.60
IUUC-Spo-108354	Schizosaccharomyces pombe	37.80	3.00e-20	92.40
IUUC-Sly-111021	Solanum lycopersicum	39.68	7.00e-55	206.00
IUUC-Stu-112558	Solanum tuberosum	40.61	2.00e-55	208.00
IUUC-Tca-121535	Theobroma cacao	45.75	3.00e-63	234.00
IUUC-Vvi-131080	Vitis vinifera	42.90	3.00e-60	224.00
IUUC-Xma-132998	Xiphophorus maculatus	42.42	2.00e-25	108.00
IUUC-Zma-135464	Zea mays	63.37	8.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence