iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126025

Ensembl Protein ID

TRIUR3_08047-P1

UniProt Accession

M7Z4Q9; M7Z4Q9_TRIUA

Genbank Protein ID

EMS54972.1

Protein Name

Polyubiquitin-A

Genbank Nucleotide ID

KD175940

Gene Name

TRIUR3_08047

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_08047	TRIUR3_08047-T1	TRIUR3_08047-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	6.00e-287	927.5	591	666
ULD/UDP/UBQ/UBQ_PIM	6.60e-195	632.3	591	663

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 591  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 666
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 591  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 663
           99********************************************************************986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MAPELANLLI DLTEPRHGAV LSSTSSTTAG RIRLHQPPPA LPSAGSSRPR LDPSLRVLLR 60
ASSPASPLEC PSTMALVDLL CGETASAATS LYGPRKPRPS RAVRPPQHTT EPAQHPAFGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCCCG AGCTAGCTAA CCTGCTCATC GACCTCACCG TGAGCACTCG AATATTTTCC 60
CCCTAACGCC ATTGTAACGC CCCGAGACCG TTGCGCCAGG TGTCTTCCAG TTATTCGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006562	Arabidopsis lyrata	96.24	0.00e+00	1014.00
IUUC-Ath-006600	Arabidopsis thaliana	99.78	0.00e+00	905.00
IUUC-Ago-007937	Ashbya gossypii	97.37	0.00e+00	744.00
IUUC-Acl-008108	Aspergillus clavatus	97.37	7.00e-172	595.00
IUUC-Afl-008740	Aspergillus flavus	97.37	4.00e-172	595.00
IUUC-Afu-009031	Aspergillus fumigatus	94.25	3.00e-169	586.00
IUUC-Ani-009444	Aspergillus nidulans	97.37	2.00e-171	593.00
IUUC-Ang-009646	Aspergillus niger	97.37	3.00e-171	592.00
IUUC-Aor-009964	Aspergillus oryzae	97.37	4.00e-172	595.00
IUUC-Ate-010298	Aspergillus terreus	97.37	4.00e-172	595.00
IUUC-Bci-013832	Botrytis cinerea	98.69	6.00e-174	602.00
IUUC-Bdi-015013	Brachypodium distachyon	100.00	0.00e+00	756.00
IUUC-Bol-015598	Brassica oleracea	99.78	0.00e+00	905.00
IUUC-Cel-018571	Caenorhabditis elegans	95.86	0.00e+00	1026.00
IUUC-Cin-025600	Ciona intestinalis	96.06	0.00e+00	740.00
IUUC-Csv-026265	Ciona savignyi	94.56	0.00e+00	1021.00
IUUC-Cne-026938	Cryptococcus neoformans	98.69	0.00e+00	900.00
IUUC-Dre-028321	Danio rerio	95.87	0.00e+00	1015.00
IUUC-Dme-031690	Drosophila melanogaster	96.05	0.00e+00	1016.00
IUUC-Fso-038454	Fusarium solani	97.70	5.00e-173	598.00
IUUC-Ggr-040118	Gaeumannomyces graminis	97.38	1.00e-172	597.00
IUUC-Gac-042568	Gasterosteus aculeatus	95.69	0.00e+00	1010.00
IUUC-Gma-043881	Glycine max	100.00	0.00e+00	1055.00
IUUC-Hsa-046405	Homo sapiens	96.05	0.00e+00	1014.00
IUUC-Hvu-047805	Hordeum vulgare	33.98	8.00e-40	156.00
IUUC-Kpa-049199	Komagataella pastoris	97.37	3.00e-172	596.00
IUUC-Lma-053015	Leptosphaeria maculans	96.14	7.00e-173	598.00
IUUC-Mcc-055561	Macaca mulatta	95.69	0.00e+00	1016.00
IUUC-Mor-056991	Magnaporthe oryzae	97.38	1.00e-172	597.00
IUUC-Mpo-057384	Magnaporthe poae	97.38	1.00e-172	597.00
IUUC-Mtr-058240	Medicago truncatula	99.81	0.00e+00	1056.00
IUUC-Mla-058957	Melampsora laricipopulina	99.62	0.00e+00	1053.00
IUUC-Mdo-062630	Monodelphis domestica	96.05	0.00e+00	1015.00
IUUC-Mmu-063593	Mus musculus	95.87	0.00e+00	1016.00
IUUC-Mac-065145	Musa acuminata	90.20	1.00e-73	267.00
IUUC-Nfi-068475	Neosartorya fischeri	97.37	7.00e-172	595.00
IUUC-Ncr-068770	Neurospora crassa	97.38	3.00e-171	592.00
IUUC-Oba-075152	Oryza barthii	34.97	2.00e-43	168.00
IUUC-Obr-076236	Oryza brachyantha	100.00	0.00e+00	907.00
IUUC-Ogl-077274	Oryza glaberrima	94.49	0.00e+00	703.00
IUUC-Oin-079920	Oryza indica	100.00	0.00e+00	1056.00
IUUC-Ome-081397	Oryza meridionalis	34.31	8.00e-42	163.00
IUUC-Oni-082299	Oryza nivara	33.99	4.00e-42	164.00
IUUC-Osa-085789	Oryza sativa	100.00	0.00e+00	1058.00
IUUC-Ola-087192	Oryzias latipes	94.60	0.00e+00	984.00
IUUC-Olu-087888	Ostreococcus lucimarinus	100.00	0.00e+00	754.00
IUUC-Oar-089386	Ovis aries	91.22	0.00e+00	938.00
IUUC-Pan-092134	Papio anubis	95.84	0.00e+00	871.00
IUUC-Psi-093239	Pelodiscus sinensis	74.12	4.00e-179	619.00
IUUC-Pma-094556	Petromyzon marinus	95.29	0.00e+00	761.00
IUUC-Ppa-095548	Physcomitrella patens	98.68	0.00e+00	1042.00
IUUC-Pab-097884	Pongo abelii	95.87	0.00e+00	1014.00
IUUC-Pop-099396	Populus trichocarpa	100.00	0.00e+00	754.00
IUUC-Ppe-102064	Prunus persica	99.78	0.00e+00	906.00
IUUC-Pgr-103301	Puccinia graminis	100.00	0.00e+00	1055.00
IUUC-Ptt-103710	Puccinia triticina	100.00	7.00e-175	605.00
IUUC-Rno-105199	Rattus norvegicus	96.05	0.00e+00	1016.00
IUUC-Sce-106142	Saccharomyces cerevisiae	97.37	0.00e+00	743.00
IUUC-Sja-107825	Schizosaccharomyces japonicus	97.37	0.00e+00	743.00
IUUC-Spo-108219	Schizosaccharomyces pombe	97.11	0.00e+00	744.00
IUUC-Ssl-108565	Sclerotinia sclerotiorum	98.69	1.00e-173	600.00
IUUC-Smo-109259	Selaginella moellendorffii	98.50	0.00e+00	1043.00
IUUC-Sit-109965	Setaria italica	100.00	0.00e+00	1056.00
IUUC-Sly-111224	Solanum lycopersicum	100.00	0.00e+00	1055.00
IUUC-Stu-112256	Solanum tuberosum	100.00	0.00e+00	1055.00
IUUC-Sbi-114776	Sorghum bicolor	100.00	0.00e+00	890.00
IUUC-Ssc-115672	Sus scrofa	95.68	0.00e+00	1011.00
IUUC-Tca-120959	Theobroma cacao	99.56	0.00e+00	903.00
IUUC-Tre-122012	Trichoderma reesei	97.38	1.00e-172	597.00
IUUC-Tvi-122369	Trichoderma virens	97.38	1.00e-172	597.00
IUUC-Tae-123654	Triticum aestivum	100.00	0.00e+00	907.00
IUUC-Tme-127032	Tuber melanosporum	97.37	3.00e-172	596.00
IUUC-Ttr-128311	Tursiops truncatus	95.61	0.00e+00	867.00
IUUC-Uma-129417	Ustilago maydis	98.68	0.00e+00	898.00
IUUC-Vvi-130874	Vitis vinifera	100.00	0.00e+00	1052.00
IUUC-Xtr-132052	Xenopus tropicalis	95.50	0.00e+00	1010.00
IUUC-Yli-134420	Yarrowia lipolytica	97.37	0.00e+00	893.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence