iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115930

Ensembl Protein ID

ENSSSCP00000022748.1

UniProt Accession

I3LFA8; I3LFA8_PIG

Genbank Protein ID

ENSSSCP00000022748

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU914671

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000030612.1	ENSSSCT00000028290.1	ENSSSCP00000022748.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-31	107.2	167	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+++v+ +a+ +  +ll+sGs+D t ++W+l+
   Q: 167  GHESEVFICAWnPVsDLLASGSGDSTARIWNLS 199
           8**********94459***************86 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSISSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GALVPPAALI SIIQKGLQYV 60
EAEVSINEDG TLFDGRPIES LSLIDAVMPD VVQTRQQAYR DKLAQQQAAA AAAAAAATNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTATAA GCAGTGATGA GGTCAACTTC TTGGTATATA GATACTTGCA AGAGTCAGGT 60
GAGTACTTTC ATAAAGTAAA TAGGCCTCAA ATTATTTTAA TATTCTCAAA ATAACCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024872	Choloepus hoffmanni	99.57	4.00e-113	401.00
IUUC-Oan-073627	Ornithorhynchus anatinus	99.47	0.00e+00	710.00
IUUC-Oin-079515	Oryza indica	44.57	5.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence