iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111880

Ensembl Protein ID

Solyc09g065290.2.1

UniProt Accession

K4CUF6; K4CUF6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g065290.2	Solyc09g065290.2.1	Solyc09g065290.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-56	184.9	152	190
UBD/Beta-Prp	7.90e-76	255.8	26	313

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +vt+++f  d  l+vsGs+Dg++k+WD+ +g +lk+
   Q: 152  HSMPVTSVHFnKDgSLIVSGSHDGSCKIWDMASGACLKT 190
           8889******96669********************9986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           h+  ++cvkf+++++l+a++s d+t++vw+++t + l++l gh+++v+++++s+d++++ ++s+Drt+++wd +t + v tl+gh+  v +
   Q: 26   HTRAVSCVKFANNGQLFASASLDKTLIVWSTQTLTQLSRLVGHSEGVSDLSWSSDSSYICSASDDRTLRIWDARTAESVKTLRGHTGFVFC 116
           5667788************************************************************************************ PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           ++f+p+++ +vsGs d+t rvwd++tg+ ++   + h+  v++v++++dg+l+vsGs D+ +++Wd+++g +l+tl  ++ ++v   +f++
   Q: 117  VNFNPQSNLIVSGSFDETFRVWDVKTGKPIH-AIKAHSMPVTSVHFNKDGSLIVSGSHDGSCKIWDMASGACLKTLIDDKVPAVSFAKFSP 206
           *******************************.9999****************************************998999999999*** PP
   S: 191  ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdn 278
           ngk+++ + ld+t+klw+++tg+ ++++ gh + v+++  +    n++++vsgs+D+ +++Wdl+ ++ll+++++h ++visv++ ++ +n
   Q: 207  NGKFILVATLDNTLKLWNYSTGKFIKSYAGHVNRVYCITSTfsvTNGKYIVSGSEDQCVYVWDLQGKNLLQKFEGHTDTVISVCC-HPIEN 296
           **************************************988889*****************************************.66677 PP
   S: 279  vlvlgse..dskvniwk 293
           ++++++   d +v+iw 
   Q: 297  MILSAGLdnDRTVRIWV 313
           77776665899*****5 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MANNNNNQPT TPPYLPYRQR KVLTGHTRAV SCVKFANNGQ LFASASLDKT LIVWSTQTLT 60
QLSRLVGHSE GVSDLSWSSD SSYICSASDD RTLRIWDART AESVKTLRGH TGFVFCVNFN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGTAATTT TATTGATTAA CGTGGAGAAA CTATACACGT ATACTAAATT AGTATATAGT 60
ATATGGATTT TCCTACTCGT TAGTCGTAAC AAAAACTGAT AACAAATCTG TGCAAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101258184

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000502	Aegilops tauschii	63.76	3.00e-102	363.00
IUUC-Atr-002924	Amborella trichopoda	74.18	5.00e-122	429.00
IUUC-Aly-005655	Arabidopsis lyrata	72.79	3.00e-128	450.00
IUUC-Ath-007545	Arabidopsis thaliana	72.13	1.00e-127	448.00
IUUC-Bol-015533	Brassica oleracea	71.71	2.00e-123	434.00
IUUC-Bra-017641	Brassica rapa	71.38	2.00e-123	434.00
IUUC-Cne-027037	Cryptococcus neoformans	32.21	5.00e-31	128.00
IUUC-Gma-042658	Glycine max	75.17	2.00e-132	464.00
IUUC-Mtr-058429	Medicago truncatula	76.83	6.00e-131	459.00
IUUC-Oba-075292	Oryza barthii	65.46	7.00e-112	395.00
IUUC-Obr-076723	Oryza brachyantha	65.03	2.00e-108	384.00
IUUC-Ogl-077247	Oryza glaberrima	63.78	1.00e-110	391.00
IUUC-Ogu-078143	Oryza glumaepatula	62.97	5.00e-110	389.00
IUUC-Oin-080203	Oryza indica	62.97	3.00e-110	390.00
IUUC-Ome-082003	Oryza meridionalis	63.38	4.00e-110	390.00
IUUC-Oni-082216	Oryza nivara	62.97	3.00e-110	390.00
IUUC-Oru-084935	Oryza rufipogon	62.78	7.00e-110	389.00
IUUC-Osa-085444	Oryza sativa	62.97	5.00e-110	389.00
IUUC-Pma-094749	Petromyzon marinus	35.23	3.00e-39	155.00
IUUC-Pop-099988	Populus trichocarpa	77.12	9.00e-138	481.00
IUUC-Ppe-101291	Prunus persica	77.85	5.00e-140	489.00
IUUC-Stu-112051	Solanum tuberosum	97.14	3.00e-166	576.00
IUUC-Sbi-113874	Sorghum bicolor	65.91	2.00e-113	401.00
IUUC-Tsy-118828	Tarsius syrichta	34.12	2.00e-38	153.00
IUUC-Tca-121324	Theobroma cacao	75.32	6.00e-132	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence