iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002701

Ensembl Protein ID

ERM99504

UniProt Accession

W1NXT8; W1NXT8_AMBTC

Genbank Protein ID

ERM99504.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI394998

Gene Name

AMTR_s00088p00040490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00088p00040490	ERM99504	ERM99504

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.1	143	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh+dC+  w         + +CPlCr
   Q: 143  CAVCLCEFgsEDKLRLLPnCSHAFHLDCIDTW------LLSHSTCPLCR 185
           ********99666*******************......89999*****8 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSWVFSESKR SLISSFIPPS PPPQPEVFHG FLHQNQLNPS PYNFQKEQST SKISPAVLFI 60
IVILAVVFFI SGLLHLLVRF LLRPQSPSPR EPELSDSANT FQGQLQQLFN LHDSGVDQAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTGGG TTTTCTCAGA AAGCAAGCGA AGCTTAATCT CAAGCTTCAT CCCTCCTAGC 60
CCACCTCCTC AACCAGAGGT CTTTCATGGC TTCCTCCACC AAAACCAGTT GAACCCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

atr:18427539

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000392	Aegilops tauschii	47.37	4.00e-49	186.00
IUUC-Aca-004373	Anolis carolinensis	45.07	3.00e-14	72.80
IUUC-Aly-006330	Arabidopsis lyrata	46.74	2.00e-57	214.00
IUUC-Ath-006995	Arabidopsis thaliana	46.03	7.00e-60	223.00
IUUC-Bdi-014382	Brachypodium distachyon	46.18	3.00e-55	207.00
IUUC-Bol-015919	Brassica oleracea	48.60	2.00e-60	224.00
IUUC-Bra-017741	Brassica rapa	47.90	9.00e-61	226.00
IUUC-Cin-025111	Ciona intestinalis	51.85	1.00e-12	65.50
IUUC-Ete-032463	Echinops telfairi	45.71	8.00e-14	70.10
IUUC-Gma-042866	Glycine max	45.83	7.00e-61	226.00
IUUC-Hvu-047144	Hordeum vulgare	46.89	2.00e-56	211.00
IUUC-Lpe-051339	Leersia perrieri	47.52	9.00e-60	223.00
IUUC-Mtr-057863	Medicago truncatula	44.75	3.00e-55	207.00
IUUC-Mlu-068129	Myotis lucifugus	38.75	8.00e-14	70.90
IUUC-Nle-069076	Nomascus leucogenys	37.76	3.00e-13	67.40
IUUC-Oba-075878	Oryza barthii	45.00	4.00e-58	217.00
IUUC-Obr-076120	Oryza brachyantha	44.30	4.00e-65	240.00
IUUC-Ogl-077906	Oryza glaberrima	45.00	3.00e-58	217.00
IUUC-Ogu-078031	Oryza glumaepatula	45.00	4.00e-58	217.00
IUUC-Oin-080065	Oryza indica	47.29	3.00e-56	211.00
IUUC-Olo-080996	Oryza longistaminata	45.00	4.00e-58	217.00
IUUC-Ome-081784	Oryza meridionalis	45.00	3.00e-58	218.00
IUUC-Oni-082697	Oryza nivara	45.00	4.00e-58	217.00
IUUC-Opu-083782	Oryza punctata	46.45	1.00e-58	219.00
IUUC-Oru-084352	Oryza rufipogon	45.00	4.00e-58	217.00
IUUC-Osa-085627	Oryza sativa	45.00	4.00e-58	217.00
IUUC-Pma-094718	Petromyzon marinus	53.70	5.00e-13	67.40
IUUC-Pop-099808	Populus trichocarpa	45.36	7.00e-53	199.00
IUUC-Ppe-101995	Prunus persica	42.07	1.00e-49	189.00
IUUC-Sit-109828	Setaria italica	47.33	4.00e-60	224.00
IUUC-Sly-111633	Solanum lycopersicum	43.65	3.00e-57	214.00
IUUC-Stu-112810	Solanum tuberosum	43.69	6.00e-58	216.00
IUUC-Sbi-114772	Sorghum bicolor	47.84	4.00e-64	237.00
IUUC-Tca-121741	Theobroma cacao	47.45	8.00e-58	216.00
IUUC-Tae-124691	Triticum aestivum	47.06	8.00e-57	212.00
IUUC-Vvi-131093	Vitis vinifera	44.81	5.00e-47	180.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence