iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1713__AT3G15610.1	fgenesh2_kg.3__1713__AT3G15610.1	fgenesh2_kg.3__1713__AT3G15610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-26	90.3	268	298
UBD/Beta-Prp	1.90e-43	149.5	25	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWD 29
           gH ++v+c++f ++   + +sGs Dgti++W 
   Q: 268  GHHGPVHCVRFaPTgeSY-ASGSEDGTIRIWQ 298
           899*********554677.************6 PP

UBD/Beta-Prp

   S: 18   f..spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
              +pd+ +l+++s+d+   + + +tg+ + +++gh+++v++ ++++++   +++s D  +k+wd  tg+ +h+++ 
   Q: 25   SpiTPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE- 100
           255799999****************************************9**************************. PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           h++ v++++fs+++++l++G+  +++rv++l+      + +++   ++ + + +h+d+ +l s+++ + vrlWd+++
   Q: 101  HKHIVRACAFSQDTKSLITGGFEKILRVFNLNRLDAPPTeIDKSPGSIRTLAWLHGDQTILSSCTDIGGVRLWDMRS 177
           ******************************9998887774666666666666678888999999999********** PP
   S: 169  gkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           gk+++tl+   +++v+s +++++g+++ + ++ +tvk+wd  +
   Q: 178  GKIVQTLET--KSPVTSAEVSQDGRYITT-ADGSTVKFWDANH 217
           *******75..************977655.6789******875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEKKKVATPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET GDWIGTFEGH 60
KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE HKHIVRACAF SQDTKSLITG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATTTTCGG GAAGCAGCAT TTCCACTGGA GCTGCAATAA TCTTCCTATC AAAATTATAG 60
ATCGATCCAA GTTTTAGATT CGAGAAAATT TTTCTCCAAA TTTAGACTAA TATAAAATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

KEGG

aly:ARALYDRAFT_479012

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	80.29	3.00e-156	543.00
IUUC-Atr-002571	Amborella trichopoda	80.95	8.00e-160	555.00
IUUC-Ath-007376	Arabidopsis thaliana	97.36	0.00e+00	669.00
IUUC-Ani-009394	Aspergillus nidulans	39.51	1.00e-55	209.00
IUUC-Hvu-047544	Hordeum vulgare	80.29	2.00e-158	550.00
IUUC-Mac-065617	Musa acuminata	82.30	5.00e-162	562.00
IUUC-Pma-094255	Petromyzon marinus	48.46	3.00e-73	268.00
IUUC-Ppe-102035	Prunus persica	81.52	3.00e-158	550.00
IUUC-Sly-111555	Solanum lycopersicum	76.66	1.00e-154	538.00
IUUC-Stu-111953	Solanum tuberosum	77.23	9.00e-156	541.00
IUUC-Tca-121759	Theobroma cacao	79.94	3.00e-162	563.00
IUUC-Tre-122163	Trichoderma reesei	39.02	6.00e-48	183.00
IUUC-Tme-127137	Tuber melanosporum	45.39	4.00e-62	231.00
IUUC-Tbe-127324	Tupaia belangeri	37.04	5.00e-24	104.00
IUUC-Uma-129433	Ustilago maydis	45.63	3.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence