iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Spo-108314

UUCD1 version

UUC-ScP-00153

Ensembl Protein ID

SPAC4D7.05.1:pep

UniProt Accession

P79083; P78838; EIF3I_SCHPO

Genbank Protein ID

CAA70722.1; BAA13849.1; CAB11277.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog; Suppressor of uncontrolled mitosis 1

Genbank Nucleotide ID

Y09529; D89187; CU329670

Gene Name

sum1; eif3i; tif34; SPAC4D7.05

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC4D7.05	SPAC4D7.05.1	SPAC4D7.05.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	77.1	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ ++ ++   s+tl+vsG+ D+t+++WD++tg++l
   Q: 50   GHTGAIWTCDInkSSTLMVSGAADNTMRLWDVKTGKQL 87
           8**********9766********************987 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPIILQGHE RPLTQIKYNH DGDLLFSCAK DKVINVWFSH NGERLGTYEG HTGAIWTCDI 60
NKSSTLMVSG AADNTMRLWD VKTGKQLYKW EFPTAVKRVE FNEDDTRILA VTEERMGYAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTAATTAG AATCAAAATA TTACAACTAA AGACTTTTCG CTCAAACCCT CTACCAGCAC 60
TTTCCTGTTC AAAAGATGAG GCCTATCATT TTACAGGGTC ATGAGCGTCC TTTGACTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0539--Nucleus
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0034399--C:nuclear periphery
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0002183--P:cytoplasmic translational initiation
GO:0001732--P:formation of cytoplasmic translation initiation complex

KEGG

spo:SPAC4D7.05

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	49.53	2.00e-27	114.00
IUUC-Aml-001321	Ailuropoda melanoleuca	48.92	1.00e-91	327.00
IUUC-Atr-002468	Amborella trichopoda	45.45	1.00e-45	174.00
IUUC-Apl-003841	Anas platyrhynchos	49.23	7.00e-93	331.00
IUUC-Aca-005123	Anolis carolinensis	49.39	3.00e-94	335.00
IUUC-Aly-006532	Arabidopsis lyrata	45.12	7.00e-85	305.00
IUUC-Ath-007094	Arabidopsis thaliana	45.43	9.00e-86	308.00
IUUC-Ago-008000	Ashbya gossypii	51.35	1.00e-102	364.00
IUUC-Acl-008098	Aspergillus clavatus	61.26	1.00e-123	434.00
IUUC-Afl-008494	Aspergillus flavus	62.50	1.00e-128	450.00
IUUC-Afu-009080	Aspergillus fumigatus	61.26	5.00e-125	438.00
IUUC-Ani-009230	Aspergillus nidulans	62.01	5.00e-125	438.00
IUUC-Aor-010114	Aspergillus oryzae	62.50	1.00e-128	450.00
IUUC-Ate-010285	Aspergillus terreus	60.49	2.00e-124	436.00
IUUC-Ame-011534	Astyanax mexicanus	49.39	2.00e-93	333.00
IUUC-Bgr-012121	Blumeria graminis	61.70	5.00e-120	421.00
IUUC-Bta-013143	Bos taurus	49.08	3.00e-92	329.00
IUUC-Bci-013950	Botrytis cinerea	65.85	4.00e-133	465.00
IUUC-Bdi-015019	Brachypodium distachyon	45.73	2.00e-85	307.00
IUUC-Bol-015709	Brassica oleracea	44.07	1.00e-82	298.00
IUUC-Bra-017760	Brassica rapa	44.07	5.00e-83	300.00
IUUC-Cel-018226	Caenorhabditis elegans	37.27	3.00e-67	246.00
IUUC-Cja-019741	Callithrix jacchus	49.08	3.00e-92	329.00
IUUC-Cfa-021204	Canis familiaris	48.62	6.00e-91	325.00
IUUC-Cpo-021661	Cavia porcellus	49.23	4.00e-92	328.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	44.48	1.00e-84	304.00
IUUC-Csa-024038	Chlorocebus sabaeus	49.08	3.00e-92	329.00
IUUC-Cin-025597	Ciona intestinalis	47.58	5.00e-92	328.00
IUUC-Csv-026287	Ciona savignyi	25.87	9.00e-26	108.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	63.22	1.00e-127	446.00
IUUC-Cne-026838	Cryptococcus neoformans	51.52	4.00e-105	372.00
IUUC-Cme-027304	Cyanidioschyzon merolae	42.90	3.00e-73	266.00
IUUC-Dre-028567	Danio rerio	49.24	4.00e-94	335.00
IUUC-Dno-029171	Dasypus novemcinctus	48.62	6.00e-91	326.00
IUUC-Dor-030257	Dipodomys ordii	39.77	8.00e-33	132.00
IUUC-Dse-031191	Dothistroma septosporum	58.48	8.00e-115	404.00
IUUC-Dme-031879	Drosophila melanogaster	45.68	2.00e-86	310.00
IUUC-Ete-032336	Echinops telfairi	41.74	8.00e-44	167.00
IUUC-Eca-033259	Equus caballus	48.92	3.00e-91	326.00
IUUC-Eeu-035153	Erinaceus europaeus	38.93	1.00e-25	108.00
IUUC-Fca-036489	Felis catus	48.92	3.00e-91	326.00
IUUC-Fal-037485	Ficedula albicollis	49.54	2.00e-93	333.00
IUUC-Fox-037860	Fusarium oxysporum	63.41	3.00e-128	449.00
IUUC-Fso-038188	Fusarium solani	63.72	1.00e-127	447.00
IUUC-Gmo-039311	Gadus morhua	49.08	4.00e-92	328.00
IUUC-Ggr-040045	Gaeumannomyces graminis	63.22	4.00e-130	455.00
IUUC-Gga-040645	Gallus gallus	48.20	2.00e-91	327.00
IUUC-Gac-042086	Gasterosteus aculeatus	49.85	9.00e-91	324.00
IUUC-Gma-044098	Glycine max	45.09	6.00e-85	305.00
IUUC-Ggo-045578	Gorilla gorilla	49.08	3.00e-92	329.00
IUUC-Hsa-046734	Homo sapiens	49.08	3.00e-92	329.00
IUUC-Hvu-047553	Hordeum vulgare	45.43	1.00e-84	304.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	48.62	6.00e-91	325.00
IUUC-Kpa-049325	Komagataella pastoris	53.66	7.00e-110	388.00
IUUC-Lch-049620	Latimeria chalumnae	49.33	4.00e-83	299.00
IUUC-Lpe-051338	Leersia perrieri	44.55	2.00e-80	290.00
IUUC-Loc-052094	Lepisosteus oculatus	44.28	2.00e-79	286.00
IUUC-Lma-053047	Leptosphaeria maculans	59.88	2.00e-123	433.00
IUUC-Laf-053801	Loxodonta africana	48.59	2.00e-88	317.00
IUUC-Mcc-055498	Macaca mulatta	43.25	3.00e-71	259.00
IUUC-Meu-056729	Macropus eugenii	45.09	4.00e-83	299.00
IUUC-Mor-057025	Magnaporthe oryzae	62.50	8.00e-126	441.00
IUUC-Mpo-057511	Magnaporthe poae	64.33	1.00e-130	457.00
IUUC-Mtr-058051	Medicago truncatula	46.01	1.00e-86	310.00
IUUC-Mla-059061	Melampsora laricipopulina	53.99	2.00e-105	373.00
IUUC-Mga-059229	Meleagris gallopavo	48.93	7.00e-91	325.00
IUUC-Mvi-060399	Microbotryum violaceum	54.93	6.00e-107	378.00
IUUC-Mmr-060764	Microcebus murinus	49.08	1.00e-92	330.00
IUUC-Mdo-062088	Monodelphis domestica	48.00	2.00e-91	327.00
IUUC-Mmu-064304	Mus musculus	49.08	3.00e-92	329.00
IUUC-Mac-065520	Musa acuminata	45.17	6.00e-84	301.00
IUUC-Mpu-066340	Mustela putorius furo	48.92	3.00e-91	326.00
IUUC-Mlu-067111	Myotis lucifugus	48.92	1.00e-91	327.00
IUUC-Nfi-068478	Neosartorya fischeri	61.56	7.00e-126	441.00
IUUC-Ncr-068820	Neurospora crassa	61.35	4.00e-124	435.00
IUUC-Nle-069903	Nomascus leucogenys	48.92	1.00e-91	327.00
IUUC-Opr-070221	Ochotona princeps	48.47	7.00e-91	325.00
IUUC-Ont-071765	Oreochromis niloticus	49.54	3.00e-93	332.00
IUUC-Oan-073660	Ornithorhynchus anatinus	45.24	9.00e-77	277.00
IUUC-Ocu-074039	Oryctolagus cuniculus	48.92	2.00e-91	326.00
IUUC-Oba-075395	Oryza barthii	41.10	1.00e-72	263.00
IUUC-Obr-076334	Oryza brachyantha	43.87	7.00e-81	291.00
IUUC-Ogl-077751	Oryza glaberrima	46.32	3.00e-88	316.00
IUUC-Ogu-078207	Oryza glumaepatula	46.01	6.00e-88	315.00
IUUC-Oin-079878	Oryza indica	46.32	4.00e-88	315.00
IUUC-Olo-080677	Oryza longistaminata	40.26	6.00e-80	288.00
IUUC-Ome-081228	Oryza meridionalis	37.29	2.00e-41	159.00
IUUC-Oni-082411	Oryza nivara	41.10	1.00e-71	260.00
IUUC-Opu-083136	Oryza punctata	46.32	3.00e-88	316.00
IUUC-Oru-084916	Oryza rufipogon	45.37	1.00e-86	311.00
IUUC-Osa-085776	Oryza sativa	46.32	3.00e-88	316.00
IUUC-Ola-087053	Oryzias latipes	50.76	9.00e-95	337.00
IUUC-Olu-087602	Ostreococcus lucimarinus	43.52	5.00e-84	302.00
IUUC-Oga-088154	Otolemur garnettii	48.92	2.00e-91	327.00
IUUC-Oar-089915	Ovis aries	48.92	2.00e-91	327.00
IUUC-Ptr-091124	Pan troglodytes	40.92	2.00e-65	240.00
IUUC-Pan-092035	Papio anubis	49.08	3.00e-92	329.00
IUUC-Psi-094096	Pelodiscus sinensis	47.44	2.00e-55	206.00
IUUC-Pma-094255	Petromyzon marinus	25.00	2.00e-22	97.80
IUUC-Pno-094988	Phaeosphaeria nodorum	56.36	3.00e-107	379.00
IUUC-Ppa-095536	Physcomitrella patens	45.71	4.00e-85	305.00
IUUC-Pfo-096101	Poecilia formosa	50.15	1.00e-94	337.00
IUUC-Pab-097726	Pongo abelii	49.08	3.00e-92	329.00
IUUC-Pop-099617	Populus trichocarpa	44.79	2.00e-83	300.00
IUUC-Pca-101014	Procavia capensis	49.08	2.00e-92	330.00
IUUC-Ppe-101320	Prunus persica	44.17	4.00e-85	305.00
IUUC-Pva-102789	Pteropus vampyrus	44.79	4.00e-80	289.00
IUUC-Pgr-103479	Puccinia graminis	56.75	5.00e-109	385.00
IUUC-Ptt-103981	Puccinia triticina	56.13	2.00e-107	379.00
IUUC-Pte-104278	Pyrenophora teres	59.27	1.00e-119	420.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	59.27	1.00e-119	420.00
IUUC-Rno-105867	Rattus norvegicus	42.73	3.00e-75	273.00
IUUC-Sce-106251	Saccharomyces cerevisiae	52.08	8.00e-105	371.00
IUUC-Sha-107039	Sarcophilus harrisii	48.00	1.00e-91	327.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	79.88	1.00e-163	566.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	65.55	1.00e-132	463.00
IUUC-Smo-108728	Selaginella moellendorffii	43.56	7.00e-83	298.00
IUUC-Sit-110801	Setaria italica	46.01	9.00e-87	311.00
IUUC-Sly-111326	Solanum lycopersicum	46.01	7.00e-86	308.00
IUUC-Stu-112458	Solanum tuberosum	46.32	4.00e-86	308.00
IUUC-Sbi-114063	Sorghum bicolor	46.01	2.00e-86	310.00
IUUC-Sre-115096	Sporisorium reilianum	56.97	4.00e-105	372.00
IUUC-Ssc-116080	Sus scrofa	49.08	2.00e-92	329.00
IUUC-Tgu-116988	Taeniopygia guttata	49.23	5.00e-93	332.00
IUUC-Tru-118766	Takifugu rubripes	50.46	2.00e-94	336.00
IUUC-Tsy-119522	Tarsius syrichta	24.52	3.00e-15	73.90
IUUC-Tni-120197	Tetraodon nigroviridis	50.15	5.00e-94	335.00
IUUC-Tca-121316	Theobroma cacao	45.40	2.00e-85	306.00
IUUC-Tre-122097	Trichoderma reesei	62.61	3.00e-125	439.00
IUUC-Tvi-122442	Trichoderma virens	62.20	5.00e-125	438.00
IUUC-Tae-125800	Triticum aestivum	45.12	4.00e-84	302.00
IUUC-Tur-126334	Triticum urartu	39.27	4.00e-64	236.00
IUUC-Tme-127038	Tuber melanosporum	67.79	3.00e-137	479.00
IUUC-Ttr-128659	Tursiops truncatus	46.32	7.00e-74	268.00
IUUC-Uma-129464	Ustilago maydis	55.79	8.00e-104	367.00
IUUC-Vda-129841	Verticillium dahliae	65.14	7.00e-129	451.00
IUUC-Vpa-130382	Vicugna pacos	26.03	8.00e-21	92.40
IUUC-Vvi-131076	Vitis vinifera	46.63	6.00e-87	311.00
IUUC-Xtr-132395	Xenopus tropicalis	51.83	2.00e-96	343.00
IUUC-Xma-133383	Xiphophorus maculatus	50.15	1.00e-94	337.00
IUUC-Yli-134586	Yarrowia lipolytica	57.14	2.00e-106	376.00
IUUC-Zma-135904	Zea mays	47.24	2.00e-88	317.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence