iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oan-072839

UUCD1 version

UUC-OrA-00464

Ensembl Protein ID

ENSOANP00000001894.2

UniProt Accession

F7CAY8; F7CAY8_ORNAN

Protein Name

Uncharacterized protein

Gene Name

RBBP4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000001189.2	ENSOANT00000001895.2	ENSOANP00000001894.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-37	125.0	269	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 269  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 303
           **********96554568*************9875 PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

PAAFDDAVEE RVINEEYKIW KKNTPFLYDL VMTHALEWPS LTAQWLPDVT SRPEGKDFSI 60
HRLVLGTHTS DEQNHLVIAS VQLPNDDAQF DASHYDSEKG EFGGFGSVSG KIEIEIKINH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAGCAGCCT TTGATGATGC AGTAGAGGAA CGTGTGATCA ACGAAGAGTA TAAAATATGG 60
AAAAAAAACA CCCCCTTCCT CTACGACTTA GTGATGACCC ATGCCCTGGA GTGGCCAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0016589--C:NURF complex
GO:0008094--F:DNA-dependent ATPase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006336--P:DNA replication-independent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	60.14	7.00e-141	493.00
IUUC-Aml-001339	Ailuropoda melanoleuca	99.05	0.00e+00	849.00
IUUC-Atr-003075	Amborella trichopoda	68.14	8.00e-169	585.00
IUUC-Apl-003952	Anas platyrhynchos	99.76	0.00e+00	863.00
IUUC-Aca-004508	Anolis carolinensis	99.52	0.00e+00	862.00
IUUC-Ago-007892	Ashbya gossypii	38.52	3.00e-80	291.00
IUUC-Acl-008163	Aspergillus clavatus	53.15	5.00e-125	440.00
IUUC-Afl-008645	Aspergillus flavus	53.10	4.00e-124	437.00
IUUC-Afu-009091	Aspergillus fumigatus	53.40	3.00e-125	441.00
IUUC-Ani-009478	Aspergillus nidulans	48.61	1.00e-102	365.00
IUUC-Ang-009707	Aspergillus niger	52.64	1.00e-120	425.00
IUUC-Aor-010028	Aspergillus oryzae	53.10	4.00e-124	437.00
IUUC-Ate-010416	Aspergillus terreus	51.46	3.00e-124	437.00
IUUC-Ame-010598	Astyanax mexicanus	96.90	0.00e+00	843.00
IUUC-Bgr-012001	Blumeria graminis	49.64	4.00e-107	380.00
IUUC-Bta-012851	Bos taurus	99.76	0.00e+00	864.00
IUUC-Bci-013815	Botrytis cinerea	50.00	4.00e-124	437.00
IUUC-Bdi-014926	Brachypodium distachyon	67.89	6.00e-163	566.00
IUUC-Cel-018587	Caenorhabditis elegans	72.33	0.00e+00	630.00
IUUC-Cja-019884	Callithrix jacchus	99.76	0.00e+00	864.00
IUUC-Cfa-020343	Canis familiaris	99.76	0.00e+00	864.00
IUUC-Cpo-021591	Cavia porcellus	99.76	0.00e+00	864.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	62.75	6.00e-156	542.00
IUUC-Cho-024506	Choloepus hoffmanni	99.29	0.00e+00	855.00
IUUC-Cin-025589	Ciona intestinalis	89.55	0.00e+00	792.00
IUUC-Csv-026216	Ciona savignyi	91.02	0.00e+00	796.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	48.43	3.00e-117	414.00
IUUC-Cne-026792	Cryptococcus neoformans	55.75	1.00e-134	472.00
IUUC-Cme-027307	Cyanidioschyzon merolae	52.08	1.00e-127	449.00
IUUC-Dre-028742	Danio rerio	97.14	0.00e+00	844.00
IUUC-Dno-029114	Dasypus novemcinctus	99.76	0.00e+00	864.00
IUUC-Dse-031282	Dothistroma septosporum	47.29	3.00e-102	364.00
IUUC-Dme-032126	Drosophila melanogaster	91.71	0.00e+00	796.00
IUUC-Ete-032731	Echinops telfairi	99.76	0.00e+00	864.00
IUUC-Eca-033533	Equus caballus	98.34	0.00e+00	844.00
IUUC-Eeu-034644	Erinaceus europaeus	100.00	2.00e-130	458.00
IUUC-Fca-036202	Felis catus	99.76	0.00e+00	864.00
IUUC-Fal-037084	Ficedula albicollis	99.76	0.00e+00	863.00
IUUC-Fox-037974	Fusarium oxysporum	50.00	3.00e-122	431.00
IUUC-Fso-038246	Fusarium solani	48.20	1.00e-109	389.00
IUUC-Gmo-039214	Gadus morhua	97.13	0.00e+00	833.00
IUUC-Ggr-039741	Gaeumannomyces graminis	50.24	8.00e-118	416.00
IUUC-Gga-040396	Gallus gallus	99.76	0.00e+00	864.00
IUUC-Gac-041389	Gasterosteus aculeatus	95.94	0.00e+00	831.00
IUUC-Gma-042791	Glycine max	68.00	1.00e-162	565.00
IUUC-Ggo-045422	Gorilla gorilla	91.73	0.00e+00	773.00
IUUC-Hsa-045683	Homo sapiens	99.76	0.00e+00	864.00
IUUC-Hvu-047457	Hordeum vulgare	67.18	2.00e-76	277.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	99.76	0.00e+00	864.00
IUUC-Kpa-049119	Komagataella pastoris	37.10	5.00e-71	260.00
IUUC-Lpe-051337	Leersia perrieri	68.63	4.00e-164	570.00
IUUC-Loc-052473	Lepisosteus oculatus	97.62	0.00e+00	849.00
IUUC-Laf-054114	Loxodonta africana	99.76	0.00e+00	864.00
IUUC-Mcc-055648	Macaca mulatta	99.76	0.00e+00	862.00
IUUC-Meu-056490	Macropus eugenii	99.76	0.00e+00	864.00
IUUC-Mor-056947	Magnaporthe oryzae	50.84	2.00e-116	411.00
IUUC-Mpo-057602	Magnaporthe poae	49.52	5.00e-117	413.00
IUUC-Mtr-057853	Medicago truncatula	66.67	2.00e-160	557.00
IUUC-Mla-058884	Melampsora laricipopulina	52.54	6.00e-127	446.00
IUUC-Mga-059452	Meleagris gallopavo	99.76	0.00e+00	863.00
IUUC-Mvi-060450	Microbotryum violaceum	57.63	1.00e-136	478.00
IUUC-Mmr-060678	Microcebus murinus	99.75	0.00e+00	819.00
IUUC-Mdo-062450	Monodelphis domestica	99.25	0.00e+00	822.00
IUUC-Mmu-063282	Mus musculus	99.76	0.00e+00	864.00
IUUC-Mac-065480	Musa acuminata	67.08	5.00e-161	560.00
IUUC-Mpu-066529	Mustela putorius furo	98.81	0.00e+00	856.00
IUUC-Mlu-068072	Myotis lucifugus	99.76	0.00e+00	864.00
IUUC-Nfi-068374	Neosartorya fischeri	53.40	5.00e-122	430.00
IUUC-Nle-069577	Nomascus leucogenys	99.76	0.00e+00	864.00
IUUC-Opr-070245	Ochotona princeps	84.09	0.00e+00	682.00
IUUC-Ont-071809	Oreochromis niloticus	96.67	0.00e+00	841.00
IUUC-Ocu-074515	Oryctolagus cuniculus	93.82	0.00e+00	749.00
IUUC-Oba-075719	Oryza barthii	57.68	1.00e-136	479.00
IUUC-Obr-076859	Oryza brachyantha	67.97	4.00e-162	563.00
IUUC-Ogl-077920	Oryza glaberrima	67.89	2.00e-163	568.00
IUUC-Ogu-078048	Oryza glumaepatula	57.68	7.00e-136	477.00
IUUC-Oin-079960	Oryza indica	56.13	3.00e-124	438.00
IUUC-Olo-080553	Oryza longistaminata	55.33	2.00e-132	465.00
IUUC-Ome-081835	Oryza meridionalis	67.89	2.00e-164	572.00
IUUC-Oni-082494	Oryza nivara	57.45	4.00e-135	474.00
IUUC-Opu-083913	Oryza punctata	65.20	1.00e-152	531.00
IUUC-Oru-084666	Oryza rufipogon	67.89	2.00e-163	568.00
IUUC-Osa-085884	Oryza sativa	67.89	2.00e-163	568.00
IUUC-Ola-086664	Oryzias latipes	96.67	0.00e+00	840.00
IUUC-Olu-087579	Ostreococcus lucimarinus	63.52	7.00e-146	509.00
IUUC-Oga-088364	Otolemur garnettii	91.23	0.00e+00	786.00
IUUC-Oar-089652	Ovis aries	99.76	0.00e+00	864.00
IUUC-Psi-093300	Pelodiscus sinensis	99.74	0.00e+00	801.00
IUUC-Pma-094307	Petromyzon marinus	93.48	0.00e+00	809.00
IUUC-Pno-095153	Phaeosphaeria nodorum	49.25	2.00e-109	388.00
IUUC-Ppa-095800	Physcomitrella patens	68.00	2.00e-168	584.00
IUUC-Pfo-097376	Poecilia formosa	96.44	0.00e+00	837.00
IUUC-Pab-097697	Pongo abelii	99.76	0.00e+00	864.00
IUUC-Pop-099709	Populus trichocarpa	66.83	6.00e-165	573.00
IUUC-Pca-100642	Procavia capensis	89.50	0.00e+00	723.00
IUUC-Ppe-101212	Prunus persica	66.34	7.00e-164	569.00
IUUC-Pva-102253	Pteropus vampyrus	99.76	0.00e+00	864.00
IUUC-Pgr-103441	Puccinia graminis	54.08	6.00e-122	429.00
IUUC-Rno-105678	Rattus norvegicus	99.76	0.00e+00	864.00
IUUC-Sce-106364	Saccharomyces cerevisiae	38.00	2.00e-71	261.00
IUUC-Sha-106663	Sarcophilus harrisii	99.76	0.00e+00	863.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	47.68	1.00e-105	375.00
IUUC-Spo-108145	Schizosaccharomyces pombe	52.33	1.00e-119	422.00
IUUC-Smo-109159	Selaginella moellendorffii	65.29	4.00e-163	566.00
IUUC-Sit-110144	Setaria italica	67.83	2.00e-154	538.00
IUUC-Sly-111680	Solanum lycopersicum	67.33	4.00e-165	573.00
IUUC-Stu-111931	Solanum tuberosum	67.08	2.00e-163	567.00
IUUC-Sbi-114637	Sorghum bicolor	68.08	2.00e-161	561.00
IUUC-Sre-114980	Sporisorium reilianum	54.16	2.00e-136	478.00
IUUC-Ssc-115711	Sus scrofa	99.74	0.00e+00	801.00
IUUC-Tgu-116925	Taeniopygia guttata	99.52	0.00e+00	863.00
IUUC-Tru-117549	Takifugu rubripes	96.21	0.00e+00	832.00
IUUC-Tni-120398	Tetraodon nigroviridis	96.21	0.00e+00	835.00
IUUC-Tca-121841	Theobroma cacao	68.08	2.00e-164	571.00
IUUC-Tre-122190	Trichoderma reesei	50.24	3.00e-114	404.00
IUUC-Tvi-122304	Trichoderma virens	49.52	2.00e-122	431.00
IUUC-Tae-124648	Triticum aestivum	67.16	2.00e-154	538.00
IUUC-Tur-126850	Triticum urartu	53.98	1.00e-117	415.00
IUUC-Tme-126949	Tuber melanosporum	54.75	1.00e-128	452.00
IUUC-Uma-129424	Ustilago maydis	53.94	1.00e-136	478.00
IUUC-Vda-129873	Verticillium dahliae	49.76	6.00e-124	436.00
IUUC-Vpa-130079	Vicugna pacos	99.29	0.00e+00	858.00
IUUC-Vvi-131585	Vitis vinifera	67.08	3.00e-162	563.00
IUUC-Xma-133066	Xiphophorus maculatus	96.67	0.00e+00	841.00
IUUC-Yli-134334	Yarrowia lipolytica	39.57	7.00e-81	293.00
IUUC-Zma-135710	Zea mays	67.33	2.00e-154	538.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence