iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olu-087602

Ensembl Protein ID

ABO96658

UniProt Accession

A4RYC9; A4RYC9_OSTLU

Genbank Protein ID

ABO96658.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Genbank Nucleotide ID

CP000586

Gene Name

OSTLU_49739

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OSTLU_49739	ABO96658	ABO96658

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-22	74.9	50	86
UBD/Beta-Prp	1.20e-56	190.7	7	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ v+ ++  +d  +lv+Gs D t k+WD++tg +
   Q: 50   GHNGAVWTCDVsDDsSTLVTGSADTTAKLWDTKTGEC 86
           8**********866799*****************998 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.................. 131
           +ghe + t +k++++g++l t+++D++  +w  ++g+ v t+ gh+  v+++++s ++++lv+Gs+d t+++wd++tg+c+ +                  
   Q: 7    KGHERPLTFIKYNREGDLLFTCAKDHHPTLWYGDNGERVGTYVGHNGAVWTCDVSDDSSTLVTGSADTTAKLWDTKTGECYFTfefdqpvravalnaggtq 107
           45555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 PP
   S: 132  ..................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
                                               +g +g v+ v + p ++ +v+G+ D+++r Wd++tg++l+  ++ h +++++l ++++g +++s+
   Q: 108  caittdpfmgvpsaihivnvnlgdraaqrgevvkRIEGPQGRVTRVMWGPLNKTVVTGGEDGIIRSWDVETGDVLKMSQE-HSKQIQHLVMSDDGSHFISA 207
           555555555555555555555555555566665577788999**********************************9999.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlv 238
           sld+t k++d +t ec++t+ + + +v+   +sp  +++v
   Q: 208  SLDKTAKVFDSETLECLKTYSADR-PVNAAILSPIRDHIV 246
           ********************9865.555555554333333 PP

Organism

Ostreococcus lucimarinus

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLKGHE RPLTFIKYNR EGDLLFTCAK DHHPTLWYGD NGERVGTYVG HNGAVWTCDV 60
SDDSSTLVTG SADTTAKLWD TKTGECYFTF EFDQPVRAVA LNAGGTQCAI TTDPFMGVPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGAGGCCG CGCGCGCGCG AGCGACGCCG ACGGATCGAG CGACATGCGC CCCATCCTGC 60
TCAAGGGCCA CGAGCGCCCG CTGACGTTCA TCAAGTACAA CCGCGAGGGC GATCTGCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

olu:OSTLU_49739

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	63.72	2.00e-40	157.00
IUUC-Aml-001321	Ailuropoda melanoleuca	47.98	5.00e-89	318.00
IUUC-Atr-002468	Amborella trichopoda	60.21	4.00e-69	251.00
IUUC-Apl-003841	Anas platyrhynchos	48.29	1.00e-88	317.00
IUUC-Aca-005123	Anolis carolinensis	47.83	3.00e-89	319.00
IUUC-Aly-005473	Arabidopsis lyrata	58.72	2.00e-113	399.00
IUUC-Ath-007094	Arabidopsis thaliana	58.72	1.00e-114	404.00
IUUC-Ago-008000	Ashbya gossypii	41.34	3.00e-74	269.00
IUUC-Acl-008098	Aspergillus clavatus	46.20	3.00e-86	309.00
IUUC-Afl-008494	Aspergillus flavus	46.91	1.00e-88	317.00
IUUC-Afu-009080	Aspergillus fumigatus	47.11	6.00e-89	318.00
IUUC-Ani-009230	Aspergillus nidulans	46.77	2.00e-87	313.00
IUUC-Aor-010114	Aspergillus oryzae	46.91	1.00e-88	317.00
IUUC-Ate-010285	Aspergillus terreus	47.69	2.00e-88	316.00
IUUC-Ame-011534	Astyanax mexicanus	45.82	1.00e-87	313.00
IUUC-Bgr-012121	Blumeria graminis	44.92	1.00e-82	297.00
IUUC-Bta-013143	Bos taurus	48.45	4.00e-90	322.00
IUUC-Bci-013950	Botrytis cinerea	46.60	3.00e-91	325.00
IUUC-Bdi-015019	Brachypodium distachyon	59.38	2.00e-114	402.00
IUUC-Bol-015709	Brassica oleracea	60.79	1.00e-116	410.00
IUUC-Bra-017760	Brassica rapa	60.79	3.00e-117	413.00
IUUC-Cel-018226	Caenorhabditis elegans	43.17	4.00e-78	282.00
IUUC-Cja-019741	Callithrix jacchus	48.14	6.00e-90	321.00
IUUC-Cfa-021204	Canis familiaris	47.98	4.00e-89	318.00
IUUC-Cpo-021661	Cavia porcellus	47.66	7.00e-89	318.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	53.70	3.00e-102	362.00
IUUC-Csa-024038	Chlorocebus sabaeus	48.14	6.00e-90	321.00
IUUC-Cin-025597	Ciona intestinalis	48.15	3.00e-89	319.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	45.99	3.00e-84	302.00
IUUC-Cne-026838	Cryptococcus neoformans	47.71	1.00e-89	320.00
IUUC-Cme-027304	Cyanidioschyzon merolae	46.73	4.00e-80	288.00
IUUC-Dre-028567	Danio rerio	47.83	7.00e-90	321.00
IUUC-Dno-029171	Dasypus novemcinctus	47.66	6.00e-88	315.00
IUUC-Dor-030257	Dipodomys ordii	33.33	3.00e-26	110.00
IUUC-Dse-031191	Dothistroma septosporum	45.73	2.00e-80	290.00
IUUC-Dme-031879	Drosophila melanogaster	51.24	6.00e-101	358.00
IUUC-Ete-032336	Echinops telfairi	41.55	5.00e-47	178.00
IUUC-Eca-033259	Equus caballus	47.98	4.00e-89	318.00
IUUC-Eeu-035153	Erinaceus europaeus	44.83	5.00e-30	122.00
IUUC-Fca-036489	Felis catus	47.98	4.00e-89	318.00
IUUC-Fal-037485	Ficedula albicollis	47.98	1.00e-88	317.00
IUUC-Fox-037860	Fusarium oxysporum	46.30	1.00e-85	306.00
IUUC-Fso-038188	Fusarium solani	47.53	5.00e-84	301.00
IUUC-Gmo-039311	Gadus morhua	46.73	4.00e-87	312.00
IUUC-Ggr-040045	Gaeumannomyces graminis	47.22	4.00e-88	315.00
IUUC-Gga-040645	Gallus gallus	47.27	4.00e-87	311.00
IUUC-Gac-042086	Gasterosteus aculeatus	45.96	9.00e-86	307.00
IUUC-Gma-043246	Glycine max	62.77	2.00e-126	442.00
IUUC-Ggo-045578	Gorilla gorilla	48.14	6.00e-90	321.00
IUUC-Hsa-046734	Homo sapiens	48.14	6.00e-90	321.00
IUUC-Hvu-047553	Hordeum vulgare	60.86	5.00e-117	411.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	48.29	1.00e-89	320.00
IUUC-Kpa-049325	Komagataella pastoris	46.30	2.00e-84	303.00
IUUC-Lch-049620	Latimeria chalumnae	46.82	2.00e-81	292.00
IUUC-Lpe-051338	Leersia perrieri	59.62	1.00e-111	393.00
IUUC-Loc-052094	Lepisosteus oculatus	43.38	1.00e-74	270.00
IUUC-Lma-053047	Leptosphaeria maculans	47.69	3.00e-87	312.00
IUUC-Laf-053801	Loxodonta africana	47.62	3.00e-86	308.00
IUUC-Mcc-055498	Macaca mulatta	43.17	5.00e-71	258.00
IUUC-Meu-056729	Macropus eugenii	44.41	4.00e-81	291.00
IUUC-Mor-057025	Magnaporthe oryzae	47.84	6.00e-89	318.00
IUUC-Mpo-057511	Magnaporthe poae	47.84	9.00e-88	314.00
IUUC-Mtr-058051	Medicago truncatula	62.46	1.00e-124	436.00
IUUC-Mla-059061	Melampsora laricipopulina	42.55	2.00e-78	283.00
IUUC-Mga-059229	Meleagris gallopavo	47.68	3.00e-86	309.00
IUUC-Mvi-060399	Microbotryum violaceum	41.87	2.00e-78	283.00
IUUC-Mmr-060764	Microcebus murinus	48.14	4.00e-90	322.00
IUUC-Mdo-062088	Monodelphis domestica	47.66	1.00e-89	320.00
IUUC-Mmu-064304	Mus musculus	48.45	4.00e-90	322.00
IUUC-Mac-065520	Musa acuminata	60.00	3.00e-120	422.00
IUUC-Mpu-066340	Mustela putorius furo	47.98	4.00e-89	318.00
IUUC-Mlu-067111	Myotis lucifugus	47.98	4.00e-89	318.00
IUUC-Nfi-068478	Neosartorya fischeri	46.50	8.00e-88	314.00
IUUC-Ncr-068820	Neurospora crassa	46.91	1.00e-84	303.00
IUUC-Nle-069903	Nomascus leucogenys	47.98	2.00e-89	320.00
IUUC-Opr-070221	Ochotona princeps	46.27	1.00e-85	306.00
IUUC-Ont-071765	Oreochromis niloticus	46.58	7.00e-89	317.00
IUUC-Oan-073660	Ornithorhynchus anatinus	45.49	4.00e-74	268.00
IUUC-Ocu-074039	Oryctolagus cuniculus	47.98	3.00e-89	319.00
IUUC-Oba-075395	Oryza barthii	54.91	6.00e-100	354.00
IUUC-Obr-076334	Oryza brachyantha	56.31	7.00e-107	377.00
IUUC-Ogl-077751	Oryza glaberrima	60.43	1.00e-116	410.00
IUUC-Ogu-078207	Oryza glumaepatula	60.43	1.00e-116	410.00
IUUC-Oin-079878	Oryza indica	60.43	1.00e-116	410.00
IUUC-Olo-080677	Oryza longistaminata	52.11	3.00e-107	379.00
IUUC-Ome-081228	Oryza meridionalis	47.56	5.00e-58	214.00
IUUC-Oni-082411	Oryza nivara	54.60	3.00e-100	355.00
IUUC-Opu-083136	Oryza punctata	60.12	4.00e-116	408.00
IUUC-Oru-084916	Oryza rufipogon	57.91	3.00e-114	402.00
IUUC-Osa-085776	Oryza sativa	60.43	1.00e-116	410.00
IUUC-Ola-087053	Oryzias latipes	45.96	3.00e-87	312.00
IUUC-Oga-088154	Otolemur garnettii	47.98	1.00e-89	320.00
IUUC-Oar-089915	Ovis aries	48.29	2.00e-89	319.00
IUUC-Ptr-091124	Pan troglodytes	39.94	1.00e-61	227.00
IUUC-Pan-092035	Papio anubis	48.14	6.00e-90	321.00
IUUC-Psi-094096	Pelodiscus sinensis	46.48	2.00e-55	206.00
IUUC-Pno-094988	Phaeosphaeria nodorum	42.72	4.00e-75	272.00
IUUC-Ppa-095536	Physcomitrella patens	63.69	2.00e-124	436.00
IUUC-Pfo-096101	Poecilia formosa	45.65	1.00e-87	313.00
IUUC-Pab-097726	Pongo abelii	48.14	6.00e-90	321.00
IUUC-Pop-099617	Populus trichocarpa	60.92	2.00e-122	429.00
IUUC-Pca-101014	Procavia capensis	48.14	6.00e-90	321.00
IUUC-Ppe-101320	Prunus persica	62.46	2.00e-125	439.00
IUUC-Pva-102789	Pteropus vampyrus	45.03	1.00e-78	283.00
IUUC-Pgr-103479	Puccinia graminis	44.10	8.00e-80	288.00
IUUC-Ptt-103981	Puccinia triticina	43.79	7.00e-80	288.00
IUUC-Pte-104278	Pyrenophora teres	46.15	2.00e-83	300.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	46.15	2.00e-83	300.00
IUUC-Rno-105867	Rattus norvegicus	47.83	6.00e-77	278.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.57	3.00e-76	276.00
IUUC-Sha-107039	Sarcophilus harrisii	47.66	1.00e-89	320.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	43.83	7.00e-86	307.00
IUUC-Spo-108314	Schizosaccharomyces pombe	43.52	4.00e-84	302.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	46.30	1.00e-90	323.00
IUUC-Smo-108728	Selaginella moellendorffii	61.23	6.00e-120	421.00
IUUC-Sit-110801	Setaria italica	60.31	2.00e-117	412.00
IUUC-Sly-111326	Solanum lycopersicum	63.08	2.00e-124	436.00
IUUC-Stu-112458	Solanum tuberosum	62.46	2.00e-123	432.00
IUUC-Sbi-114063	Sorghum bicolor	58.72	9.00e-116	407.00
IUUC-Sre-115096	Sporisorium reilianum	42.64	2.00e-73	266.00
IUUC-Ssc-116080	Sus scrofa	48.14	1.00e-89	320.00
IUUC-Tgu-116988	Taeniopygia guttata	47.66	4.00e-88	315.00
IUUC-Tru-118766	Takifugu rubripes	46.27	4.00e-89	318.00
IUUC-Tni-120197	Tetraodon nigroviridis	46.58	4.00e-89	318.00
IUUC-Tca-121316	Theobroma cacao	62.46	3.00e-124	435.00
IUUC-Tre-122097	Trichoderma reesei	47.53	1.00e-86	310.00
IUUC-Tvi-122442	Trichoderma virens	46.91	4.00e-86	308.00
IUUC-Tae-125800	Triticum aestivum	60.86	6.00e-117	411.00
IUUC-Tur-126334	Triticum urartu	51.38	1.00e-91	327.00
IUUC-Tme-127038	Tuber melanosporum	46.60	2.00e-85	306.00
IUUC-Ttr-128659	Tursiops truncatus	45.65	4.00e-72	262.00
IUUC-Uma-129464	Ustilago maydis	42.94	3.00e-73	266.00
IUUC-Vda-129841	Verticillium dahliae	48.77	1.00e-89	320.00
IUUC-Vvi-131076	Vitis vinifera	61.23	9.00e-123	430.00
IUUC-Xtr-132395	Xenopus tropicalis	47.52	3.00e-90	322.00
IUUC-Xma-133383	Xiphophorus maculatus	45.65	2.00e-87	313.00
IUUC-Yli-134586	Yarrowia lipolytica	43.56	3.00e-73	266.00
IUUC-Zma-135904	Zea mays	59.69	1.00e-116	410.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence