iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017902

Ensembl Protein ID

Bra015322.1-P

UniProt Accession

M4DFP9; M4DFP9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015322	Bra015322.1	Bra015322.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-25	86.7	262	292
E3 activity/RING/U-box	9.60e-14	52.2	2	68
UBD/Beta-Prp	4.20e-45	155.2	227	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t+++W 
   Q: 262  GHSKKVTSIKFvGDtDLVLTASSDKTVRIWG 292
           8***********6669**************7 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e++ +Pvv++ sG  y+++ Ie ++++ gk cPvt++p t +d+v  +t + +  + +++ s
   Q: 2    NCAISGEVPVEPVVSKkSGLLYEKRLIETHISDFGK-CPVTGEPHTIDDIVAVKTGKIVKPKPLHTAS 68
           7***********************************.*************************999876 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgd 107
           ++++  +k+++atg+ d t  ++d  +g+ l++l gh+++vt++kf  d+++ +t+s+D+t+++w  s   ++ c htlk h+++v++++++++++
   Q: 227  SMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGSSedgSYACRHTLKDHSAEVRAVTVHATNK 322
           567778999********************************************************544477899********************** PP
   S: 108  klvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           ++vs+s d+t   +d+++g cl + t++ ++   + +++hpdg +l +G++ ++v++Wd+k++  + ++ g ht+ ++s+sf++ng +l++ +ldg
   Q: 323  YFVSASLDSTWCFYDMSSGLCLAQvTDDSEKVDYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGG-HTGEITSVSFSENGYFLATSALDG 417
           **********************998999999999***********************************88.*******************99998 PP
   S: 203  tvklwdlqtgecvrtlnghtdnvksvrfspnderl 237
            v+lwdl++ +  rt++  ++n  sv+f+  + +l
   Q: 418  -VRLWDLRKLKNFRTFEFPNAN--SVEFDHSGSYL 449
           .8******99999999876543..55555555555 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNCAISGEVP VEPVVSKKSG LLYEKRLIET HISDFGKCPV TGEPHTIDDI VAVKTGKIVK 60
PKPLHTASIP GLLGTFQTEW DGLMLSNFSL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGCG CAAGTAAGAC ATCTCTTTCT CATTCTTCTC GATTTACCAA TTTAGGGTTT 60
TACATCTGTT ACTGACACCG TGGTTTGTTT CTCTGCACAG TTTCCGGCGA AGTTCCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	64.62	0.00e+00	697.00
IUUC-Aml-001230	Ailuropoda melanoleuca	42.58	3.00e-105	375.00
IUUC-Apl-003686	Anas platyrhynchos	41.78	6.00e-81	294.00
IUUC-Aly-005586	Arabidopsis lyrata	92.34	0.00e+00	1010.00
IUUC-Ath-007693	Arabidopsis thaliana	91.40	0.00e+00	996.00
IUUC-Bgr-012283	Blumeria graminis	31.00	4.00e-48	185.00
IUUC-Bta-013242	Bos taurus	43.33	3.00e-111	395.00
IUUC-Bci-013901	Botrytis cinerea	34.87	2.00e-67	249.00
IUUC-Bdi-014896	Brachypodium distachyon	70.88	0.00e+00	777.00
IUUC-Bol-016045	Brassica oleracea	98.47	0.00e+00	1065.00
IUUC-Cfa-020175	Canis familiaris	43.13	5.00e-111	394.00
IUUC-Cpo-022379	Cavia porcellus	43.33	8.00e-111	393.00
IUUC-Csa-023500	Chlorocebus sabaeus	43.52	9.00e-112	396.00
IUUC-Cho-025065	Choloepus hoffmanni	36.16	3.00e-42	165.00
IUUC-Cne-026860	Cryptococcus neoformans	36.90	2.00e-92	332.00
IUUC-Dno-029453	Dasypus novemcinctus	43.52	1.00e-111	396.00
IUUC-Dse-031220	Dothistroma septosporum	32.71	2.00e-62	232.00
IUUC-Ete-033035	Echinops telfairi	44.30	6.00e-55	207.00
IUUC-Eca-033478	Equus caballus	43.33	6.00e-111	394.00
IUUC-Fca-036194	Felis catus	42.91	1.00e-109	389.00
IUUC-Fal-037417	Ficedula albicollis	43.93	9.00e-112	396.00
IUUC-Fox-037922	Fusarium oxysporum	30.92	2.00e-57	216.00
IUUC-Fso-038256	Fusarium solani	31.91	5.00e-61	228.00
IUUC-Ggr-039854	Gaeumannomyces graminis	33.33	1.00e-55	210.00
IUUC-Gga-041143	Gallus gallus	43.91	2.00e-112	398.00
IUUC-Ggo-045262	Gorilla gorilla	43.52	9.00e-112	396.00
IUUC-Hsa-046036	Homo sapiens	43.52	9.00e-112	396.00
IUUC-Hvu-047442	Hordeum vulgare	70.19	3.00e-130	457.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	43.52	3.00e-110	391.00
IUUC-Lpe-050976	Leersia perrieri	70.69	0.00e+00	758.00
IUUC-Laf-053451	Loxodonta africana	42.13	2.00e-108	385.00
IUUC-Mcc-055786	Macaca mulatta	43.52	9.00e-112	396.00
IUUC-Mpo-057419	Magnaporthe poae	32.89	7.00e-51	194.00
IUUC-Mla-059085	Melampsora laricipopulina	35.63	5.00e-79	288.00
IUUC-Mga-060158	Meleagris gallopavo	42.92	3.00e-98	351.00
IUUC-Mmr-061085	Microcebus murinus	43.52	9.00e-112	396.00
IUUC-Mdo-061804	Monodelphis domestica	43.52	1.00e-111	396.00
IUUC-Mmu-063608	Mus musculus	41.60	2.00e-107	382.00
IUUC-Mpu-065700	Mustela putorius furo	43.13	3.00e-111	395.00
IUUC-Mlu-068223	Myotis lucifugus	42.29	3.00e-108	385.00
IUUC-Nle-069754	Nomascus leucogenys	43.52	9.00e-112	396.00
IUUC-Opr-070621	Ochotona princeps	44.83	4.00e-104	371.00
IUUC-Oan-073498	Ornithorhynchus anatinus	31.83	4.00e-34	138.00
IUUC-Ocu-074182	Oryctolagus cuniculus	41.82	7.00e-108	384.00
IUUC-Oba-075509	Oryza barthii	70.53	0.00e+00	769.00
IUUC-Obr-076480	Oryza brachyantha	71.95	0.00e+00	770.00
IUUC-Ogl-077052	Oryza glaberrima	70.53	0.00e+00	769.00
IUUC-Ogu-078919	Oryza glumaepatula	70.72	0.00e+00	771.00
IUUC-Olo-080376	Oryza longistaminata	70.18	0.00e+00	717.00
IUUC-Ome-081973	Oryza meridionalis	70.18	0.00e+00	718.00
IUUC-Oni-082849	Oryza nivara	70.34	0.00e+00	766.00
IUUC-Opu-083243	Oryza punctata	70.91	0.00e+00	772.00
IUUC-Oru-084613	Oryza rufipogon	70.53	0.00e+00	769.00
IUUC-Osa-085407	Oryza sativa	70.34	0.00e+00	766.00
IUUC-Oar-089638	Ovis aries	43.33	3.00e-111	395.00
IUUC-Ptr-091141	Pan troglodytes	43.52	9.00e-112	396.00
IUUC-Pan-092662	Papio anubis	43.52	9.00e-112	396.00
IUUC-Psi-093777	Pelodiscus sinensis	43.81	2.00e-89	322.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.33	2.00e-61	229.00
IUUC-Ppa-095924	Physcomitrella patens	66.60	0.00e+00	719.00
IUUC-Pab-098250	Pongo abelii	43.79	6.00e-107	380.00
IUUC-Pca-100553	Procavia capensis	43.52	1.00e-109	389.00
IUUC-Ppe-101383	Prunus persica	70.63	0.00e+00	751.00
IUUC-Pva-102189	Pteropus vampyrus	43.33	3.00e-111	395.00
IUUC-Pgr-103304	Puccinia graminis	35.05	5.00e-77	281.00
IUUC-Ptt-103984	Puccinia triticina	35.23	6.00e-79	288.00
IUUC-Pte-104385	Pyrenophora teres	32.27	2.00e-60	226.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	32.08	4.00e-59	221.00
IUUC-Rno-105581	Rattus norvegicus	43.13	6.00e-111	394.00
IUUC-Sha-107071	Sarcophilus harrisii	41.74	2.00e-107	382.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.03	5.00e-45	175.00
IUUC-Spo-108315	Schizosaccharomyces pombe	30.52	5.00e-39	155.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	33.33	2.00e-63	236.00
IUUC-Smo-109648	Selaginella moellendorffii	65.05	0.00e+00	698.00
IUUC-Ssc-116260	Sus scrofa	43.33	3.00e-111	395.00
IUUC-Tgu-116533	Taeniopygia guttata	44.12	2.00e-112	399.00
IUUC-Tca-121807	Theobroma cacao	74.38	0.00e+00	825.00
IUUC-Tre-121920	Trichoderma reesei	32.22	1.00e-57	216.00
IUUC-Tvi-122294	Trichoderma virens	31.80	5.00e-50	191.00
IUUC-Tae-125713	Triticum aestivum	69.39	0.00e+00	768.00
IUUC-Tur-126664	Triticum urartu	60.14	0.00e+00	698.00
IUUC-Tme-127026	Tuber melanosporum	34.30	4.00e-68	251.00
IUUC-Ttr-128313	Tursiops truncatus	43.33	5.00e-110	390.00
IUUC-Vda-129699	Verticillium dahliae	31.73	3.00e-55	209.00
IUUC-Vpa-130593	Vicugna pacos	44.61	3.00e-103	368.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence