iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098972

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTR_0010s20520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s20520	POPTR_0010s20520.1	POPTR_0010s20520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-20	72.6	170	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
              + l++   + +llv+++dDg++++WD+++
   Q: 170  QVLRVLDYsrVSrHLLVTAGDDGSVHLWDITS 201
           5555666776333789*************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLLAASGGD TVKLFDVSVD PGDPCTLNYT PTPGCVVNSV KWNHTNLVVA SAGEDKKISL 60
WRKNGQNMGT IPVSGTDSRD SIEESLSAIS FSNKGSRYIC SGGSGQVVRI WDLQRKRCIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTTGC TGGCGGCGAG TGGTGGCGAC ACCGTGAAGC TTTTCGATGT ATCAGTGGAT 60
CCAGGAGATC CATGCACTTT GAATTACACA CCAACTCCGG GTTGCGTTGT TAACTCAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0010s20520g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	45.62	2.00e-96	347.00
IUUC-Bdi-014340	Brachypodium distachyon	55.56	0.00e+00	747.00
IUUC-Cja-019541	Callithrix jacchus	30.85	1.00e-40	160.00
IUUC-Csa-023620	Chlorocebus sabaeus	30.60	4.00e-41	162.00
IUUC-Eeu-034671	Erinaceus europaeus	33.77	1.00e-36	147.00
IUUC-Ggo-044576	Gorilla gorilla	30.60	1.00e-40	160.00
IUUC-Hsa-046198	Homo sapiens	30.60	1.00e-40	160.00
IUUC-Lpe-051469	Leersia perrieri	54.94	0.00e+00	765.00
IUUC-Mcc-054977	Macaca mulatta	30.75	5.00e-41	162.00
IUUC-Nle-069990	Nomascus leucogenys	30.87	1.00e-40	160.00
IUUC-Olu-087591	Ostreococcus lucimarinus	26.86	4.00e-20	92.00
IUUC-Ptr-091036	Pan troglodytes	30.60	1.00e-40	160.00
IUUC-Pan-092576	Papio anubis	30.75	5.00e-41	162.00
IUUC-Ppa-095636	Physcomitrella patens	47.14	0.00e+00	640.00
IUUC-Pab-097829	Pongo abelii	30.35	1.00e-40	160.00
IUUC-Pca-100217	Procavia capensis	30.06	4.00e-33	135.00
IUUC-Sit-109796	Setaria italica	54.70	0.00e+00	739.00
IUUC-Sar-112926	Sorex araneus	28.27	8.00e-30	124.00
IUUC-Tsy-118856	Tarsius syrichta	36.07	6.00e-37	148.00
IUUC-Tae-124830	Triticum aestivum	55.75	0.00e+00	741.00
IUUC-Tur-126840	Triticum urartu	53.74	0.00e+00	710.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence