iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116242

Ensembl Protein ID

ENSSSCP00000000953.2

UniProt Accession

F1SQR9; F1SQR9_PIG

Genbank Protein ID

ENSSSCP00000000953

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU896549

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000000890.2	ENSSSCT00000000974.2	ENSSSCP00000000953.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-22	78.4	81	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           tc+++ s+  +lvsG+ ++t+ +WDl++ ++
   Q: 81   TCVSLnSTsMYLVSGGLNNTVNIWDLKSKRV 111
           79999866699**************998765 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MQENLRFASS GDDVKIWDAS SMTLVDKFNP HTSPHGISSV CWSSNNNFLV TASSSGDKIV 60
VSSCKCKPVP LLELGEGQKQ TCVSLNSTSM YLVSGGLNNT VNIWDLKSKR VHRSLKDHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGGGCGGG ACTTCCGGCC GCCGAAGTTT AACACTCCAG GCGGGAGCCG GAAGCCCAGC 60
GCCGGAGCGG GCCGGTCCGA TGCCCCCGGT CTACGGCGGC TGAGAGGTGA GGTTCGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0071539--P:protein localization to centrosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	37.50	4.00e-17	83.60
IUUC-Aml-002397	Ailuropoda melanoleuca	90.08	0.00e+00	687.00
IUUC-Atr-002464	Amborella trichopoda	30.88	2.00e-38	153.00
IUUC-Apl-003870	Anas platyrhynchos	71.43	4.00e-156	544.00
IUUC-Aca-004925	Anolis carolinensis	66.58	2.00e-147	515.00
IUUC-Aly-005931	Arabidopsis lyrata	30.66	2.00e-38	154.00
IUUC-Ath-006681	Arabidopsis thaliana	30.58	5.00e-38	152.00
IUUC-Ame-010906	Astyanax mexicanus	64.90	5.00e-114	404.00
IUUC-Bta-013389	Bos taurus	92.76	0.00e+00	693.00
IUUC-Bdi-014340	Brachypodium distachyon	30.47	3.00e-37	149.00
IUUC-Bol-016282	Brassica oleracea	30.88	1.00e-37	150.00
IUUC-Bra-017178	Brassica rapa	31.67	1.00e-37	151.00
IUUC-Cja-019541	Callithrix jacchus	90.88	0.00e+00	704.00
IUUC-Cfa-021218	Canis familiaris	89.81	0.00e+00	684.00
IUUC-Cpo-021697	Cavia porcellus	85.52	0.00e+00	654.00
IUUC-Csa-023620	Chlorocebus sabaeus	91.42	0.00e+00	707.00
IUUC-Cho-025105	Choloepus hoffmanni	85.21	2.00e-130	459.00
IUUC-Cin-025293	Ciona intestinalis	40.80	5.00e-62	232.00
IUUC-Csv-026234	Ciona savignyi	35.50	1.00e-50	192.00
IUUC-Dre-028251	Danio rerio	64.21	3.00e-105	375.00
IUUC-Dno-029281	Dasypus novemcinctus	87.94	0.00e+00	677.00
IUUC-Dor-031020	Dipodomys ordii	93.38	5.00e-85	308.00
IUUC-Ete-033113	Echinops telfairi	86.14	3.00e-166	578.00
IUUC-Eca-034230	Equus caballus	90.64	0.00e+00	687.00
IUUC-Eeu-034671	Erinaceus europaeus	81.71	1.00e-147	516.00
IUUC-Fca-035775	Felis catus	91.42	0.00e+00	702.00
IUUC-Fal-037557	Ficedula albicollis	66.84	1.00e-134	473.00
IUUC-Gmo-038586	Gadus morhua	60.40	7.00e-102	363.00
IUUC-Gga-040153	Gallus gallus	69.27	2.00e-148	519.00
IUUC-Gac-041385	Gasterosteus aculeatus	60.00	2.00e-107	382.00
IUUC-Gma-042844	Glycine max	32.75	2.00e-42	167.00
IUUC-Ggo-044576	Gorilla gorilla	92.23	0.00e+00	713.00
IUUC-Hsa-046198	Homo sapiens	91.69	0.00e+00	710.00
IUUC-Hvu-047794	Hordeum vulgare	33.83	3.00e-18	84.00
IUUC-Lch-050561	Latimeria chalumnae	54.03	4.00e-103	368.00
IUUC-Lpe-051469	Leersia perrieri	28.19	5.00e-35	142.00
IUUC-Loc-052816	Lepisosteus oculatus	65.28	5.00e-115	408.00
IUUC-Laf-053880	Loxodonta africana	87.43	0.00e+00	644.00
IUUC-Mcc-054977	Macaca mulatta	91.15	0.00e+00	704.00
IUUC-Meu-056141	Macropus eugenii	64.97	6.00e-127	447.00
IUUC-Mtr-058441	Medicago truncatula	32.56	1.00e-40	161.00
IUUC-Mga-060141	Meleagris gallopavo	66.49	3.00e-139	488.00
IUUC-Mmr-061201	Microcebus murinus	90.57	0.00e+00	694.00
IUUC-Mdo-061855	Monodelphis domestica	78.82	6.00e-163	567.00
IUUC-Mmu-064342	Mus musculus	86.60	0.00e+00	671.00
IUUC-Mac-065368	Musa acuminata	30.64	3.00e-36	147.00
IUUC-Mpu-066191	Mustela putorius furo	89.54	0.00e+00	686.00
IUUC-Mlu-067310	Myotis lucifugus	89.81	0.00e+00	671.00
IUUC-Nle-069990	Nomascus leucogenys	91.96	0.00e+00	711.00
IUUC-Opr-070336	Ochotona princeps	79.62	2.00e-168	585.00
IUUC-Ont-071675	Oreochromis niloticus	60.07	2.00e-111	395.00
IUUC-Oan-072772	Ornithorhynchus anatinus	75.70	5.00e-123	434.00
IUUC-Ocu-074095	Oryctolagus cuniculus	90.08	0.00e+00	675.00
IUUC-Oba-075327	Oryza barthii	29.88	2.00e-36	147.00
IUUC-Obr-076119	Oryza brachyantha	30.18	4.00e-37	149.00
IUUC-Ogl-077820	Oryza glaberrima	29.59	5.00e-36	145.00
IUUC-Ogu-078679	Oryza glumaepatula	30.09	3.00e-36	147.00
IUUC-Oin-079891	Oryza indica	29.88	1.00e-36	148.00
IUUC-Olo-080414	Oryza longistaminata	32.27	2.00e-34	140.00
IUUC-Ome-081888	Oryza meridionalis	30.18	5.00e-37	149.00
IUUC-Oni-082417	Oryza nivara	29.88	1.00e-36	147.00
IUUC-Opu-083393	Oryza punctata	29.57	1.00e-37	151.00
IUUC-Oru-084698	Oryza rufipogon	29.88	2.00e-36	147.00
IUUC-Osa-086121	Oryza sativa	29.88	1.00e-36	147.00
IUUC-Ola-086806	Oryzias latipes	55.52	6.00e-104	371.00
IUUC-Olu-087591	Ostreococcus lucimarinus	24.26	1.00e-14	73.90
IUUC-Oga-088622	Otolemur garnettii	87.94	0.00e+00	665.00
IUUC-Oar-090391	Ovis aries	91.96	0.00e+00	684.00
IUUC-Ptr-091036	Pan troglodytes	91.69	0.00e+00	711.00
IUUC-Pan-092576	Papio anubis	91.42	0.00e+00	707.00
IUUC-Psi-093450	Pelodiscus sinensis	73.32	8.00e-155	540.00
IUUC-Pma-094101	Petromyzon marinus	56.11	4.00e-105	374.00
IUUC-Ppa-095636	Physcomitrella patens	33.22	5.00e-39	155.00
IUUC-Pfo-097142	Poecilia formosa	59.33	1.00e-107	383.00
IUUC-Pab-097829	Pongo abelii	91.15	0.00e+00	702.00
IUUC-Pop-099687	Populus trichocarpa	32.47	2.00e-40	160.00
IUUC-Pca-100217	Procavia capensis	82.84	6.00e-179	620.00
IUUC-Ppe-101502	Prunus persica	32.69	1.00e-39	158.00
IUUC-Pva-102736	Pteropus vampyrus	91.42	0.00e+00	677.00
IUUC-Rno-104977	Rattus norvegicus	86.06	0.00e+00	651.00
IUUC-Sha-107003	Sarcophilus harrisii	78.55	2.00e-161	562.00
IUUC-Smo-109216	Selaginella moellendorffii	35.10	2.00e-40	159.00
IUUC-Sit-109796	Setaria italica	28.97	1.00e-36	148.00
IUUC-Sly-110941	Solanum lycopersicum	31.44	3.00e-36	146.00
IUUC-Stu-112314	Solanum tuberosum	32.11	7.00e-37	148.00
IUUC-Sar-112926	Sorex araneus	78.82	2.00e-169	588.00
IUUC-Sbi-113822	Sorghum bicolor	32.93	4.00e-25	109.00
IUUC-Tgu-116765	Taeniopygia guttata	68.18	9.00e-140	490.00
IUUC-Tru-117738	Takifugu rubripes	58.67	4.00e-107	382.00
IUUC-Tsy-118856	Tarsius syrichta	85.63	6.00e-164	570.00
IUUC-Tni-120871	Tetraodon nigroviridis	58.67	3.00e-109	389.00
IUUC-Tca-120965	Theobroma cacao	31.23	1.00e-38	154.00
IUUC-Tae-123957	Triticum aestivum	28.69	5.00e-38	152.00
IUUC-Tur-126840	Triticum urartu	28.69	4.00e-38	152.00
IUUC-Ttr-128551	Tursiops truncatus	88.74	0.00e+00	655.00
IUUC-Vpa-130324	Vicugna pacos	93.82	0.00e+00	688.00
IUUC-Vvi-131699	Vitis vinifera	33.01	2.00e-40	160.00
IUUC-Xtr-131956	Xenopus tropicalis	68.63	3.00e-151	528.00
IUUC-Xma-132982	Xiphophorus maculatus	59.00	9.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence