iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-068979

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01034066

Gene Name

VPS18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000003368.2	ENSNLET00000004315.2	ENSNLEP00000004112.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	99.53	0.00e+00	1725.00	IUUC-Hsa-046635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MASILDEYEN SLSRSAVLQP GCPSVGIPHS GYVNAQLEKE VPIFTKQRID FTPSERITSL 60
VVSSNQLCMS LGKDTLLRID LGKANEPNHV ELGRKDDAKV HKMFLDHTGS HLLIALSSTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCGGGCC CGGAGACGTT GTGCGCCAGC GTACGTGCGC CTCTGAGAAC CCGGAAGTTA 60
CGTTTTAGGC CCGCGTCACG GGGGCGGGAG TCAGCTGAGC TGCCGGGGCG ACGTTGGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin
PF05131--Pep3_Vps18

Gene Ontology

GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0005765--C:lysosomal membrane
GO:0007032--P:endosome organization
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:0007040--P:lysosome organization
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	32.53	4.00e-90	326.00
IUUC-Aml-001240	Ailuropoda melanoleuca	97.21	0.00e+00	1681.00
IUUC-Atr-003125	Amborella trichopoda	32.84	3.00e-102	366.00
IUUC-Apl-004181	Anas platyrhynchos	72.64	0.00e+00	1308.00
IUUC-Aca-004437	Anolis carolinensis	72.64	0.00e+00	1293.00
IUUC-Aly-006046	Arabidopsis lyrata	33.99	3.00e-117	416.00
IUUC-Ath-006932	Arabidopsis thaliana	33.77	1.00e-116	414.00
IUUC-Ago-007800	Ashbya gossypii	23.29	9.00e-43	168.00
IUUC-Acl-008035	Aspergillus clavatus	30.85	1.00e-92	334.00
IUUC-Afl-008714	Aspergillus flavus	31.01	1.00e-93	337.00
IUUC-Afu-009063	Aspergillus fumigatus	31.94	2.00e-94	340.00
IUUC-Ani-009384	Aspergillus nidulans	32.23	3.00e-97	350.00
IUUC-Ang-009507	Aspergillus niger	31.75	2.00e-93	337.00
IUUC-Aor-010094	Aspergillus oryzae	31.01	2.00e-93	337.00
IUUC-Ate-010421	Aspergillus terreus	31.06	4.00e-86	312.00
IUUC-Ame-011797	Astyanax mexicanus	66.16	0.00e+00	1169.00
IUUC-Bgr-012107	Blumeria graminis	31.33	3.00e-97	349.00
IUUC-Bta-012339	Bos taurus	96.74	0.00e+00	1679.00
IUUC-Bci-013895	Botrytis cinerea	33.33	2.00e-99	357.00
IUUC-Bdi-014554	Brachypodium distachyon	34.60	1.00e-107	384.00
IUUC-Bol-015270	Brassica oleracea	34.29	5.00e-118	418.00
IUUC-Bra-017424	Brassica rapa	33.10	3.00e-112	399.00
IUUC-Cel-018455	Caenorhabditis elegans	26.21	1.00e-76	281.00
IUUC-Cja-019629	Callithrix jacchus	98.02	0.00e+00	1706.00
IUUC-Cfa-020425	Canis familiaris	97.21	0.00e+00	1682.00
IUUC-Cpo-021349	Cavia porcellus	95.47	0.00e+00	1655.00
IUUC-Cre-022799	Chlamydomonas reinhardtii	31.65	3.00e-24	107.00
IUUC-Csa-023559	Chlorocebus sabaeus	99.19	0.00e+00	1716.00
IUUC-Cho-024862	Choloepus hoffmanni	88.73	0.00e+00	1384.00
IUUC-Cin-025599	Ciona intestinalis	41.64	6.00e-153	535.00
IUUC-Csv-026152	Ciona savignyi	43.01	0.00e+00	694.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	30.39	6.00e-93	335.00
IUUC-Cne-026907	Cryptococcus neoformans	30.50	2.00e-101	363.00
IUUC-Dre-027747	Danio rerio	66.59	0.00e+00	1216.00
IUUC-Dno-029668	Dasypus novemcinctus	96.86	0.00e+00	1675.00
IUUC-Dor-030404	Dipodomys ordii	89.87	0.00e+00	1543.00
IUUC-Dse-031345	Dothistroma septosporum	32.80	8.00e-101	361.00
IUUC-Dme-031711	Drosophila melanogaster	33.99	9.00e-126	444.00
IUUC-Ete-032308	Echinops telfairi	89.58	0.00e+00	709.00
IUUC-Eca-033637	Equus caballus	97.32	0.00e+00	1682.00
IUUC-Eeu-035151	Erinaceus europaeus	95.86	0.00e+00	1203.00
IUUC-Fca-035585	Felis catus	96.97	0.00e+00	1678.00
IUUC-Fal-037122	Ficedula albicollis	74.51	0.00e+00	1347.00
IUUC-Fox-038030	Fusarium oxysporum	32.85	1.00e-102	367.00
IUUC-Fso-038426	Fusarium solani	32.92	8.00e-107	381.00
IUUC-Gmo-038784	Gadus morhua	66.98	0.00e+00	1157.00
IUUC-Ggr-039973	Gaeumannomyces graminis	33.72	2.00e-102	367.00
IUUC-Gga-040692	Gallus gallus	74.04	0.00e+00	1330.00
IUUC-Gac-041868	Gasterosteus aculeatus	66.16	0.00e+00	1159.00
IUUC-Gma-044274	Glycine max	34.00	1.00e-117	417.00
IUUC-Ggo-045053	Gorilla gorilla	99.30	0.00e+00	1719.00
IUUC-Hsa-046635	Homo sapiens	99.53	0.00e+00	1722.00
IUUC-Hvu-047361	Hordeum vulgare	34.29	2.00e-106	380.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	96.86	0.00e+00	1679.00
IUUC-Kpa-049270	Komagataella pastoris	23.95	5.00e-63	236.00
IUUC-Lch-050188	Latimeria chalumnae	69.80	0.00e+00	1111.00
IUUC-Lpe-051026	Leersia perrieri	35.49	1.00e-113	404.00
IUUC-Loc-051821	Lepisosteus oculatus	67.13	0.00e+00	1194.00
IUUC-Lma-053178	Leptosphaeria maculans	36.43	8.00e-81	294.00
IUUC-Laf-053552	Loxodonta africana	96.86	0.00e+00	1677.00
IUUC-Mcc-054667	Macaca mulatta	99.19	0.00e+00	1716.00
IUUC-Meu-056422	Macropus eugenii	90.74	0.00e+00	673.00
IUUC-Mor-056981	Magnaporthe oryzae	32.55	4.00e-100	359.00
IUUC-Mtr-058703	Medicago truncatula	33.88	3.00e-111	396.00
IUUC-Mla-059088	Melampsora laricipopulina	35.13	3.00e-80	293.00
IUUC-Mga-059798	Meleagris gallopavo	73.69	0.00e+00	1326.00
IUUC-Mvi-060404	Microbotryum violaceum	32.95	4.00e-107	383.00
IUUC-Mmr-061630	Microcebus murinus	98.14	0.00e+00	1698.00
IUUC-Mdo-062354	Monodelphis domestica	91.71	0.00e+00	1622.00
IUUC-Mmu-063199	Mus musculus	95.69	0.00e+00	1663.00
IUUC-Mac-065595	Musa acuminata	36.97	4.00e-96	345.00
IUUC-Mpu-066596	Mustela putorius furo	96.74	0.00e+00	1678.00
IUUC-Mlu-067455	Myotis lucifugus	96.62	0.00e+00	1667.00
IUUC-Nfi-068565	Neosartorya fischeri	32.20	7.00e-97	348.00
IUUC-Ncr-068748	Neurospora crassa	33.44	5.00e-108	385.00
IUUC-Opr-070711	Ochotona princeps	95.58	0.00e+00	1654.00
IUUC-Ont-072603	Oreochromis niloticus	65.93	0.00e+00	1170.00
IUUC-Oan-073136	Ornithorhynchus anatinus	84.93	0.00e+00	820.00
IUUC-Ocu-074496	Oryctolagus cuniculus	96.74	0.00e+00	1679.00
IUUC-Oba-075933	Oryza barthii	33.83	4.00e-100	359.00
IUUC-Obr-076290	Oryza brachyantha	34.55	2.00e-113	403.00
IUUC-Ogu-078728	Oryza glumaepatula	33.83	3.00e-100	360.00
IUUC-Oin-079954	Oryza indica	34.20	2.00e-112	400.00
IUUC-Olo-081033	Oryza longistaminata	32.47	1.00e-94	340.00
IUUC-Ome-081797	Oryza meridionalis	33.71	4.00e-107	382.00
IUUC-Oni-082802	Oryza nivara	33.83	3.00e-100	360.00
IUUC-Opu-083595	Oryza punctata	35.66	1.00e-113	404.00
IUUC-Oru-084199	Oryza rufipogon	33.83	3.00e-100	360.00
IUUC-Osa-085349	Oryza sativa	34.20	2.00e-112	400.00
IUUC-Ola-087482	Oryzias latipes	66.63	0.00e+00	1174.00
IUUC-Olu-087797	Ostreococcus lucimarinus	24.58	6.00e-53	202.00
IUUC-Oga-088817	Otolemur garnettii	97.79	0.00e+00	1696.00
IUUC-Oar-090350	Ovis aries	94.10	0.00e+00	1439.00
IUUC-Ptr-090999	Pan troglodytes	99.19	0.00e+00	1718.00
IUUC-Pan-092704	Papio anubis	99.19	0.00e+00	1716.00
IUUC-Psi-093529	Pelodiscus sinensis	73.92	0.00e+00	1301.00
IUUC-Pma-094400	Petromyzon marinus	57.04	0.00e+00	974.00
IUUC-Pno-094875	Phaeosphaeria nodorum	32.68	8.00e-101	361.00
IUUC-Ppa-095231	Physcomitrella patens	33.77	2.00e-116	413.00
IUUC-Pfo-096967	Poecilia formosa	65.70	0.00e+00	1164.00
IUUC-Pab-098300	Pongo abelii	99.42	0.00e+00	1721.00
IUUC-Pop-098966	Populus trichocarpa	34.80	4.00e-123	435.00
IUUC-Pca-100643	Procavia capensis	92.08	0.00e+00	1651.00
IUUC-Ppe-101589	Prunus persica	34.21	6.00e-117	415.00
IUUC-Pva-102766	Pteropus vampyrus	96.39	0.00e+00	1636.00
IUUC-Pgr-103330	Puccinia graminis	29.42	3.00e-93	337.00
IUUC-Ptt-103809	Puccinia triticina	31.01	7.00e-82	298.00
IUUC-Pte-104319	Pyrenophora teres	32.96	2.00e-104	373.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	32.91	2.00e-102	366.00
IUUC-Rno-105817	Rattus norvegicus	95.34	0.00e+00	1660.00
IUUC-Sce-106255	Saccharomyces cerevisiae	23.58	4.00e-36	146.00
IUUC-Sha-107479	Sarcophilus harrisii	87.72	0.00e+00	1613.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	24.18	8.00e-63	235.00
IUUC-Spo-108146	Schizosaccharomyces pombe	26.05	2.00e-65	243.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	33.42	4.00e-98	352.00
IUUC-Smo-109585	Selaginella moellendorffii	35.13	9.00e-114	404.00
IUUC-Sit-110275	Setaria italica	35.32	8.00e-112	398.00
IUUC-Sly-111073	Solanum lycopersicum	34.83	2.00e-117	417.00
IUUC-Stu-112392	Solanum tuberosum	27.62	5.00e-14	70.90
IUUC-Sar-113718	Sorex araneus	92.33	0.00e+00	1585.00
IUUC-Sbi-114080	Sorghum bicolor	35.32	2.00e-116	413.00
IUUC-Sre-115160	Sporisorium reilianum	31.25	3.00e-112	400.00
IUUC-Ssc-115997	Sus scrofa	96.51	0.00e+00	1673.00
IUUC-Tgu-116904	Taeniopygia guttata	73.64	0.00e+00	1171.00
IUUC-Tru-117946	Takifugu rubripes	64.89	0.00e+00	1158.00
IUUC-Tni-119692	Tetraodon nigroviridis	65.12	0.00e+00	1154.00
IUUC-Tca-121455	Theobroma cacao	34.21	6.00e-120	425.00
IUUC-Tre-122128	Trichoderma reesei	31.91	1.00e-108	387.00
IUUC-Tvi-122657	Trichoderma virens	32.77	1.00e-110	394.00
IUUC-Tae-125953	Triticum aestivum	34.48	3.00e-107	383.00
IUUC-Tur-126110	Triticum urartu	31.22	2.00e-76	281.00
IUUC-Tme-127173	Tuber melanosporum	31.81	4.00e-99	355.00
IUUC-Ttr-128420	Tursiops truncatus	96.39	0.00e+00	1667.00
IUUC-Uma-129580	Ustilago maydis	30.94	3.00e-111	397.00
IUUC-Vda-129790	Verticillium dahliae	30.70	7.00e-93	335.00
IUUC-Vvi-131095	Vitis vinifera	33.25	6.00e-116	412.00
IUUC-Xtr-131906	Xenopus tropicalis	69.24	0.00e+00	1204.00
IUUC-Xma-134197	Xiphophorus maculatus	66.16	0.00e+00	1169.00
IUUC-Yli-134617	Yarrowia lipolytica	28.86	5.00e-87	315.00
IUUC-Zma-134979	Zea mays	32.25	1.00e-83	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence