iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023055

Ensembl Protein ID

ENSCSAP00000006478.1

UniProt Accession

A0A0D9RCY9; A0A0D9RCY9_CHLSB

Genbank Protein ID

ENSCSAP00000006478

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01117899

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000010244.1	ENSCSAT00000008327.1	ENSCSAP00000006478.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-14	50.9	166	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + +++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAKEVQT 205
           8**********98559******************998875 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MERAVPLAVP LGQTEVFQAL QRLHMTIFSQ TVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKNPVM TFQAHDGPVY SMVSTDRHLL SAGDGEVKAW LWAEMLKKGC KELWHRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAG CTGTGCCGCT CGCTGTACCG CTGGGTCAGG TGAGACGGAC GTGGTGTGCG 60
CGTTGCCTTC TGGGATTTGT AGTCCATTCA TGGCTGGGAC GGGGCGGGCA GGGAATTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	30.65	9.00e-31	127.00
IUUC-Aml-001693	Ailuropoda melanoleuca	96.19	1.00e-180	625.00
IUUC-Atr-002699	Amborella trichopoda	29.20	1.00e-23	103.00
IUUC-Aca-004231	Anolis carolinensis	69.42	5.00e-126	444.00
IUUC-Aly-006385	Arabidopsis lyrata	30.88	3.00e-28	119.00
IUUC-Ath-006723	Arabidopsis thaliana	30.77	2.00e-28	119.00
IUUC-Ame-010813	Astyanax mexicanus	64.65	8.00e-89	319.00
IUUC-Bta-013458	Bos taurus	95.31	2.00e-178	617.00
IUUC-Bdi-014935	Brachypodium distachyon	30.24	1.00e-30	127.00
IUUC-Bol-015442	Brassica oleracea	30.47	1.00e-28	120.00
IUUC-Bra-017807	Brassica rapa	30.72	7.00e-29	121.00
IUUC-Cja-019061	Callithrix jacchus	97.37	0.00e+00	631.00
IUUC-Cfa-021146	Canis familiaris	96.19	0.00e+00	626.00
IUUC-Cpo-022512	Cavia porcellus	95.01	9.00e-180	622.00
IUUC-Cho-024693	Choloepus hoffmanni	94.33	2.00e-98	350.00
IUUC-Cin-025181	Ciona intestinalis	36.02	3.00e-57	215.00
IUUC-Csv-025852	Ciona savignyi	35.33	4.00e-49	187.00
IUUC-Dre-028221	Danio rerio	59.94	2.00e-118	418.00
IUUC-Dno-029200	Dasypus novemcinctus	89.95	8.00e-88	315.00
IUUC-Dor-030863	Dipodomys ordii	94.43	3.00e-178	617.00
IUUC-Dme-032016	Drosophila melanogaster	29.60	2.00e-37	149.00
IUUC-Eca-034363	Equus caballus	95.89	0.00e+00	627.00
IUUC-Fca-036546	Felis catus	96.19	0.00e+00	626.00
IUUC-Gmo-038513	Gadus morhua	56.93	2.00e-108	385.00
IUUC-Gac-042606	Gasterosteus aculeatus	56.83	1.00e-111	395.00
IUUC-Gma-043171	Glycine max	28.52	3.00e-32	132.00
IUUC-Ggo-044877	Gorilla gorilla	98.83	0.00e+00	642.00
IUUC-Hsa-045813	Homo sapiens	98.24	0.00e+00	642.00
IUUC-Hvu-047782	Hordeum vulgare	31.08	1.00e-20	92.40
IUUC-Itr-047876	Ictidomys tridecemlineatus	95.89	0.00e+00	627.00
IUUC-Lch-049506	Latimeria chalumnae	63.83	6.00e-119	420.00
IUUC-Lpe-051203	Leersia perrieri	30.51	9.00e-25	107.00
IUUC-Loc-052451	Lepisosteus oculatus	52.48	2.00e-89	322.00
IUUC-Laf-053864	Loxodonta africana	94.13	5.00e-177	613.00
IUUC-Mcc-055705	Macaca mulatta	90.42	2.00e-157	548.00
IUUC-Meu-055926	Macropus eugenii	90.52	5.00e-157	546.00
IUUC-Mtr-058556	Medicago truncatula	29.43	2.00e-32	133.00
IUUC-Mmr-060836	Microcebus murinus	96.77	0.00e+00	634.00
IUUC-Mdo-062534	Monodelphis domestica	90.52	5.00e-156	543.00
IUUC-Mmu-063560	Mus musculus	94.72	8.00e-178	615.00
IUUC-Mac-065134	Musa acuminata	28.34	1.00e-26	114.00
IUUC-Mpu-066031	Mustela putorius furo	96.77	0.00e+00	631.00
IUUC-Mlu-068051	Myotis lucifugus	92.38	3.00e-171	594.00
IUUC-Nle-069080	Nomascus leucogenys	97.65	0.00e+00	636.00
IUUC-Opr-070787	Ochotona princeps	90.62	1.00e-167	582.00
IUUC-Ont-071952	Oreochromis niloticus	55.59	4.00e-110	391.00
IUUC-Oan-073334	Ornithorhynchus anatinus	85.77	8.00e-119	419.00
IUUC-Oba-075175	Oryza barthii	31.07	1.00e-25	110.00
IUUC-Obr-076393	Oryza brachyantha	31.64	1.00e-25	110.00
IUUC-Ogl-077603	Oryza glaberrima	35.59	7.00e-19	87.40
IUUC-Ogu-078211	Oryza glumaepatula	31.07	1.00e-25	110.00
IUUC-Oin-079554	Oryza indica	31.07	7.00e-26	110.00
IUUC-Olo-080922	Oryza longistaminata	32.48	3.00e-23	102.00
IUUC-Ome-081127	Oryza meridionalis	24.29	2.00e-12	67.40
IUUC-Oni-082376	Oryza nivara	31.07	1.00e-25	110.00
IUUC-Opu-083163	Oryza punctata	30.51	3.00e-25	108.00
IUUC-Oru-084311	Oryza rufipogon	31.07	2.00e-25	110.00
IUUC-Osa-085762	Oryza sativa	35.59	9.00e-19	87.00
IUUC-Oga-088804	Otolemur garnettii	95.60	2.00e-180	624.00
IUUC-Oar-090095	Ovis aries	94.72	1.00e-177	615.00
IUUC-Ptr-090731	Pan troglodytes	98.53	0.00e+00	642.00
IUUC-Pan-092595	Papio anubis	98.83	0.00e+00	641.00
IUUC-Psi-093866	Pelodiscus sinensis	69.87	3.00e-117	414.00
IUUC-Pma-094236	Petromyzon marinus	59.57	3.00e-116	411.00
IUUC-Pfo-096095	Poecilia formosa	56.21	5.00e-106	377.00
IUUC-Pab-098385	Pongo abelii	98.24	0.00e+00	640.00
IUUC-Pop-099433	Populus trichocarpa	27.63	4.00e-29	122.00
IUUC-Pca-101119	Procavia capensis	95.89	2.00e-117	414.00
IUUC-Ppe-101677	Prunus persica	27.94	9.00e-27	114.00
IUUC-Pva-102726	Pteropus vampyrus	95.31	8.00e-180	622.00
IUUC-Rno-105576	Rattus norvegicus	95.31	7.00e-179	619.00
IUUC-Sha-106774	Sarcophilus harrisii	91.13	6.00e-158	550.00
IUUC-Sit-109988	Setaria italica	28.47	9.00e-29	120.00
IUUC-Sly-110864	Solanum lycopersicum	30.95	2.00e-29	123.00
IUUC-Sar-113060	Sorex araneus	86.69	1.00e-127	448.00
IUUC-Sbi-114699	Sorghum bicolor	29.81	2.00e-29	123.00
IUUC-Ssc-116445	Sus scrofa	95.89	0.00e+00	628.00
IUUC-Tru-117834	Takifugu rubripes	56.97	9.00e-115	406.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.45	1.00e-113	402.00
IUUC-Tca-121318	Theobroma cacao	28.34	1.00e-28	120.00
IUUC-Tae-124184	Triticum aestivum	30.65	1.00e-30	127.00
IUUC-Tur-126226	Triticum urartu	31.07	1.00e-26	113.00
IUUC-Tbe-128079	Tupaia belangeri	81.27	1.00e-106	379.00
IUUC-Ttr-128391	Tursiops truncatus	91.52	9.00e-169	585.00
IUUC-Vvi-131148	Vitis vinifera	27.13	2.00e-25	109.00
IUUC-Xtr-132743	Xenopus tropicalis	62.02	5.00e-117	413.00
IUUC-Xma-133722	Xiphophorus maculatus	56.52	7.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence