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Tag Content
iUUCD ID IUUC-Lch-050524
Ensembl Protein ID ENSLACP00000014011.1
UniProt Accession H3AWJ0; H3AWJ0_LATCH
Genbank Protein ID ENSLACP00000014011
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01093523
Gene Name RBBP6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000012333.1 ENSLACT00000014109.1 ENSLACP00000014010.1
ENSLACG00000012333.1 ENSLACT00000014110.1 ENSLACP00000014011.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 4.40e-10 39.7 254 327
ULD/UDP/UFD/DWNN 1.30e-42 144.1 4 76
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwl.asggktcPvtrqpl.teedlvPnltlrrliqawceen 72
           +p+e+lC I +++M+d vv+p +G +y  ++I+  l +s ++tcP+++q+  +++ l+ n++lr+ ++++ +e 
   Q: 254  IPDELLCLICKDIMNDAVVIPcCGNSYCDECIRTALlESEEHTCPTCHQTDvSPDALIANKFLRQAVNNFKNET 327
           8********************************999556666*****9986599999*********99998765 PP
   

   ULD/UDP/UFD/DWNN
   S: 1    vhykfksklnydtitfDGlhisvfDLkreiiqrekLgkaaDfdLqitnaqtkeeykDDafliPkntsvivkriP 74
           vhykf+sklnydt+tfDGlhis++DLk++i++rekL kaaD+dLqitnaqtkeey+DD++liPkn+svi++riP
   Q: 4    VHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKL-KAADCDLQITNAQTKEEYTDDNALIPKNSSVIIRRIP 76
           8***********************************.************************************9 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MSCVHYKFSS KLNYDTVTFD GLHISLCDLK KQIMGREKLK AADCDLQITN AQTKEEYTDD 60
NALIPKNSSV IIRRIPIGGV KTASKTFIVS SRTEPVSGTS KAIEDSSASI SLAQLTKTAN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050524|E3,U-box;ULD,DWNN|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTACGAAGG GAAGGGGGGG TGGTTTGTCC TTGCTAGCCA GGCCCGGAAA CCCCTGAGGA 60
GTGGCAGGCA GAGACGCCAT AGTTACTGCT TAGCGTTTGA GTGAGGCTGG AAACCGTCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050524|E3,U-box;ULD,DWNN|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR014891--DWNN_domain
IPR033489--RBBP6
IPR003613--Ubox_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51282--DWNN
PS51698--U_BOX
PS50158--ZF_CCHC
PS50089--ZF_RING_2
Pfam

PF08783--DWNN
PF04564--U-box
PF13696--zf-CCHC_2
SMART

SM01180--DWNN
SM00184--RING
SM00343--ZnF_C2HC
Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006397--P:mRNA processing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000195 Aegilops tauschii 30.59 4.00e-27 116.00
IUUC-Aml-001655 Ailuropoda melanoleuca 68.75 0.00e+00 647.00
IUUC-Atr-002768 Amborella trichopoda 38.69 7.00e-18 85.50
IUUC-Apl-004100 Anas platyrhynchos 52.79 0.00e+00 629.00
IUUC-Aca-004345 Anolis carolinensis 62.08 3.00e-98 353.00
IUUC-Aly-006444 Arabidopsis lyrata 32.35 1.00e-41 165.00
IUUC-Ath-006684 Arabidopsis thaliana 30.83 3.00e-35 143.00
IUUC-Ago-007949 Ashbya gossypii 27.17 2.00e-33 135.00
IUUC-Acl-008118 Aspergillus clavatus 31.79 3.00e-26 113.00
IUUC-Afl-008408 Aspergillus flavus 31.45 2.00e-15 77.00
IUUC-Afu-008777 Aspergillus fumigatus 30.77 3.00e-35 143.00
IUUC-Ani-009426 Aspergillus nidulans 30.65 2.00e-36 147.00
IUUC-Ang-009735 Aspergillus niger 29.97 1.00e-32 134.00
IUUC-Aor-010213 Aspergillus oryzae 31.05 4.00e-34 139.00
IUUC-Ate-010474 Aspergillus terreus 30.10 2.00e-33 136.00
IUUC-Ame-010679 Astyanax mexicanus 84.78 2.00e-165 577.00
IUUC-Bgr-012229 Blumeria graminis 33.13 1.00e-37 150.00
IUUC-Bta-012672 Bos taurus 67.20 0.00e+00 644.00
IUUC-Bci-013880 Botrytis cinerea 30.43 7.00e-34 138.00
IUUC-Bdi-014276 Brachypodium distachyon 30.93 8.00e-30 125.00
IUUC-Bol-015602 Brassica oleracea 33.24 9.00e-40 158.00
IUUC-Bra-016670 Brassica rapa 33.33 5.00e-40 159.00
IUUC-Cel-018532 Caenorhabditis elegans 36.76 1.00e-52 202.00
IUUC-Cja-018843 Callithrix jacchus 53.76 1.00e-169 590.00
IUUC-Cfa-021107 Canis familiaris 68.34 0.00e+00 654.00
IUUC-Cre-022712 Chlamydomonas reinhardtii 38.67 2.00e-10 60.10
IUUC-Csa-023397 Chlorocebus sabaeus 67.26 0.00e+00 648.00
IUUC-Cho-024327 Choloepus hoffmanni 66.67 4.00e-179 622.00
IUUC-Cin-025439 Ciona intestinalis 47.37 4.00e-47 180.00
IUUC-Csv-026162 Ciona savignyi 54.07 1.00e-54 205.00
IUUC-Cgl-026629 Colletotrichum gloeosporioides 31.67 3.00e-29 123.00
IUUC-Cne-026921 Cryptococcus neoformans 29.23 7.00e-39 155.00
IUUC-Cme-027244 Cyanidioschyzon merolae 50.00 6.00e-18 86.30
IUUC-Dre-028023 Danio rerio 81.85 1.00e-159 558.00
IUUC-Dno-029430 Dasypus novemcinctus 63.48 0.00e+00 631.00
IUUC-Dor-030406 Dipodomys ordii 50.49 2.00e-153 537.00
IUUC-Dse-031312 Dothistroma septosporum 31.72 7.00e-37 148.00
IUUC-Dme-032133 Drosophila melanogaster 43.02 1.00e-74 275.00
IUUC-Ete-032466 Echinops telfairi 50.28 2.00e-153 537.00
IUUC-Eca-033447 Equus caballus 93.73 1.00e-160 558.00
IUUC-Eeu-034677 Erinaceus europaeus 64.21 3.00e-148 520.00
IUUC-Fca-035439 Felis catus 66.01 3.00e-180 626.00
IUUC-Fal-037230 Ficedula albicollis 69.20 0.00e+00 645.00
IUUC-Fox-037976 Fusarium oxysporum 30.50 1.00e-34 141.00
IUUC-Fso-038202 Fusarium solani 27.78 2.00e-35 143.00
IUUC-Gmo-038618 Gadus morhua 66.51 4.00e-76 277.00
IUUC-Ggr-040035 Gaeumannomyces graminis 27.36 4.00e-32 132.00
IUUC-Gga-040908 Gallus gallus 70.43 0.00e+00 662.00
IUUC-Gac-041718 Gasterosteus aculeatus 71.49 7.00e-87 312.00
IUUC-Gma-044229 Glycine max 32.97 2.00e-41 164.00
IUUC-Ggo-044567 Gorilla gorilla 67.44 0.00e+00 657.00
IUUC-Hsa-046849 Homo sapiens 67.26 0.00e+00 647.00
IUUC-Hvu-047515 Hordeum vulgare 30.43 2.00e-23 102.00
IUUC-Itr-048832 Ictidomys tridecemlineatus 67.80 0.00e+00 645.00
IUUC-Kpa-049323 Komagataella pastoris 30.82 4.00e-34 138.00
IUUC-Lpe-050947 Leersia perrieri 29.84 1.00e-30 128.00
IUUC-Loc-052709 Lepisosteus oculatus 87.80 3.00e-167 583.00
IUUC-Lma-053186 Leptosphaeria maculans 32.43 2.00e-32 133.00
IUUC-Laf-054472 Loxodonta africana 67.44 0.00e+00 644.00
IUUC-Mcc-055743 Macaca mulatta 67.26 0.00e+00 647.00
IUUC-Meu-056399 Macropus eugenii 60.00 1.00e-148 521.00
IUUC-Mor-057073 Magnaporthe oryzae 30.06 1.00e-32 134.00
IUUC-Mpo-057378 Magnaporthe poae 27.05 2.00e-32 134.00
IUUC-Mtr-058761 Medicago truncatula 31.83 3.00e-33 137.00
IUUC-Mla-058840 Melampsora laricipopulina 37.25 3.00e-25 110.00
IUUC-Mga-060129 Meleagris gallopavo 65.58 4.00e-155 543.00
IUUC-Mvi-060424 Microbotryum violaceum 32.90 3.00e-24 106.00
IUUC-Mmr-061295 Microcebus murinus 67.26 0.00e+00 664.00
IUUC-Mdo-062295 Monodelphis domestica 62.96 0.00e+00 640.00
IUUC-Mmu-064009 Mus musculus 68.57 0.00e+00 662.00
IUUC-Mac-064855 Musa acuminata 30.62 6.00e-40 159.00
IUUC-Mpu-065875 Mustela putorius furo 69.41 0.00e+00 677.00
IUUC-Mlu-066941 Myotis lucifugus 72.37 0.00e+00 665.00
IUUC-Nfi-068518 Neosartorya fischeri 31.23 3.00e-36 146.00
IUUC-Ncr-068886 Neurospora crassa 29.10 1.00e-31 131.00
IUUC-Nle-069717 Nomascus leucogenys 67.08 0.00e+00 647.00
IUUC-Opr-070280 Ochotona princeps 86.57 6.00e-164 572.00
IUUC-Ont-071462 Oreochromis niloticus 68.01 8.00e-142 498.00
IUUC-Oan-073300 Ornithorhynchus anatinus 65.91 5.00e-179 622.00
IUUC-Ocu-074124 Oryctolagus cuniculus 67.15 0.00e+00 642.00
IUUC-Oba-075756 Oryza barthii 30.75 1.00e-30 128.00
IUUC-Obr-076580 Oryza brachyantha 30.73 9.00e-34 138.00
IUUC-Ogl-077759 Oryza glaberrima 32.09 1.00e-36 148.00
IUUC-Ogu-078657 Oryza glumaepatula 29.90 1.00e-30 128.00
IUUC-Oin-079481 Oryza indica 32.39 6.00e-32 132.00
IUUC-Olo-081062 Oryza longistaminata 36.90 7.00e-23 102.00
IUUC-Ome-081813 Oryza meridionalis 29.90 1.00e-30 128.00
IUUC-Oni-083007 Oryza nivara 29.90 1.00e-30 128.00
IUUC-Opu-083385 Oryza punctata 30.83 4.00e-30 126.00
IUUC-Oru-084861 Oryza rufipogon 29.90 1.00e-30 128.00
IUUC-Osa-085896 Oryza sativa 31.38 2.00e-36 146.00
IUUC-Ola-086693 Oryzias latipes 64.44 4.00e-128 452.00
IUUC-Olu-087631 Ostreococcus lucimarinus 47.30 1.00e-14 70.50
IUUC-Oga-088262 Otolemur garnettii 67.26 0.00e+00 644.00
IUUC-Oar-089658 Ovis aries 67.20 0.00e+00 641.00
IUUC-Ptr-091311 Pan troglodytes 67.08 0.00e+00 658.00
IUUC-Pan-091925 Papio anubis 67.44 0.00e+00 649.00
IUUC-Psi-093605 Pelodiscus sinensis 69.21 5.00e-153 535.00
IUUC-Pma-094163 Petromyzon marinus 76.02 4.00e-99 353.00
IUUC-Pno-094790 Phaeosphaeria nodorum 34.59 1.00e-20 94.40
IUUC-Ppa-095943 Physcomitrella patens 29.65 1.00e-45 178.00
IUUC-Pfo-096581 Poecilia formosa 71.18 7.00e-136 478.00
IUUC-Pab-098229 Pongo abelii 67.26 0.00e+00 647.00
IUUC-Pop-099598 Populus trichocarpa 32.10 1.00e-39 158.00
IUUC-Pca-100875 Procavia capensis 50.55 5.00e-106 379.00
IUUC-Ppe-101658 Prunus persica 37.06 7.00e-18 86.30
IUUC-Pva-102343 Pteropus vampyrus 65.90 0.00e+00 644.00
IUUC-Pgr-103275 Puccinia graminis 35.57 2.00e-18 87.40
IUUC-Ptt-104004 Puccinia triticina 40.00 9.00e-11 61.60
IUUC-Pte-104161 Pyrenophora teres 30.31 2.00e-29 124.00
IUUC-Pyt-104576 Pyrenophora triticirepentis 31.06 2.00e-30 126.00
IUUC-Rno-105264 Rattus norvegicus 68.04 0.00e+00 659.00
IUUC-Sce-106138 Saccharomyces cerevisiae 29.03 1.00e-38 154.00
IUUC-Sha-107497 Sarcophilus harrisii 69.27 0.00e+00 663.00
IUUC-Sja-107991 Schizosaccharomyces japonicus 33.13 2.00e-44 173.00
IUUC-Spo-108257 Schizosaccharomyces pombe 33.43 2.00e-46 180.00
IUUC-Ssl-108581 Sclerotinia sclerotiorum 30.06 7.00e-36 145.00
IUUC-Smo-109358 Selaginella moellendorffii 29.60 5.00e-33 135.00
IUUC-Sit-109920 Setaria italica 31.52 2.00e-37 151.00
IUUC-Sly-111616 Solanum lycopersicum 31.27 3.00e-42 167.00
IUUC-Stu-112648 Solanum tuberosum 28.90 3.00e-15 75.90
IUUC-Sar-113120 Sorex araneus 62.82 2.00e-135 478.00
IUUC-Sbi-113881 Sorghum bicolor 30.73 4.00e-37 150.00
IUUC-Sre-115127 Sporisorium reilianum 30.96 3.00e-46 179.00
IUUC-Ssc-116147 Sus scrofa 68.28 0.00e+00 655.00
IUUC-Tgu-117215 Taeniopygia guttata 66.26 1.00e-164 574.00
IUUC-Tru-118525 Takifugu rubripes 66.94 1.00e-134 472.00
IUUC-Tsy-119160 Tarsius syrichta 68.34 0.00e+00 660.00
IUUC-Tni-119816 Tetraodon nigroviridis 70.23 2.00e-83 301.00
IUUC-Tca-121727 Theobroma cacao 38.10 3.00e-18 87.40
IUUC-Tre-122181 Trichoderma reesei 30.06 2.00e-35 144.00
IUUC-Tvi-122316 Trichoderma virens 29.36 9.00e-35 141.00
IUUC-Tae-125227 Triticum aestivum 30.77 2.00e-28 120.00
IUUC-Tur-126827 Triticum urartu 37.50 8.00e-17 82.40
IUUC-Tme-126984 Tuber melanosporum 30.71 7.00e-44 172.00
IUUC-Tbe-127263 Tupaia belangeri 51.19 8.00e-122 432.00
IUUC-Ttr-128498 Tursiops truncatus 65.30 0.00e+00 639.00
IUUC-Uma-129457 Ustilago maydis 30.46 2.00e-45 176.00
IUUC-Vda-129986 Verticillium dahliae 29.94 2.00e-35 143.00
IUUC-Vpa-130795 Vicugna pacos 90.65 4.00e-113 403.00
IUUC-Vvi-131146 Vitis vinifera 36.90 2.00e-17 84.30
IUUC-Xtr-132789 Xenopus tropicalis 65.75 0.00e+00 665.00
IUUC-Xma-133011 Xiphophorus maculatus 70.47 2.00e-134 473.00
IUUC-Yli-134516 Yarrowia lipolytica 30.99 2.00e-38 153.00
IUUC-Zma-134699 Zea mays 31.98 3.00e-36 147.00
Created Date 25-Jun-2017

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