iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111290

Ensembl Protein ID

Solyc06g008590.2.1

UniProt Accession

G9HPW5; G9HPW5_SOLLC

Genbank Protein ID

AEX00360.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379444

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g008590.2	Solyc06g008590.2.1	Solyc06g008590.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.70e-16	60.3	94	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt...................elknsevalkYeDedGDlvtlksDedldkavsllas 72
           + vkvs++g+++++++dl+ + ++++L +a+++ +                     l+ s++ ++YeD+dGD++ l++D+++ ++v+    
   Q: 94   ILVKVSMDGAPYLRKVDLNMYKSYQELFDALTKmFNsftivqgmkdfmhegklmdLLNSSDYVPTYEDKDGDWM-LVGDVPWGMFVD---- 179
           79*******************************722566999999*********88888***************.************.... PP
   S: 73   kksllrlliqk 83
             s++rl+i+k
   Q: 180  --SCKRLRIMK 188
           ..********8 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MSSNKLDFEE TELRLGLPGG ARKNVYGDND TCNVNGKRGF VDLKLNLSSD INNIKNSTHK 60
TPAAKAQVVG WPPVRSFRKN ILTSQKLDRE NDNILVKVSM DGAPYLRKVD LNMYKSYQEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAGTTGCT AGTTTATCTC CTTTCTCTCC ACCCTATATA TTTTTAACTC TCACTTTTCT 60
ATCTCAAACC AAAAGTACTC TTAAAAAAAA TAACAAAAAA TGAGTAGTAA TAAGTTGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:543544

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ptr-090757	Pan troglodytes	57.89	6.80e-01	26.90
IUUC-Pab-098295	Pongo abelii	57.89	3.30e-01	27.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence