iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091343

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03118260

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000010532.4	ENSPTRT00000019430.4	ENSPTRP00000017986.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-32	109.6	107	142
UBD/Beta-Prp	3.80e-50	170.7	15	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSIRCWDCRSRR 142
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           +k l++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ + s ++++l sG+ d+ + +wd+ +gq+++
   Q: 15   QKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVR 103
           56788888899999999999999999999999999999999999999999999999999988889999999999999999999999999 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
             ++gh g vn+v++++++ ++ sGs D+ +r Wd   ++ + ++tl +   d v s+++++   e+++gs dg+v+ +dl+ g+    
   Q: 104  -KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCrsRRPEPVQTLDE-ARDGVSSVKVSD--HEVLAGSVDGRVRRYDLRMGQLFSD 188
           .999999999999999999999999999999999986677788999988.899999999999..7899999999999999998877666 PP
   S: 218  l 218
           +
   Q: 189  Y 189
           5 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAFPEPKPRP PELPQKRLKT LDCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAAGSFDNS SLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGCGGTCT GGAGGCTCAC GGGAGAGAGG CTGTAGCCCT GGGCAATCCC GGGGGTCGTT 60
ACAGGAAGGT AGGAAAATGC CACCCTCAGG GCACTGGTTG GGCTAAAGGT GACACTGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	96.82	3.00e-179	620.00
IUUC-Atr-002647	Amborella trichopoda	49.15	1.00e-89	322.00
IUUC-Aca-004948	Anolis carolinensis	79.62	7.00e-144	503.00
IUUC-Aly-006489	Arabidopsis lyrata	50.84	2.00e-82	298.00
IUUC-Ath-007099	Arabidopsis thaliana	50.51	4.00e-82	297.00
IUUC-Acl-008374	Aspergillus clavatus	37.33	1.00e-49	190.00
IUUC-Afl-008506	Aspergillus flavus	38.33	2.00e-51	195.00
IUUC-Afu-009098	Aspergillus fumigatus	33.84	2.00e-44	172.00
IUUC-Ang-009705	Aspergillus niger	34.52	2.00e-46	179.00
IUUC-Aor-010031	Aspergillus oryzae	38.33	2.00e-51	195.00
IUUC-Ame-011056	Astyanax mexicanus	72.67	4.00e-138	483.00
IUUC-Bgr-012109	Blumeria graminis	41.55	8.00e-57	213.00
IUUC-Bta-012476	Bos taurus	95.24	1.00e-177	614.00
IUUC-Bci-013860	Botrytis cinerea	36.15	3.00e-46	178.00
IUUC-Bdi-014565	Brachypodium distachyon	50.17	1.00e-87	316.00
IUUC-Bol-016204	Brassica oleracea	51.19	2.00e-82	298.00
IUUC-Bra-018093	Brassica rapa	51.19	4.00e-82	297.00
IUUC-Cel-018500	Caenorhabditis elegans	47.81	9.00e-85	306.00
IUUC-Cja-019279	Callithrix jacchus	98.41	2.00e-171	594.00
IUUC-Cfa-020516	Canis familiaris	96.51	2.00e-179	620.00
IUUC-Cpo-021427	Cavia porcellus	93.65	7.00e-166	575.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	46.15	9.00e-75	273.00
IUUC-Csa-023449	Chlorocebus sabaeus	98.41	3.00e-171	593.00
IUUC-Cin-025637	Ciona intestinalis	57.24	4.00e-106	377.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.85	2.00e-51	195.00
IUUC-Cne-026994	Cryptococcus neoformans	35.50	3.00e-50	192.00
IUUC-Dre-028239	Danio rerio	73.80	1.00e-132	465.00
IUUC-Dno-029408	Dasypus novemcinctus	93.97	1.00e-175	608.00
IUUC-Dor-030684	Dipodomys ordii	95.12	3.00e-112	397.00
IUUC-Dse-031344	Dothistroma septosporum	45.80	4.00e-54	204.00
IUUC-Dme-031634	Drosophila melanogaster	47.57	3.00e-77	281.00
IUUC-Ete-033126	Echinops telfairi	85.71	4.00e-157	546.00
IUUC-Eca-034356	Equus caballus	88.25	1.00e-155	542.00
IUUC-Eeu-035196	Erinaceus europaeus	94.67	3.00e-80	291.00
IUUC-Fca-036231	Felis catus	95.56	7.00e-178	615.00
IUUC-Fox-038076	Fusarium oxysporum	37.41	1.00e-53	202.00
IUUC-Fso-038093	Fusarium solani	35.97	2.00e-45	175.00
IUUC-Gmo-039056	Gadus morhua	73.27	1.00e-131	462.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.35	7.00e-44	171.00
IUUC-Gga-041042	Gallus gallus	78.36	3.00e-147	513.00
IUUC-Gac-042638	Gasterosteus aculeatus	73.93	8.00e-136	476.00
IUUC-Gma-042689	Glycine max	50.34	1.00e-89	323.00
IUUC-Ggo-044720	Gorilla gorilla	99.37	1.00e-172	598.00
IUUC-Hsa-046056	Homo sapiens	99.37	3.00e-173	600.00
IUUC-Hvu-047675	Hordeum vulgare	46.91	3.00e-85	308.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	94.06	3.00e-171	593.00
IUUC-Lch-050634	Latimeria chalumnae	78.55	3.00e-132	464.00
IUUC-Lpe-051470	Leersia perrieri	49.49	4.00e-87	314.00
IUUC-Loc-052452	Lepisosteus oculatus	77.89	2.00e-135	474.00
IUUC-Lma-053235	Leptosphaeria maculans	40.95	1.00e-27	116.00
IUUC-Laf-054315	Loxodonta africana	95.87	7.00e-169	585.00
IUUC-Mcc-054923	Macaca mulatta	98.41	2.00e-171	594.00
IUUC-Mor-056936	Magnaporthe oryzae	37.50	2.00e-46	179.00
IUUC-Mtr-058595	Medicago truncatula	52.11	2.00e-89	322.00
IUUC-Mla-058902	Melampsora laricipopulina	39.86	1.00e-60	226.00
IUUC-Mvi-060471	Microbotryum violaceum	42.95	4.00e-72	264.00
IUUC-Mmr-061665	Microcebus murinus	96.19	7.00e-179	619.00
IUUC-Mdo-062750	Monodelphis domestica	82.33	4.00e-135	473.00
IUUC-Mmu-063750	Mus musculus	93.33	6.00e-176	609.00
IUUC-Mac-065441	Musa acuminata	50.68	3.00e-89	321.00
IUUC-Mpu-066863	Mustela putorius furo	95.56	9.00e-178	615.00
IUUC-Mlu-067645	Myotis lucifugus	94.29	2.00e-175	607.00
IUUC-Nfi-068549	Neosartorya fischeri	36.69	1.00e-48	187.00
IUUC-Ncr-068816	Neurospora crassa	35.22	4.00e-42	165.00
IUUC-Nle-069457	Nomascus leucogenys	98.73	3.00e-172	597.00
IUUC-Opr-070874	Ochotona princeps	93.84	7.00e-76	276.00
IUUC-Ont-071674	Oreochromis niloticus	73.40	4.00e-121	427.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.37	3.00e-150	523.00
IUUC-Ocu-074186	Oryctolagus cuniculus	93.97	6.00e-170	589.00
IUUC-Oba-075414	Oryza barthii	50.90	6.00e-85	307.00
IUUC-Obr-076739	Oryza brachyantha	49.15	6.00e-86	310.00
IUUC-Ogl-076962	Oryza glaberrima	49.49	9.00e-87	313.00
IUUC-Ogu-078831	Oryza glumaepatula	49.49	8.00e-87	313.00
IUUC-Oin-079985	Oryza indica	49.15	9.00e-87	313.00
IUUC-Ome-081333	Oryza meridionalis	49.26	5.00e-79	287.00
IUUC-Oni-082558	Oryza nivara	49.15	9.00e-87	313.00
IUUC-Opu-084091	Oryza punctata	49.83	5.00e-88	317.00
IUUC-Oru-085253	Oryza rufipogon	49.45	2.00e-81	295.00
IUUC-Osa-086077	Oryza sativa	49.15	9.00e-87	313.00
IUUC-Ola-086946	Oryzias latipes	72.61	1.00e-135	475.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.32	9.00e-54	203.00
IUUC-Oga-088681	Otolemur garnettii	94.23	5.00e-174	603.00
IUUC-Oar-089913	Ovis aries	94.29	8.00e-175	605.00
IUUC-Pan-092078	Papio anubis	98.41	3.00e-171	593.00
IUUC-Psi-093190	Pelodiscus sinensis	79.81	6.00e-150	523.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.13	2.00e-53	202.00
IUUC-Ppa-095777	Physcomitrella patens	49.83	6.00e-89	320.00
IUUC-Pfo-097153	Poecilia formosa	74.92	1.00e-129	455.00
IUUC-Pab-098307	Pongo abelii	98.10	2.00e-169	588.00
IUUC-Pop-099315	Populus trichocarpa	52.04	6.00e-84	303.00
IUUC-Pca-100538	Procavia capensis	94.78	9.00e-150	522.00
IUUC-Ppe-101632	Prunus persica	49.15	3.00e-89	321.00
IUUC-Pva-102484	Pteropus vampyrus	97.14	2.00e-180	624.00
IUUC-Pgr-103495	Puccinia graminis	38.87	4.00e-63	234.00
IUUC-Ptt-103975	Puccinia triticina	38.52	1.00e-61	229.00
IUUC-Pte-104354	Pyrenophora teres	36.96	7.00e-42	164.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.68	1.00e-41	163.00
IUUC-Rno-105655	Rattus norvegicus	92.70	1.00e-174	605.00
IUUC-Sha-107130	Sarcophilus harrisii	83.12	9.00e-111	392.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.57	2.00e-57	215.00
IUUC-Spo-108131	Schizosaccharomyces pombe	40.52	2.00e-57	215.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	36.15	1.00e-46	180.00
IUUC-Smo-108996	Selaginella moellendorffii	48.46	2.00e-80	291.00
IUUC-Sit-110508	Setaria italica	50.17	5.00e-88	317.00
IUUC-Sly-111093	Solanum lycopersicum	48.98	1.00e-80	292.00
IUUC-Stu-112380	Solanum tuberosum	48.98	1.00e-80	292.00
IUUC-Sar-113127	Sorex araneus	88.97	4.00e-71	261.00
IUUC-Sbi-114461	Sorghum bicolor	49.15	2.00e-86	311.00
IUUC-Sre-115020	Sporisorium reilianum	38.16	6.00e-42	166.00
IUUC-Ssc-115632	Sus scrofa	96.46	2.00e-177	614.00
IUUC-Tru-118039	Takifugu rubripes	71.62	1.00e-127	449.00
IUUC-Tsy-119239	Tarsius syrichta	98.82	2.00e-96	345.00
IUUC-Tni-120097	Tetraodon nigroviridis	69.40	3.00e-125	441.00
IUUC-Tca-121695	Theobroma cacao	52.04	2.00e-92	332.00
IUUC-Tre-122182	Trichoderma reesei	37.46	1.00e-49	190.00
IUUC-Tvi-122429	Trichoderma virens	37.37	1.00e-52	199.00
IUUC-Tae-125136	Triticum aestivum	50.85	2.00e-89	322.00
IUUC-Tur-126216	Triticum urartu	50.85	5.00e-90	323.00
IUUC-Tme-127030	Tuber melanosporum	43.75	1.00e-62	233.00
IUUC-Tbe-127686	Tupaia belangeri	93.65	2.00e-102	365.00
IUUC-Ttr-128770	Tursiops truncatus	94.60	3.00e-177	613.00
IUUC-Uma-129446	Ustilago maydis	35.03	3.00e-37	150.00
IUUC-Vda-129680	Verticillium dahliae	39.34	6.00e-42	164.00
IUUC-Vvi-131292	Vitis vinifera	51.54	5.00e-91	327.00
IUUC-Xtr-132204	Xenopus tropicalis	75.48	5.00e-144	503.00
IUUC-Xma-133727	Xiphophorus maculatus	73.72	5.00e-129	453.00
IUUC-Zma-135908	Zea mays	49.15	5.00e-81	294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence