iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115632

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856041

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000013722.2	ENSSSCT00000014996.2	ENSSSCP00000014592.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-32	110.8	107	142
UBD/Beta-Prp	2.00e-50	171.9	15	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D ++++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSVRCWDCRSRK 142
           8**********54489***************98865 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           +k l++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ + s ++++l sG+ d+ + +wd+ +gq+++
   Q: 15   QKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVR 103
           56678888888999999999999999999999999999999999999999999999998888888999999999999999999999998 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
             ++gh g vn+v++++++ ++ sGs D+ vr Wd   +  + ++tl +   d + s+++++   e+++gs dg+v+ +dl+ g+    
   Q: 104  -KFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCrsRKPEPVQTLDE-ARDGISSVKVSD--HEVLAGSVDGRVRRYDLRMGQLFSD 188
           .899999999999999999999999999999999985555667888987.899999999988..6899999999999999988876665 PP
   S: 218  l 218
           +
   Q: 189  Y 189
           5 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAFPEPKPRG PELPQKRLKT LDCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAAGSFDNS SLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAAGGC TTTTGGAGTA ACGCCCTCAG CCCTCGTGCT TCCGTTCCTA ACGGCGGGGG 60
CCGGAACTCT CCCAGCTAGG GGAAAGAATT GGAAGCCAAA AGTATTCCTA GAAAACAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ssc:100519823

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	97.11	1.00e-180	624.00
IUUC-Atr-002647	Amborella trichopoda	49.15	2.00e-89	321.00
IUUC-Aca-004948	Anolis carolinensis	80.39	7.00e-145	506.00
IUUC-Aly-006489	Arabidopsis lyrata	50.51	5.00e-82	297.00
IUUC-Ath-007099	Arabidopsis thaliana	49.83	2.00e-81	295.00
IUUC-Acl-008374	Aspergillus clavatus	36.33	7.00e-49	187.00
IUUC-Afl-008506	Aspergillus flavus	38.00	3.00e-51	195.00
IUUC-Afu-009098	Aspergillus fumigatus	32.93	3.00e-43	169.00
IUUC-Ang-009705	Aspergillus niger	34.19	1.00e-46	180.00
IUUC-Aor-010031	Aspergillus oryzae	38.00	4.00e-51	194.00
IUUC-Ame-011056	Astyanax mexicanus	72.35	1.00e-138	485.00
IUUC-Bgr-012109	Blumeria graminis	41.20	1.00e-55	209.00
IUUC-Bta-012476	Bos taurus	96.46	6.00e-180	622.00
IUUC-Bci-013860	Botrytis cinerea	36.05	1.00e-45	176.00
IUUC-Bdi-014565	Brachypodium distachyon	49.83	2.00e-87	315.00
IUUC-Bol-016204	Brassica oleracea	50.85	4.00e-82	297.00
IUUC-Bra-018093	Brassica rapa	50.85	8.00e-82	296.00
IUUC-Cel-018500	Caenorhabditis elegans	48.12	3.00e-84	304.00
IUUC-Cja-019279	Callithrix jacchus	96.14	7.00e-169	585.00
IUUC-Cfa-020516	Canis familiaris	96.78	3.00e-180	623.00
IUUC-Cpo-021427	Cavia porcellus	93.25	3.00e-167	580.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	46.49	8.00e-75	273.00
IUUC-Csa-023449	Chlorocebus sabaeus	95.82	2.00e-167	581.00
IUUC-Cin-025637	Ciona intestinalis	58.02	5.00e-107	380.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	38.19	8.00e-52	197.00
IUUC-Cne-026994	Cryptococcus neoformans	35.83	1.00e-50	192.00
IUUC-Dre-028239	Danio rerio	74.84	4.00e-132	463.00
IUUC-Dno-029408	Dasypus novemcinctus	94.21	4.00e-176	609.00
IUUC-Dor-030684	Dipodomys ordii	93.03	9.00e-111	392.00
IUUC-Dse-031344	Dothistroma septosporum	45.52	3.00e-54	204.00
IUUC-Dme-031634	Drosophila melanogaster	47.57	3.00e-76	278.00
IUUC-Ete-033126	Echinops telfairi	86.17	8.00e-159	552.00
IUUC-Eca-034356	Equus caballus	87.46	1.00e-155	541.00
IUUC-Eeu-035196	Erinaceus europaeus	92.31	2.00e-79	288.00
IUUC-Fca-036231	Felis catus	95.82	6.00e-179	619.00
IUUC-Fox-038076	Fusarium oxysporum	35.65	2.00e-54	206.00
IUUC-Fso-038093	Fusarium solani	34.72	3.00e-46	178.00
IUUC-Gmo-039056	Gadus morhua	72.67	2.00e-132	464.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.63	2.00e-45	176.00
IUUC-Gga-041042	Gallus gallus	77.81	1.00e-148	518.00
IUUC-Gac-042638	Gasterosteus aculeatus	73.53	1.00e-135	474.00
IUUC-Gma-042689	Glycine max	50.34	3.00e-89	321.00
IUUC-Ggo-044720	Gorilla gorilla	97.11	1.00e-169	588.00
IUUC-Hsa-046056	Homo sapiens	96.46	5.00e-169	586.00
IUUC-Hvu-047675	Hordeum vulgare	46.63	9.00e-85	306.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	94.74	1.00e-172	598.00
IUUC-Lch-050634	Latimeria chalumnae	77.96	1.00e-131	462.00
IUUC-Lpe-051470	Leersia perrieri	49.15	7.00e-87	313.00
IUUC-Loc-052452	Lepisosteus oculatus	76.90	9.00e-134	469.00
IUUC-Lma-053235	Leptosphaeria maculans	41.13	1.00e-27	116.00
IUUC-Laf-054315	Loxodonta africana	95.82	1.00e-167	581.00
IUUC-Mcc-054923	Macaca mulatta	95.82	1.00e-167	581.00
IUUC-Mor-056936	Magnaporthe oryzae	38.51	8.00e-47	180.00
IUUC-Mtr-058595	Medicago truncatula	52.11	4.00e-89	320.00
IUUC-Mla-058902	Melampsora laricipopulina	41.28	1.00e-62	232.00
IUUC-Mvi-060471	Microbotryum violaceum	43.62	1.00e-71	262.00
IUUC-Mmr-061665	Microcebus murinus	96.14	2.00e-178	617.00
IUUC-Mdo-062750	Monodelphis domestica	82.33	2.00e-134	471.00
IUUC-Mmu-063750	Mus musculus	93.57	2.00e-175	607.00
IUUC-Mac-065441	Musa acuminata	51.01	8.00e-90	323.00
IUUC-Mpu-066863	Mustela putorius furo	96.78	4.00e-180	622.00
IUUC-Mlu-067645	Myotis lucifugus	94.53	5.00e-177	612.00
IUUC-Nfi-068549	Neosartorya fischeri	35.71	9.00e-48	184.00
IUUC-Ncr-068816	Neurospora crassa	36.05	1.00e-42	166.00
IUUC-Nle-069457	Nomascus leucogenys	96.14	2.00e-168	584.00
IUUC-Opr-070874	Ochotona princeps	94.37	2.00e-76	278.00
IUUC-Ont-071674	Oreochromis niloticus	73.95	2.00e-121	428.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.10	3.00e-150	523.00
IUUC-Ocu-074186	Oryctolagus cuniculus	92.60	1.00e-168	585.00
IUUC-Oba-075414	Oryza barthii	50.54	2.00e-84	305.00
IUUC-Obr-076739	Oryza brachyantha	49.15	1.00e-85	308.00
IUUC-Ogl-076962	Oryza glaberrima	49.15	2.00e-86	311.00
IUUC-Ogu-078831	Oryza glumaepatula	49.49	2.00e-86	311.00
IUUC-Oin-079985	Oryza indica	49.15	2.00e-86	311.00
IUUC-Ome-081333	Oryza meridionalis	48.72	1.00e-78	286.00
IUUC-Oni-082558	Oryza nivara	49.15	2.00e-86	311.00
IUUC-Opu-084091	Oryza punctata	49.49	9.00e-88	316.00
IUUC-Oru-085253	Oryza rufipogon	49.45	6.00e-81	293.00
IUUC-Osa-086077	Oryza sativa	49.15	2.00e-86	311.00
IUUC-Ola-086946	Oryzias latipes	72.99	7.00e-135	473.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.32	3.00e-54	204.00
IUUC-Oga-088681	Otolemur garnettii	94.21	9.00e-175	605.00
IUUC-Oar-089913	Ovis aries	95.18	3.00e-176	610.00
IUUC-Ptr-091343	Pan troglodytes	96.46	4.00e-167	580.00
IUUC-Pan-092078	Papio anubis	95.82	2.00e-167	581.00
IUUC-Psi-093190	Pelodiscus sinensis	79.68	4.00e-150	523.00
IUUC-Pno-095078	Phaeosphaeria nodorum	40.22	2.00e-54	205.00
IUUC-Ppa-095777	Physcomitrella patens	49.83	4.00e-89	320.00
IUUC-Pfo-097153	Poecilia formosa	75.25	2.00e-129	454.00
IUUC-Pab-098307	Pongo abelii	95.51	1.00e-165	575.00
IUUC-Pop-099315	Populus trichocarpa	51.36	3.00e-83	301.00
IUUC-Pca-100538	Procavia capensis	92.94	2.00e-148	517.00
IUUC-Ppe-101632	Prunus persica	48.14	7.00e-88	316.00
IUUC-Pva-102484	Pteropus vampyrus	96.78	1.00e-180	624.00
IUUC-Pgr-103495	Puccinia graminis	40.07	9.00e-64	236.00
IUUC-Ptt-103975	Puccinia triticina	39.01	3.00e-62	231.00
IUUC-Pte-104354	Pyrenophora teres	37.68	1.00e-42	166.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	38.41	2.00e-42	166.00
IUUC-Rno-105655	Rattus norvegicus	93.25	3.00e-174	603.00
IUUC-Sha-107130	Sarcophilus harrisii	82.20	8.00e-111	392.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.93	6.00e-58	217.00
IUUC-Spo-108131	Schizosaccharomyces pombe	40.15	2.00e-57	215.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	35.43	5.00e-46	177.00
IUUC-Smo-108996	Selaginella moellendorffii	48.81	3.00e-80	291.00
IUUC-Sit-110508	Setaria italica	49.83	9.00e-88	316.00
IUUC-Sly-111093	Solanum lycopersicum	48.64	4.00e-80	290.00
IUUC-Stu-112380	Solanum tuberosum	48.64	4.00e-80	290.00
IUUC-Sar-113127	Sorex araneus	88.73	1.00e-70	259.00
IUUC-Sbi-114461	Sorghum bicolor	48.81	4.00e-86	310.00
IUUC-Sre-115020	Sporisorium reilianum	37.50	4.00e-41	162.00
IUUC-Tru-118039	Takifugu rubripes	71.90	3.00e-127	447.00
IUUC-Tsy-119239	Tarsius syrichta	97.04	1.00e-95	342.00
IUUC-Tni-120097	Tetraodon nigroviridis	69.84	1.00e-123	435.00
IUUC-Tca-121695	Theobroma cacao	52.04	4.00e-92	330.00
IUUC-Tre-122182	Trichoderma reesei	37.94	7.00e-51	194.00
IUUC-Tvi-122429	Trichoderma virens	37.87	1.00e-53	203.00
IUUC-Tae-125136	Triticum aestivum	50.51	4.00e-89	320.00
IUUC-Tur-126216	Triticum urartu	50.84	7.00e-89	320.00
IUUC-Tme-127030	Tuber melanosporum	43.75	6.00e-62	230.00
IUUC-Tbe-127686	Tupaia belangeri	94.18	8.00e-103	366.00
IUUC-Ttr-128770	Tursiops truncatus	94.86	1.00e-177	615.00
IUUC-Uma-129446	Ustilago maydis	36.04	3.00e-37	150.00
IUUC-Vda-129680	Verticillium dahliae	39.34	4.00e-42	164.00
IUUC-Vvi-131292	Vitis vinifera	51.54	1.00e-90	325.00
IUUC-Xtr-132204	Xenopus tropicalis	75.88	4.00e-145	506.00
IUUC-Xma-133727	Xiphophorus maculatus	73.87	2.00e-128	451.00
IUUC-Zma-135908	Zea mays	48.81	1.00e-80	292.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence