iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135548

Ensembl Protein ID

Zm00001d010850_T003

UniProt Accession

B4FLB4; B4FLB4_MAIZE

Genbank Protein ID

ACF82907.1; ACG41580.1; AQK95085.1

Protein Name

Glutamate-rich WD repeat-containing protein 1; Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

BT037902; EU969462; CM000784

Gene Name

ZEAMMB73_Zm00001d010850

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d010850	Zm00001d010850_T002	Zm00001d010850_T002
Zm00001d010850	Zm00001d010850_T003	Zm00001d010850_T003
Zm00001d010850	Zm00001d010850_T004	Zm00001d010850_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-22	79.9	271	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++sv +l++  ++ ++++s+s Dgti +WD+rtg++++
   Q: 271  GHSASVEDLQWspTEaDIFASCSVDGTISIWDIRTGKKPC 310
           8***********66699*******************9886 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGRTIKKAKK AQSKKSKKKT ESSSSSNPAI ASGPAKVWQP GVDTLEDGEE LQFDPQAYNY 60
LRGFGIGWSC LSFDVVRDQL GLVRSEFPHT FYGVAGTQAE KASWNYIGVF KLSNISGKKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAAATCGT GGGGTTTGGG GTTTGGGTGC TTCTCTACGG CCGCCGCCAG CACCGAGTTC 60
CGGACCTCCG CCGCCTCGTC TCCGCTCCCT CGCACTCGCA CTCGCAGCTC CGGCTGCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	78.18	0.00e+00	663.00
IUUC-Aml-002309	Ailuropoda melanoleuca	43.02	1.00e-92	333.00
IUUC-Atr-002461	Amborella trichopoda	66.44	8.00e-158	549.00
IUUC-Aca-004760	Anolis carolinensis	44.44	7.00e-87	313.00
IUUC-Aly-005405	Arabidopsis lyrata	64.71	7.00e-161	559.00
IUUC-Ath-007178	Arabidopsis thaliana	64.85	4.00e-163	567.00
IUUC-Ago-007735	Ashbya gossypii	36.19	6.00e-70	257.00
IUUC-Acl-008294	Aspergillus clavatus	37.25	5.00e-73	267.00
IUUC-Afl-008486	Aspergillus flavus	37.16	2.00e-73	269.00
IUUC-Afu-009019	Aspergillus fumigatus	37.39	3.00e-72	265.00
IUUC-Ani-009465	Aspergillus nidulans	38.18	7.00e-73	267.00
IUUC-Ang-009641	Aspergillus niger	38.51	3.00e-70	258.00
IUUC-Ate-010426	Aspergillus terreus	37.25	2.00e-73	269.00
IUUC-Ame-010856	Astyanax mexicanus	44.39	5.00e-88	317.00
IUUC-Bgr-012258	Blumeria graminis	36.14	7.00e-61	227.00
IUUC-Bta-012437	Bos taurus	43.55	5.00e-92	330.00
IUUC-Bci-013647	Botrytis cinerea	38.95	6.00e-74	271.00
IUUC-Bdi-014728	Brachypodium distachyon	84.42	0.00e+00	749.00
IUUC-Cel-018454	Caenorhabditis elegans	41.80	4.00e-87	314.00
IUUC-Cja-018859	Callithrix jacchus	42.40	3.00e-91	328.00
IUUC-Cfa-020912	Canis familiaris	42.89	3.00e-92	331.00
IUUC-Cpo-021368	Cavia porcellus	45.06	2.00e-93	335.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	38.13	6.00e-69	254.00
IUUC-Csa-023599	Chlorocebus sabaeus	43.55	1.00e-94	339.00
IUUC-Cin-025718	Ciona intestinalis	44.26	2.00e-93	335.00
IUUC-Csv-025806	Ciona savignyi	49.50	4.00e-76	277.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	35.54	7.00e-60	224.00
IUUC-Cne-026781	Cryptococcus neoformans	39.46	2.00e-77	282.00
IUUC-Dre-028225	Danio rerio	44.99	2.00e-88	319.00
IUUC-Dno-029792	Dasypus novemcinctus	44.67	2.00e-89	322.00
IUUC-Dse-031289	Dothistroma septosporum	39.41	9.00e-72	263.00
IUUC-Dme-031676	Drosophila melanogaster	41.86	4.00e-89	321.00
IUUC-Eca-033618	Equus caballus	44.70	2.00e-91	328.00
IUUC-Fca-036102	Felis catus	45.08	5.00e-93	334.00
IUUC-Fox-037899	Fusarium oxysporum	38.32	3.00e-71	261.00
IUUC-Fso-038130	Fusarium solani	38.55	1.00e-71	263.00
IUUC-Gmo-038741	Gadus morhua	41.92	9.00e-85	306.00
IUUC-Ggr-040086	Gaeumannomyces graminis	37.70	7.00e-71	260.00
IUUC-Gac-042243	Gasterosteus aculeatus	42.29	7.00e-87	313.00
IUUC-Gma-044177	Glycine max	70.02	2.00e-168	585.00
IUUC-Ggo-044564	Gorilla gorilla	43.32	4.00e-94	337.00
IUUC-Hsa-046021	Homo sapiens	43.78	5.00e-95	340.00
IUUC-Hvu-047721	Hordeum vulgare	77.90	0.00e+00	668.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	42.89	9.00e-89	320.00
IUUC-Kpa-049271	Komagataella pastoris	36.36	7.00e-70	257.00
IUUC-Lch-049974	Latimeria chalumnae	41.31	3.00e-86	311.00
IUUC-Lpe-051388	Leersia perrieri	74.59	0.00e+00	625.00
IUUC-Lma-053010	Leptosphaeria maculans	36.88	9.00e-67	247.00
IUUC-Laf-054058	Loxodonta africana	44.60	7.00e-94	337.00
IUUC-Mcc-055246	Macaca mulatta	43.75	1.00e-94	339.00
IUUC-Meu-056795	Macropus eugenii	43.62	4.00e-89	321.00
IUUC-Mor-057175	Magnaporthe oryzae	37.18	3.00e-70	259.00
IUUC-Mpo-057388	Magnaporthe poae	36.00	6.00e-58	217.00
IUUC-Mtr-057752	Medicago truncatula	67.12	2.00e-164	571.00
IUUC-Mla-058904	Melampsora laricipopulina	39.56	3.00e-72	265.00
IUUC-Mvi-060525	Microbotryum violaceum	39.41	3.00e-73	268.00
IUUC-Mmr-060905	Microcebus murinus	44.68	4.00e-92	331.00
IUUC-Mmu-063428	Mus musculus	42.82	6.00e-92	330.00
IUUC-Mac-065276	Musa acuminata	73.17	0.00e+00	631.00
IUUC-Mpu-066062	Mustela putorius furo	44.04	1.00e-92	332.00
IUUC-Mlu-068115	Myotis lucifugus	50.23	4.00e-57	213.00
IUUC-Nfi-068512	Neosartorya fischeri	37.47	2.00e-71	262.00
IUUC-Ncr-068629	Neurospora crassa	37.02	2.00e-68	252.00
IUUC-Nle-070016	Nomascus leucogenys	43.88	3.00e-91	328.00
IUUC-Ont-072230	Oreochromis niloticus	42.06	3.00e-87	315.00
IUUC-Oan-072759	Ornithorhynchus anatinus	32.39	1.00e-55	209.00
IUUC-Ocu-074511	Oryctolagus cuniculus	43.78	4.00e-89	321.00
IUUC-Oba-075093	Oryza barthii	82.15	0.00e+00	689.00
IUUC-Obr-076130	Oryza brachyantha	84.28	0.00e+00	726.00
IUUC-Ogl-077397	Oryza glaberrima	85.35	0.00e+00	733.00
IUUC-Ogu-078111	Oryza glumaepatula	83.25	0.00e+00	659.00
IUUC-Oin-079162	Oryza indica	82.84	0.00e+00	704.00
IUUC-Olo-080909	Oryza longistaminata	70.37	0.00e+00	654.00
IUUC-Ome-081768	Oryza meridionalis	82.68	0.00e+00	657.00
IUUC-Oni-082453	Oryza nivara	83.92	0.00e+00	704.00
IUUC-Opu-084133	Oryza punctata	82.95	0.00e+00	629.00
IUUC-Oru-085056	Oryza rufipogon	82.22	1.00e-168	585.00
IUUC-Osa-085735	Oryza sativa	85.35	0.00e+00	733.00
IUUC-Ola-087066	Oryzias latipes	42.52	5.00e-84	304.00
IUUC-Oga-087974	Otolemur garnettii	43.78	1.00e-92	332.00
IUUC-Oar-089902	Ovis aries	43.78	9.00e-92	330.00
IUUC-Ptr-090469	Pan troglodytes	41.20	2.00e-87	315.00
IUUC-Pan-092858	Papio anubis	43.55	1.00e-94	339.00
IUUC-Psi-094092	Pelodiscus sinensis	35.24	5.00e-42	164.00
IUUC-Pno-094919	Phaeosphaeria nodorum	36.49	9.00e-64	237.00
IUUC-Ppa-095849	Physcomitrella patens	58.82	4.00e-146	510.00
IUUC-Pfo-096535	Poecilia formosa	43.95	8.00e-88	317.00
IUUC-Pab-098478	Pongo abelii	43.32	6.00e-94	337.00
IUUC-Pop-100032	Populus trichocarpa	66.06	8.00e-163	566.00
IUUC-Pca-100403	Procavia capensis	46.48	6.00e-70	256.00
IUUC-Ppe-101997	Prunus persica	69.84	2.00e-172	598.00
IUUC-Pva-102423	Pteropus vampyrus	44.72	5.00e-93	334.00
IUUC-Pgr-103339	Puccinia graminis	40.45	7.00e-80	291.00
IUUC-Ptt-103937	Puccinia triticina	38.37	4.00e-75	275.00
IUUC-Pte-104051	Pyrenophora teres	36.65	5.00e-67	248.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	36.88	2.00e-67	249.00
IUUC-Rno-106118	Rattus norvegicus	43.31	1.00e-87	316.00
IUUC-Sce-106330	Saccharomyces cerevisiae	35.87	2.00e-65	243.00
IUUC-Sha-106564	Sarcophilus harrisii	42.28	3.00e-74	271.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	38.60	9.00e-76	276.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	38.95	9.00e-75	273.00
IUUC-Smo-109619	Selaginella moellendorffii	54.50	8.00e-134	469.00
IUUC-Sit-110719	Setaria italica	94.26	0.00e+00	826.00
IUUC-Sly-111245	Solanum lycopersicum	63.58	3.00e-152	531.00
IUUC-Stu-112645	Solanum tuberosum	67.12	2.00e-162	565.00
IUUC-Sar-113342	Sorex araneus	42.48	3.00e-82	298.00
IUUC-Sbi-114359	Sorghum bicolor	95.62	0.00e+00	845.00
IUUC-Sre-115098	Sporisorium reilianum	39.29	9.00e-78	283.00
IUUC-Ssc-115496	Sus scrofa	44.50	2.00e-92	332.00
IUUC-Tru-117662	Takifugu rubripes	42.72	5.00e-85	307.00
IUUC-Tni-120564	Tetraodon nigroviridis	41.30	1.00e-70	259.00
IUUC-Tca-121710	Theobroma cacao	68.35	4.00e-167	580.00
IUUC-Tre-122239	Trichoderma reesei	39.81	9.00e-76	276.00
IUUC-Tvi-122589	Trichoderma virens	39.58	9.00e-76	276.00
IUUC-Tae-125574	Triticum aestivum	82.47	0.00e+00	727.00
IUUC-Tur-126135	Triticum urartu	76.70	1.00e-152	532.00
IUUC-Ttr-128383	Tursiops truncatus	44.04	1.00e-89	322.00
IUUC-Uma-129345	Ustilago maydis	39.16	1.00e-79	290.00
IUUC-Vda-129893	Verticillium dahliae	37.56	5.00e-71	261.00
IUUC-Vvi-131067	Vitis vinifera	70.23	8.00e-175	605.00
IUUC-Xtr-132603	Xenopus tropicalis	45.58	4.00e-97	348.00
IUUC-Xma-133149	Xiphophorus maculatus	43.43	1.00e-87	316.00
IUUC-Yli-134459	Yarrowia lipolytica	37.53	2.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence