iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116429

Ensembl Protein ID

ENSSSCP00000010698.2

UniProt Accession

F1RPB9; F1RPB9_PIG

Genbank Protein ID

ENSSSCP00000010698

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CT573021

Gene Name

PATZ1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000010027.2	ENSSSCT00000010984.2	ENSSSCP00000010698.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.00e-13	51.7	53	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees......................ksklmveikdvqpevfrallkFlYtgkl 65
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l ++                        + + e++ ++ +vf ++l+F Yt+++
   Q: 53   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGgtaeggpadvggaaaapgggagG-SRELEMHTISSKVFGDILDFAYTSRI 138
           8**********************************999********************54.8899999****************997 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

TEPGAGTEGV AAMERVNDAS CGPSGCYTYQ VSRHSTEMLH NLNQQRKNGG RFCDVLLRVG 60
DESFPAHRAV LAACSEYFES VFSAQLGDGG TAEGGPADVG GAAAAPGGGA GGSRELEMHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTTTTT CTGCAAGCGA GGGGGGGGGT GTTGTTGGTA TCGCCCCCTC CTTCTCCTCC 60
CCCCAGGGGT GAAAGTGCAA GAGGAAGTGC AGCCGCTGCC ATCTTTCCTC CGCTCCGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR023413--GFP-like
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR029037--YfgJ-like
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001393	Ailuropoda melanoleuca	92.43	0.00e+00	1155.00
IUUC-Acl-008012	Aspergillus clavatus	34.15	1.00e-04	37.70
IUUC-Ame-010861	Astyanax mexicanus	54.66	0.00e+00	647.00
IUUC-Bta-012647	Bos taurus	92.43	0.00e+00	1154.00
IUUC-Cja-019987	Callithrix jacchus	91.44	0.00e+00	1117.00
IUUC-Cfa-020091	Canis familiaris	92.58	0.00e+00	1155.00
IUUC-Cpo-021731	Cavia porcellus	91.41	0.00e+00	1136.00
IUUC-Csa-023323	Chlorocebus sabaeus	99.00	0.00e+00	937.00
IUUC-Cho-024339	Choloepus hoffmanni	96.64	9.00e-105	374.00
IUUC-Dre-028776	Danio rerio	58.99	0.00e+00	676.00
IUUC-Dno-028988	Dasypus novemcinctus	91.28	0.00e+00	1051.00
IUUC-Eca-034224	Equus caballus	98.76	0.00e+00	1181.00
IUUC-Fca-035834	Felis catus	99.22	0.00e+00	1178.00
IUUC-Gmo-038564	Gadus morhua	52.16	0.00e+00	637.00
IUUC-Gga-040923	Gallus gallus	81.29	0.00e+00	1031.00
IUUC-Gac-042115	Gasterosteus aculeatus	52.97	0.00e+00	667.00
IUUC-Ggo-045483	Gorilla gorilla	92.14	0.00e+00	1154.00
IUUC-Hsa-045831	Homo sapiens	91.99	0.00e+00	1126.00
IUUC-Itr-048966	Ictidomys tridecemlineatus	92.29	0.00e+00	1153.00
IUUC-Lch-050298	Latimeria chalumnae	65.85	0.00e+00	822.00
IUUC-Laf-053714	Loxodonta africana	91.85	0.00e+00	1163.00
IUUC-Mcc-055844	Macaca mulatta	86.12	0.00e+00	962.00
IUUC-Mmr-061004	Microcebus murinus	88.71	0.00e+00	1097.00
IUUC-Mdo-061816	Monodelphis domestica	89.55	0.00e+00	983.00
IUUC-Mmu-063774	Mus musculus	91.56	0.00e+00	1146.00
IUUC-Mpu-066238	Mustela putorius furo	99.60	0.00e+00	934.00
IUUC-Mlu-068149	Myotis lucifugus	92.58	0.00e+00	1154.00
IUUC-Opr-071017	Ochotona princeps	87.64	0.00e+00	742.00
IUUC-Ont-072352	Oreochromis niloticus	58.75	0.00e+00	724.00
IUUC-Oan-073423	Ornithorhynchus anatinus	86.21	0.00e+00	1091.00
IUUC-Ocu-074291	Oryctolagus cuniculus	98.80	0.00e+00	931.00
IUUC-Oga-088646	Otolemur garnettii	92.29	0.00e+00	1146.00
IUUC-Oar-089847	Ovis aries	94.74	0.00e+00	1119.00
IUUC-Ptr-091669	Pan troglodytes	92.14	0.00e+00	1154.00
IUUC-Pfo-097307	Poecilia formosa	56.45	0.00e+00	675.00
IUUC-Pab-097693	Pongo abelii	92.14	0.00e+00	1152.00
IUUC-Pca-100274	Procavia capensis	82.83	1.00e-140	493.00
IUUC-Pva-102261	Pteropus vampyrus	92.43	0.00e+00	1155.00
IUUC-Ptt-103895	Puccinia triticina	38.10	5.00e-06	44.70
IUUC-Rno-105339	Rattus norvegicus	98.28	0.00e+00	1170.00
IUUC-Tgu-116916	Taeniopygia guttata	88.39	0.00e+00	986.00
IUUC-Tru-117811	Takifugu rubripes	54.42	0.00e+00	675.00
IUUC-Tni-120697	Tetraodon nigroviridis	56.19	0.00e+00	657.00
IUUC-Ttr-128276	Tursiops truncatus	92.43	0.00e+00	1153.00
IUUC-Xtr-131778	Xenopus tropicalis	67.25	0.00e+00	806.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence