iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129765

Ensembl Protein ID

EGY18004

UniProt Accession

G2XDV6; G2XDV6_VERDV

Genbank Protein ID

EGY18004.1

Protein Name

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

Genbank Nucleotide ID

DS572714

Gene Name

VDAG_08338

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_08338	EGY18004	EGY18004

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	35.57	0.00e+00	739.00	IUUC-Spo-108229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MAKKAKDQAA SQASASQPAT GKDKDKGKDK AKDKDAPKGK KGAPSLIEQA AGPVGPPKPT 60
AKQIIGGASW TGKLPVNLFN EYCQKQQWEK PDYNMRKTPE GYSCLITLSA KDPKTKEMIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGA AAGCCAAGGA TCAGGCCGCC TCGCAGGCGT CGGCCTCGCA GCCTGCCACC 60
GGCAAGGACA AGGACAAGGG CAAGGATAAG GCCAAGGACA AAGATGCGCC CAAGGGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR011545--DEAD/DEAH_box_helicase_dom
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR011709--DUF1605
IPR007502--Helicase-assoc_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR009060--UBA-like
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00270--DEAD
PF04408--HA2
PF00271--Helicase_C
PF07717--OB_NTP_bind

SMART

SM00487--DEXDc
SM00847--HA2
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003676--F:nucleic acid binding

KEGG

vda:VDAG_08338

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001779	Ailuropoda melanoleuca	34.18	8.00e-122	429.00
IUUC-Apl-003596	Anas platyrhynchos	34.35	1.00e-140	492.00
IUUC-Ago-007773	Ashbya gossypii	33.50	0.00e+00	684.00
IUUC-Acl-008083	Aspergillus clavatus	52.05	0.00e+00	1229.00
IUUC-Afl-008510	Aspergillus flavus	51.76	0.00e+00	1226.00
IUUC-Afu-008922	Aspergillus fumigatus	52.22	0.00e+00	1221.00
IUUC-Ani-009411	Aspergillus nidulans	53.33	0.00e+00	825.00
IUUC-Ang-009730	Aspergillus niger	52.25	0.00e+00	1227.00
IUUC-Aor-010172	Aspergillus oryzae	52.33	0.00e+00	1303.00
IUUC-Ate-010493	Aspergillus terreus	50.15	0.00e+00	1170.00
IUUC-Ame-011169	Astyanax mexicanus	34.31	2.00e-96	346.00
IUUC-Bgr-011983	Blumeria graminis	56.14	0.00e+00	1376.00
IUUC-Bta-013378	Bos taurus	35.02	4.00e-122	431.00
IUUC-Bci-013754	Botrytis cinerea	55.63	0.00e+00	1419.00
IUUC-Bol-016139	Brassica oleracea	36.48	4.00e-120	424.00
IUUC-Bra-016816	Brassica rapa	36.48	4.00e-120	424.00
IUUC-Cja-019540	Callithrix jacchus	34.86	7.00e-121	426.00
IUUC-Cfa-020791	Canis familiaris	34.30	3.00e-122	431.00
IUUC-Csa-024273	Chlorocebus sabaeus	34.10	3.00e-120	424.00
IUUC-Cho-024970	Choloepus hoffmanni	32.01	2.00e-109	388.00
IUUC-Cin-025138	Ciona intestinalis	36.51	1.00e-103	368.00
IUUC-Cgl-026747	Colletotrichum gloeosporioides	72.36	0.00e+00	1863.00
IUUC-Cne-026991	Cryptococcus neoformans	36.35	2.00e-155	542.00
IUUC-Dre-028088	Danio rerio	33.73	1.00e-91	329.00
IUUC-Dno-029278	Dasypus novemcinctus	36.30	2.00e-95	342.00
IUUC-Dor-030468	Dipodomys ordii	33.90	3.00e-113	401.00
IUUC-Dse-031349	Dothistroma septosporum	51.37	0.00e+00	1259.00
IUUC-Dme-031899	Drosophila melanogaster	33.29	2.00e-105	375.00
IUUC-Eca-033631	Equus caballus	34.34	4.00e-121	427.00
IUUC-Eeu-035300	Erinaceus europaeus	34.77	2.00e-125	441.00
IUUC-Fca-036139	Felis catus	34.58	2.00e-122	431.00
IUUC-Fal-036635	Ficedula albicollis	34.20	2.00e-140	492.00
IUUC-Fox-037919	Fusarium oxysporum	66.95	0.00e+00	1781.00
IUUC-Fso-038325	Fusarium solani	67.35	0.00e+00	1763.00
IUUC-Gmo-038845	Gadus morhua	34.32	1.00e-76	280.00
IUUC-Ggr-039898	Gaeumannomyces graminis	60.04	0.00e+00	1115.00
IUUC-Gga-040352	Gallus gallus	34.05	8.00e-121	426.00
IUUC-Hsa-045800	Homo sapiens	34.10	3.00e-120	424.00
IUUC-Itr-047998	Ictidomys tridecemlineatus	34.62	8.00e-122	429.00
IUUC-Kpa-049373	Komagataella pastoris	32.23	0.00e+00	634.00
IUUC-Lch-050113	Latimeria chalumnae	34.13	3.00e-120	424.00
IUUC-Lma-053050	Leptosphaeria maculans	51.95	0.00e+00	1233.00
IUUC-Mcc-055887	Macaca mulatta	34.18	8.00e-121	426.00
IUUC-Mor-057213	Magnaporthe oryzae	64.08	0.00e+00	1684.00
IUUC-Mga-059508	Meleagris gallopavo	33.85	3.00e-120	424.00
IUUC-Mvi-060345	Microbotryum violaceum	32.86	1.00e-150	525.00
IUUC-Mmr-061784	Microcebus murinus	34.18	8.00e-122	429.00
IUUC-Mdo-062130	Monodelphis domestica	34.33	5.00e-140	490.00
IUUC-Mmu-064388	Mus musculus	34.55	4.00e-142	497.00
IUUC-Mpu-066129	Mustela putorius furo	34.18	7.00e-122	430.00
IUUC-Mlu-068060	Myotis lucifugus	35.37	7.00e-145	506.00
IUUC-Nfi-068341	Neosartorya fischeri	51.66	0.00e+00	1219.00
IUUC-Ncr-068804	Neurospora crassa	64.36	0.00e+00	1605.00
IUUC-Nle-069904	Nomascus leucogenys	34.22	2.00e-120	424.00
IUUC-Opr-070717	Ochotona princeps	32.31	3.10e-02	32.70
IUUC-Oan-072940	Ornithorhynchus anatinus	33.81	4.00e-120	424.00
IUUC-Ocu-074808	Oryctolagus cuniculus	34.06	8.00e-121	426.00
IUUC-Ola-087195	Oryzias latipes	33.97	4.00e-126	444.00
IUUC-Olu-087596	Ostreococcus lucimarinus	38.34	2.00e-140	491.00
IUUC-Oga-088185	Otolemur garnettii	33.90	2.00e-120	425.00
IUUC-Oar-089378	Ovis aries	34.66	2.00e-122	431.00
IUUC-Ptr-091400	Pan troglodytes	34.10	3.00e-120	424.00
IUUC-Pan-092750	Papio anubis	34.18	9.00e-121	426.00
IUUC-Psi-093597	Pelodiscus sinensis	33.85	1.00e-90	327.00
IUUC-Pma-094193	Petromyzon marinus	29.03	2.00e-03	35.00
IUUC-Pno-094951	Phaeosphaeria nodorum	51.03	0.00e+00	1216.00
IUUC-Pfo-097056	Poecilia formosa	35.47	4.00e-123	434.00
IUUC-Pab-098729	Pongo abelii	35.36	6.00e-139	487.00
IUUC-Ppe-102067	Prunus persica	35.87	6.00e-124	436.00
IUUC-Pva-102886	Pteropus vampyrus	40.98	8.00e-66	243.00
IUUC-Pgr-103316	Puccinia graminis	30.57	8.00e-146	509.00
IUUC-Ptt-103877	Puccinia triticina	29.01	3.00e-125	441.00
IUUC-Pte-104049	Pyrenophora teres	52.80	0.00e+00	1257.00
IUUC-Pyt-104735	Pyrenophora triticirepentis	53.10	0.00e+00	1241.00
IUUC-Rno-106032	Rattus norvegicus	34.33	4.00e-142	497.00
IUUC-Sce-106450	Saccharomyces cerevisiae	33.03	0.00e+00	664.00
IUUC-Sha-106606	Sarcophilus harrisii	34.29	2.00e-127	448.00
IUUC-Sja-107784	Schizosaccharomyces japonicus	36.32	0.00e+00	751.00
IUUC-Spo-108229	Schizosaccharomyces pombe	35.64	0.00e+00	739.00
IUUC-Smo-109377	Selaginella moellendorffii	38.39	6.00e-134	469.00
IUUC-Sre-115121	Sporisorium reilianum	38.11	7.00e-147	513.00
IUUC-Ssc-116414	Sus scrofa	23.91	1.30e-02	31.60
IUUC-Tgu-117294	Taeniopygia guttata	32.94	2.00e-119	421.00
IUUC-Tru-118378	Takifugu rubripes	35.44	3.00e-138	484.00
IUUC-Tsy-119563	Tarsius syrichta	33.81	3.00e-119	421.00
IUUC-Tni-120568	Tetraodon nigroviridis	34.97	2.00e-120	425.00
IUUC-Tca-121301	Theobroma cacao	36.32	6.00e-121	426.00
IUUC-Tre-122120	Trichoderma reesei	66.28	0.00e+00	1729.00
IUUC-Tvi-122632	Trichoderma virens	66.69	0.00e+00	1716.00
IUUC-Tme-127179	Tuber melanosporum	42.30	0.00e+00	948.00
IUUC-Tbe-127844	Tupaia belangeri	33.21	2.00e-111	395.00
IUUC-Ttr-128592	Tursiops truncatus	34.30	1.00e-121	429.00
IUUC-Uma-129440	Ustilago maydis	31.87	2.00e-157	548.00
IUUC-Vpa-130460	Vicugna pacos	32.89	1.00e-118	419.00
IUUC-Vvi-131000	Vitis vinifera	35.30	2.00e-122	431.00
IUUC-Xtr-132421	Xenopus tropicalis	35.31	9.00e-122	429.00
IUUC-Xma-134305	Xiphophorus maculatus	34.95	3.00e-120	424.00
IUUC-Yli-134558	Yarrowia lipolytica	40.51	0.00e+00	924.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence