iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099566

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_775145; POPTR_0014s16360g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s16360	POPTR_0014s16360.1	POPTR_0014s16360.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	61.81	6.00e-35	143.00	IUUC-Ath-007127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

RPKFCINDHV DILLEILKRL DGRSLCVSAC VCRLWCTIAR NDSLWEHLCF RHVSPPPSSG 60
VRPVVVALGG YKRLYMVCVR PVLSRLGRLR LAGDSDRVRR VWTRDEVQLS LSLFCVDYYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACCCAAGT TCTGCATCAA TGACCACGTA GACATTCTTT TGGAAATCCT GAAACGACTC 60
GACGGCCGCT CTCTCTGTGT TTCTGCCTGT GTCTGCCGTC TCTGGTGCAC CATTGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0014s16360g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002846	Amborella trichopoda	38.93	1.00e-17	82.00
IUUC-Apl-003195	Anas platyrhynchos	43.90	6.00e-04	36.20
IUUC-Aca-004788	Anolis carolinensis	31.43	2.00e-04	37.70
IUUC-Aly-005539	Arabidopsis lyrata	63.89	2.00e-42	163.00
IUUC-Ath-007127	Arabidopsis thaliana	61.81	9.00e-41	158.00
IUUC-Bdi-014290	Brachypodium distachyon	58.62	1.00e-16	78.60
IUUC-Bol-015233	Brassica oleracea	60.42	2.00e-39	153.00
IUUC-Bra-017984	Brassica rapa	61.11	7.00e-41	158.00
IUUC-Cja-019552	Callithrix jacchus	35.00	1.00e-05	41.60
IUUC-Cin-025781	Ciona intestinalis	38.30	2.00e-05	43.90
IUUC-Dor-030194	Dipodomys ordii	30.56	2.00e-04	38.10
IUUC-Gma-043632	Glycine max	73.47	6.00e-50	189.00
IUUC-Lpe-050816	Leersia perrieri	50.00	6.00e-07	46.20
IUUC-Loc-052597	Lepisosteus oculatus	46.34	4.00e-05	40.00
IUUC-Laf-054453	Loxodonta africana	32.56	3.00e-05	40.40
IUUC-Mtr-057946	Medicago truncatula	68.71	3.00e-40	156.00
IUUC-Mmu-063222	Mus musculus	30.56	6.00e-04	36.20
IUUC-Nle-069650	Nomascus leucogenys	31.94	3.00e-04	37.40
IUUC-Opr-070720	Ochotona princeps	30.56	8.00e-05	38.90
IUUC-Oan-073265	Ornithorhynchus anatinus	37.50	1.00e-04	38.10
IUUC-Ogl-077474	Oryza glaberrima	47.95	3.00e-09	53.90
IUUC-Ogu-079029	Oryza glumaepatula	47.95	3.00e-09	53.90
IUUC-Oin-080121	Oryza indica	47.95	3.00e-09	53.90
IUUC-Ome-081968	Oryza meridionalis	63.27	2.00e-06	43.10
IUUC-Oni-082552	Oryza nivara	47.95	3.00e-09	53.90
IUUC-Opu-083746	Oryza punctata	53.42	3.00e-10	57.40
IUUC-Oru-084658	Oryza rufipogon	47.95	3.00e-09	53.90
IUUC-Osa-086295	Oryza sativa	47.95	3.00e-09	53.90
IUUC-Olu-087621	Ostreococcus lucimarinus	35.71	1.70e-02	34.70
IUUC-Psi-093939	Pelodiscus sinensis	41.46	1.00e-04	38.50
IUUC-Ppa-095448	Physcomitrella patens	45.71	1.00e-04	40.00
IUUC-Pab-097968	Pongo abelii	33.33	2.00e-04	37.70
IUUC-Pca-100414	Procavia capensis	35.21	1.00e-04	37.70
IUUC-Ppe-102106	Prunus persica	81.08	4.00e-45	172.00
IUUC-Pva-102518	Pteropus vampyrus	33.80	2.00e-05	41.20
IUUC-Sly-111364	Solanum lycopersicum	65.45	3.00e-45	173.00
IUUC-Stu-112502	Solanum tuberosum	66.67	2.00e-45	174.00
IUUC-Sbi-114231	Sorghum bicolor	65.31	1.00e-06	45.40
IUUC-Tae-124891	Triticum aestivum	60.38	2.00e-15	74.30
IUUC-Tur-126713	Triticum urartu	40.00	9.00e-03	33.10
IUUC-Tbe-128104	Tupaia belangeri	40.48	1.00e-03	35.40
IUUC-Vvi-130926	Vitis vinifera	72.37	2.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence