iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014849

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100834292; BRADI_2g60817

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G60817	BRADI2G60817.1	BRADI2G60817.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-32	108.3	252	286
UBD/Beta-Prp	9.00e-59	199.6	171	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H +sv++l+f  +d  ++s+sdD t+kvWD+ ++ 
   Q: 252  HGESVRDLSFcrTDLKFCSCSDDTTVKVWDFARCQ 286
           999********877889*************87665 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
            i+cv ++p ++ l+tgs++g  ++w+ ++ ++   l+ h+++v+++ +s++++++vtg + ++ik w  + +   +  ++h +sv++lsf++++
   Q: 171  SINCVVWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAVRSMIWSHNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHGESVRDLSFCRTD 265
           588999999999***************9999999999***************9999999999******99999999999999999********99 PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
            k+ s s+d t++vwd    q+ +  l+gh   v +v +hp+++llvsG++D  v+lWd k+g+ lr + g h++ v+++++++ng+ ++++s+d
   Q: 266  LKFCSCSDDTTVKVWDFARCQEER-SLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHG-HKNIVQCVKWNQNGNWVLTASKD 358
           999************999999999.99****99********99**************************99.*********************** PP
   S: 202  gtvklwdlqt 211
           + +kl+d+++
   Q: 359  QIIKLYDIRS 368
           ******9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MMHQHQHQHQ PPPPPPPQHP PPQAAGGGGG GGGGEFYRGP LQPPMRQLSA ASSTNLPPEY 60
AAHSGPPQQH HHHQQQPPPQ QQQQPFDAYG DNFGAKRMRK PVQRRTVDYT SSLVRYAQAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCATC AGCATCAGCA CCAGCACCAG CCGCCGCCGC CTCCCCCGCC GCAGCACCCG 60
CCGCCGCAGG CCGCCGGCGG CGGCGGCGGC GGCGGCGGCG GGGAGTTCTA CCGCGGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage

KEGG

bdi:100834292

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	89.14	0.00e+00	989.00
IUUC-Aml-001363	Ailuropoda melanoleuca	52.22	4.00e-132	465.00
IUUC-Atr-003030	Amborella trichopoda	74.44	0.00e+00	692.00
IUUC-Apl-003409	Anas platyrhynchos	52.10	5.00e-130	458.00
IUUC-Aca-004694	Anolis carolinensis	52.11	7.00e-131	461.00
IUUC-Aly-006063	Arabidopsis lyrata	75.34	0.00e+00	693.00
IUUC-Ath-006583	Arabidopsis thaliana	68.97	0.00e+00	696.00
IUUC-Ago-007805	Ashbya gossypii	45.45	2.00e-87	315.00
IUUC-Acl-008075	Aspergillus clavatus	40.94	5.00e-93	334.00
IUUC-Afl-008582	Aspergillus flavus	42.16	3.00e-90	325.00
IUUC-Afu-008817	Aspergillus fumigatus	39.35	2.00e-79	288.00
IUUC-Ani-009391	Aspergillus nidulans	38.77	2.00e-82	299.00
IUUC-Ang-009750	Aspergillus niger	43.91	1.00e-76	278.00
IUUC-Aor-010085	Aspergillus oryzae	41.44	8.00e-93	333.00
IUUC-Ate-010397	Aspergillus terreus	41.18	4.00e-93	334.00
IUUC-Ame-010741	Astyanax mexicanus	56.56	4.00e-81	295.00
IUUC-Bgr-012169	Blumeria graminis	45.33	2.00e-98	352.00
IUUC-Bta-013265	Bos taurus	52.35	5.00e-132	465.00
IUUC-Bci-013762	Botrytis cinerea	43.41	2.00e-98	352.00
IUUC-Bol-015325	Brassica oleracea	71.28	0.00e+00	695.00
IUUC-Bra-017187	Brassica rapa	71.28	0.00e+00	692.00
IUUC-Cel-018378	Caenorhabditis elegans	44.55	9.00e-112	397.00
IUUC-Cja-019547	Callithrix jacchus	52.35	4.00e-132	465.00
IUUC-Cfa-020031	Canis familiaris	52.35	4.00e-132	465.00
IUUC-Cpo-021554	Cavia porcellus	51.31	4.00e-127	448.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	42.47	1.00e-74	273.00
IUUC-Csa-023146	Chlorocebus sabaeus	52.11	1.00e-131	464.00
IUUC-Cho-024679	Choloepus hoffmanni	51.56	2.00e-118	420.00
IUUC-Cin-025415	Ciona intestinalis	54.74	3.00e-123	435.00
IUUC-Csv-026003	Ciona savignyi	53.39	1.00e-118	419.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	44.35	1.00e-96	346.00
IUUC-Cne-026983	Cryptococcus neoformans	43.29	2.00e-90	325.00
IUUC-Cme-027147	Cyanidioschyzon merolae	51.57	7.00e-115	406.00
IUUC-Dre-028545	Danio rerio	52.46	7.00e-133	468.00
IUUC-Dno-029677	Dasypus novemcinctus	52.35	3.00e-132	465.00
IUUC-Dse-031371	Dothistroma septosporum	44.41	4.00e-93	334.00
IUUC-Dme-031663	Drosophila melanogaster	51.80	1.00e-132	466.00
IUUC-Ete-032511	Echinops telfairi	46.48	8.00e-111	394.00
IUUC-Eca-034152	Equus caballus	52.35	7.00e-132	464.00
IUUC-Eeu-034560	Erinaceus europaeus	43.72	8.00e-46	178.00
IUUC-Fca-035820	Felis catus	52.35	7.00e-132	464.00
IUUC-Fox-037958	Fusarium oxysporum	42.09	6.00e-96	343.00
IUUC-Fso-038162	Fusarium solani	44.78	2.00e-95	342.00
IUUC-Gmo-039708	Gadus morhua	52.34	5.00e-131	461.00
IUUC-Ggr-040031	Gaeumannomyces graminis	41.26	1.00e-88	319.00
IUUC-Gga-040963	Gallus gallus	52.35	1.00e-131	463.00
IUUC-Gac-041541	Gasterosteus aculeatus	51.75	3.00e-129	455.00
IUUC-Gma-044352	Glycine max	74.80	0.00e+00	732.00
IUUC-Ggo-045564	Gorilla gorilla	52.35	5.00e-132	465.00
IUUC-Hsa-045833	Homo sapiens	52.35	5.00e-132	465.00
IUUC-Hvu-047848	Hordeum vulgare	92.11	0.00e+00	733.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	52.35	6.00e-132	464.00
IUUC-Kpa-049308	Komagataella pastoris	41.16	4.00e-87	314.00
IUUC-Lch-050525	Latimeria chalumnae	52.46	3.00e-131	462.00
IUUC-Lpe-051364	Leersia perrieri	82.76	0.00e+00	811.00
IUUC-Loc-052696	Lepisosteus oculatus	52.35	3.00e-132	466.00
IUUC-Lma-052951	Leptosphaeria maculans	45.65	3.00e-98	351.00
IUUC-Laf-053653	Loxodonta africana	52.35	1.00e-131	464.00
IUUC-Mcc-055797	Macaca mulatta	52.35	4.00e-132	465.00
IUUC-Meu-056331	Macropus eugenii	53.58	1.00e-101	364.00
IUUC-Mor-057168	Magnaporthe oryzae	40.81	1.00e-90	327.00
IUUC-Mpo-057510	Magnaporthe poae	43.75	2.00e-62	231.00
IUUC-Mtr-058032	Medicago truncatula	75.49	0.00e+00	709.00
IUUC-Mla-058852	Melampsora laricipopulina	50.67	1.00e-111	396.00
IUUC-Mga-059311	Meleagris gallopavo	52.35	1.00e-131	464.00
IUUC-Mvi-060544	Microbotryum violaceum	51.21	8.00e-114	403.00
IUUC-Mmr-061143	Microcebus murinus	52.35	5.00e-132	465.00
IUUC-Mdo-061977	Monodelphis domestica	52.35	1.00e-131	463.00
IUUC-Mmu-063922	Mus musculus	52.35	6.00e-132	464.00
IUUC-Mac-064961	Musa acuminata	81.66	0.00e+00	765.00
IUUC-Mpu-066079	Mustela putorius furo	53.66	4.00e-115	409.00
IUUC-Mlu-067247	Myotis lucifugus	52.22	5.00e-132	465.00
IUUC-Nfi-068255	Neosartorya fischeri	41.60	4.00e-87	314.00
IUUC-Ncr-068909	Neurospora crassa	43.04	5.00e-97	348.00
IUUC-Nle-068994	Nomascus leucogenys	52.35	5.00e-132	465.00
IUUC-Opr-071079	Ochotona princeps	52.74	3.00e-132	466.00
IUUC-Ont-071971	Oreochromis niloticus	52.35	7.00e-131	461.00
IUUC-Oan-073135	Ornithorhynchus anatinus	52.06	3.00e-117	416.00
IUUC-Ocu-073982	Oryctolagus cuniculus	52.35	1.00e-131	463.00
IUUC-Oba-075297	Oryza barthii	79.10	0.00e+00	878.00
IUUC-Obr-076641	Oryza brachyantha	92.09	0.00e+00	824.00
IUUC-Ogl-077539	Oryza glaberrima	84.42	0.00e+00	675.00
IUUC-Ogu-078807	Oryza glumaepatula	79.10	0.00e+00	890.00
IUUC-Oin-079229	Oryza indica	82.84	0.00e+00	927.00
IUUC-Olo-080371	Oryza longistaminata	81.27	0.00e+00	826.00
IUUC-Ome-081149	Oryza meridionalis	79.94	0.00e+00	877.00
IUUC-Oni-082970	Oryza nivara	79.25	0.00e+00	879.00
IUUC-Opu-083415	Oryza punctata	83.71	0.00e+00	813.00
IUUC-Oru-085236	Oryza rufipogon	81.19	0.00e+00	910.00
IUUC-Ola-087421	Oryzias latipes	53.05	2.00e-133	468.00
IUUC-Olu-087821	Ostreococcus lucimarinus	53.57	2.00e-118	417.00
IUUC-Oga-088132	Otolemur garnettii	52.35	5.00e-132	465.00
IUUC-Oar-089513	Ovis aries	52.35	5.00e-132	465.00
IUUC-Ptr-090717	Pan troglodytes	52.35	5.00e-132	465.00
IUUC-Pan-092108	Papio anubis	52.35	5.00e-132	465.00
IUUC-Psi-093892	Pelodiscus sinensis	52.35	2.00e-131	463.00
IUUC-Pma-094561	Petromyzon marinus	57.22	5.00e-132	465.00
IUUC-Pno-094943	Phaeosphaeria nodorum	44.30	2.00e-98	352.00
IUUC-Ppa-095359	Physcomitrella patens	73.56	0.00e+00	644.00
IUUC-Pfo-096516	Poecilia formosa	52.98	4.00e-130	458.00
IUUC-Pab-097759	Pongo abelii	52.35	5.00e-132	465.00
IUUC-Pop-099553	Populus trichocarpa	73.04	0.00e+00	742.00
IUUC-Ppe-101957	Prunus persica	72.62	0.00e+00	733.00
IUUC-Pva-102918	Pteropus vampyrus	52.35	1.00e-131	463.00
IUUC-Pgr-103594	Puccinia graminis	50.81	6.00e-113	400.00
IUUC-Ptt-103879	Puccinia triticina	45.43	2.00e-95	342.00
IUUC-Pte-104419	Pyrenophora teres	43.60	8.00e-100	357.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	45.88	3.00e-98	351.00
IUUC-Rno-105838	Rattus norvegicus	52.35	5.00e-132	465.00
IUUC-Sce-106331	Saccharomyces cerevisiae	39.95	5.00e-80	290.00
IUUC-Sha-107435	Sarcophilus harrisii	52.10	3.00e-130	459.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	41.94	3.00e-96	344.00
IUUC-Spo-108163	Schizosaccharomyces pombe	42.68	2.00e-97	348.00
IUUC-Smo-109602	Selaginella moellendorffii	70.07	0.00e+00	638.00
IUUC-Sit-109729	Setaria italica	84.75	0.00e+00	933.00
IUUC-Sly-111679	Solanum lycopersicum	76.73	0.00e+00	722.00
IUUC-Sar-113157	Sorex araneus	52.35	1.00e-131	464.00
IUUC-Sbi-114853	Sorghum bicolor	78.52	0.00e+00	933.00
IUUC-Sre-115085	Sporisorium reilianum	44.20	2.00e-93	336.00
IUUC-Ssc-116286	Sus scrofa	52.57	1.00e-130	460.00
IUUC-Tgu-117219	Taeniopygia guttata	52.35	2.00e-131	462.00
IUUC-Tru-117550	Takifugu rubripes	52.11	5.00e-132	463.00
IUUC-Tsy-119294	Tarsius syrichta	52.35	2.00e-132	466.00
IUUC-Tni-120561	Tetraodon nigroviridis	52.13	3.00e-132	465.00
IUUC-Tca-121347	Theobroma cacao	79.64	0.00e+00	753.00
IUUC-Tre-122018	Trichoderma reesei	42.93	4.00e-99	354.00
IUUC-Tvi-122413	Trichoderma virens	42.93	5.00e-98	351.00
IUUC-Tae-123191	Triticum aestivum	91.27	0.00e+00	1050.00
IUUC-Tme-127077	Tuber melanosporum	46.56	6.00e-101	360.00
IUUC-Tbe-127744	Tupaia belangeri	37.82	1.00e-66	248.00
IUUC-Ttr-128777	Tursiops truncatus	45.43	2.00e-103	369.00
IUUC-Uma-129568	Ustilago maydis	41.02	7.00e-92	330.00
IUUC-Vda-129834	Verticillium dahliae	40.05	8.00e-91	327.00
IUUC-Vpa-130563	Vicugna pacos	52.53	6.00e-28	118.00
IUUC-Vvi-131360	Vitis vinifera	76.02	0.00e+00	756.00
IUUC-Xtr-132630	Xenopus tropicalis	53.11	2.00e-133	470.00
IUUC-Xma-133665	Xiphophorus maculatus	53.35	9.00e-132	464.00
IUUC-Yli-134556	Yarrowia lipolytica	39.91	3.00e-81	295.00
IUUC-Zma-135787	Zea mays	84.94	0.00e+00	840.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence