iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111031

Ensembl Protein ID

Solyc03g005460.2.1

UniProt Accession

K4BDX0; K4BDX0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g005460.2	Solyc03g005460.2.1	Solyc03g005460.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-08	34.6	887	927

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle+ +d p+++pC H ++++Cl   w      +  + +CP+Cr
   Q: 887  CPICLESADD-PVLTPCAHRMCRECLlSSW-----RTPASGLCPICR 927
           **********.999***********99999.....6788889****8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEMEANVEED AKNIKMIRSV IGSEIPENEI LEALSQKNNN PEAAINHLLD SSPPLIVQKT 60
VTSTGVRISA PIKQENGEES LGCNTISGLK VKEETDLGVN GKRERKVFDV CGAKGSAGNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAATGG AAGCAAATGT TGAAGAGGAT GCGAAGAATA TTAAGATGAT TCGTTCAGTA 60
ATCGGTTCTG AAATTCCAGA AAATGAAATT CTGGAAGCCC TTTCACAGAA AAACAACAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR015940--UBA
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50030--UBA
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

sly:101243672

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	62.31	0.00e+00	1139.00
IUUC-Atr-003058	Amborella trichopoda	57.38	0.00e+00	1204.00
IUUC-Aly-005600	Arabidopsis lyrata	71.33	0.00e+00	1348.00
IUUC-Ath-007079	Arabidopsis thaliana	64.23	0.00e+00	1340.00
IUUC-Ago-007997	Ashbya gossypii	29.94	6.00e-103	368.00
IUUC-Ame-011743	Astyanax mexicanus	38.67	4.00e-101	362.00
IUUC-Bgr-012147	Blumeria graminis	33.95	4.00e-136	478.00
IUUC-Bdi-014496	Brachypodium distachyon	54.39	0.00e+00	1132.00
IUUC-Bol-015995	Brassica oleracea	70.69	0.00e+00	1334.00
IUUC-Bra-017004	Brassica rapa	68.57	0.00e+00	1273.00
IUUC-Cho-024891	Choloepus hoffmanni	36.41	7.00e-65	241.00
IUUC-Csv-026168	Ciona savignyi	28.59	2.00e-61	229.00
IUUC-Cne-026886	Cryptococcus neoformans	33.47	6.00e-140	491.00
IUUC-Cme-027110	Cyanidioschyzon merolae	36.26	2.00e-131	462.00
IUUC-Dre-027867	Danio rerio	39.23	3.00e-112	399.00
IUUC-Dse-031471	Dothistroma septosporum	32.04	2.00e-134	472.00
IUUC-Dme-031815	Drosophila melanogaster	30.11	4.00e-67	249.00
IUUC-Ete-032421	Echinops telfairi	33.15	3.00e-78	286.00
IUUC-Gma-042857	Glycine max	61.35	0.00e+00	1182.00
IUUC-Ggo-045628	Gorilla gorilla	37.10	3.00e-108	385.00
IUUC-Hsa-045930	Homo sapiens	37.10	6.00e-108	384.00
IUUC-Hvu-047747	Hordeum vulgare	62.70	0.00e+00	1147.00
IUUC-Kpa-049087	Komagataella pastoris	32.48	2.00e-107	383.00
IUUC-Lch-050617	Latimeria chalumnae	40.61	1.00e-114	407.00
IUUC-Lpe-051123	Leersia perrieri	55.19	0.00e+00	1201.00
IUUC-Mtr-058194	Medicago truncatula	60.96	0.00e+00	1137.00
IUUC-Mac-064548	Musa acuminata	60.79	0.00e+00	1128.00
IUUC-Ncr-068844	Neurospora crassa	33.26	4.00e-128	452.00
IUUC-Opr-070388	Ochotona princeps	41.90	2.00e-49	190.00
IUUC-Oba-075316	Oryza barthii	62.04	0.00e+00	1156.00
IUUC-Obr-076834	Oryza brachyantha	55.81	0.00e+00	1199.00
IUUC-Ogl-077508	Oryza glaberrima	63.90	0.00e+00	1173.00
IUUC-Ogu-078083	Oryza glumaepatula	62.14	0.00e+00	1172.00
IUUC-Oin-079893	Oryza indica	64.12	0.00e+00	1189.00
IUUC-Olo-080615	Oryza longistaminata	64.34	0.00e+00	1195.00
IUUC-Oni-082773	Oryza nivara	62.35	0.00e+00	1175.00
IUUC-Opu-083675	Oryza punctata	55.29	0.00e+00	1205.00
IUUC-Oru-084543	Oryza rufipogon	62.14	0.00e+00	1170.00
IUUC-Ola-086830	Oryzias latipes	36.95	2.00e-99	356.00
IUUC-Ptr-091418	Pan troglodytes	37.10	7.00e-108	384.00
IUUC-Pan-091844	Papio anubis	29.97	3.00e-70	259.00
IUUC-Pab-098010	Pongo abelii	37.10	9.00e-108	384.00
IUUC-Pop-099537	Populus trichocarpa	67.40	0.00e+00	1316.00
IUUC-Ppe-102107	Prunus persica	68.35	0.00e+00	1343.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	36.29	1.00e-126	447.00
IUUC-Sce-106396	Saccharomyces cerevisiae	33.56	2.00e-104	373.00
IUUC-Sit-110795	Setaria italica	63.38	0.00e+00	1095.00
IUUC-Stu-112600	Solanum tuberosum	94.90	0.00e+00	2157.00
IUUC-Sbi-114616	Sorghum bicolor	61.05	0.00e+00	1098.00
IUUC-Tca-121146	Theobroma cacao	60.92	0.00e+00	1370.00
IUUC-Tae-124792	Triticum aestivum	62.64	0.00e+00	1144.00
IUUC-Tur-125999	Triticum urartu	58.18	0.00e+00	1064.00
IUUC-Uma-129629	Ustilago maydis	31.08	3.00e-122	432.00
IUUC-Vvi-131508	Vitis vinifera	74.76	0.00e+00	1429.00
IUUC-Xtr-132730	Xenopus tropicalis	40.36	9.00e-118	417.00
IUUC-Yli-134588	Yarrowia lipolytica	34.03	3.00e-102	365.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence