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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006632
UUCD1 version UUC-ArT-00254
Ensembl Protein ID AT5G45760.1
UniProt Accession F4KEM4; F4KEM4_ARATH
Genbank Protein ID AED95293.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002688
Gene Name MRA19.19; MRA19_19; At5g45760
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G45760 AT5G45760.1 AT5G45760.1
AT5G45760 AT5G45760.2 AT5G45760.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.50e-15 55.8 272 306
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDl 30
           gH++ v+c+af   ++  ++l+sG++D+t+k+WD 
   Q: 272  GHNSAVSCVAFslfQEkgRFLISGGNDKTVKIWDC 306
           8*************444599**************5 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MATAMEEPRK LRGHKSTATC CIASRDRPGI VLTSGEDGCI CWFDLRCKDV QFIIDVGTEP 60
VSSLCFKTGN ENILYASCGN EIKSFDVHTL SATSWKPLES YNYNKDEVNQ VVCNGRSSFL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006632|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTAGTTTTGG TTTGTTTCGG TTAGCCTTTT TTAGCTCAAT TTAGAGCTTG AAACTGAGCA 60
ATCGCCGGAG AAACTCTCAC TCACAGTTAT GGCTACGGCA ATGGAAGAGC CAAGGAAGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006632|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
KEGG ath:AT5G45760
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000124 Aegilops tauschii 52.70 3.00e-93 335.00
IUUC-Aml-001203 Ailuropoda melanoleuca 26.92 5.00e-28 117.00
IUUC-Atr-002680 Amborella trichopoda 55.10 2.00e-93 335.00
IUUC-Apl-003656 Anas platyrhynchos 27.36 2.00e-22 99.00
IUUC-Aca-004987 Anolis carolinensis 28.87 2.00e-26 112.00
IUUC-Aly-006254 Arabidopsis lyrata 91.39 9.00e-180 621.00
IUUC-Ame-011032 Astyanax mexicanus 27.09 2.00e-25 109.00
IUUC-Bta-012588 Bos taurus 27.95 1.00e-29 122.00
IUUC-Bdi-014532 Brachypodium distachyon 56.00 2.00e-105 375.00
IUUC-Bol-015542 Brassica oleracea 82.72 2.00e-149 521.00
IUUC-Bra-017046 Brassica rapa 87.21 9.00e-166 576.00
IUUC-Cja-019365 Callithrix jacchus 27.53 1.00e-28 119.00
IUUC-Cfa-021090 Canis familiaris 26.61 2.00e-27 115.00
IUUC-Cpo-021517 Cavia porcellus 28.57 5.00e-25 107.00
IUUC-Csa-023041 Chlorocebus sabaeus 26.94 5.00e-28 117.00
IUUC-Cho-024801 Choloepus hoffmanni 26.79 7.00e-28 117.00
IUUC-Dre-028437 Danio rerio 29.43 8.00e-19 87.00
IUUC-Dno-029267 Dasypus novemcinctus 27.13 4.00e-26 111.00
IUUC-Ete-032726 Echinops telfairi 22.07 7.00e-09 53.90
IUUC-Eca-033621 Equus caballus 26.74 8.00e-27 113.00
IUUC-Eeu-034461 Erinaceus europaeus 30.92 6.00e-29 120.00
IUUC-Fca-036410 Felis catus 27.18 4.00e-27 114.00
IUUC-Fal-036676 Ficedula albicollis 26.44 3.00e-26 112.00
IUUC-Gac-041905 Gasterosteus aculeatus 27.70 6.00e-28 117.00
IUUC-Gma-043066 Glycine max 58.82 8.00e-115 406.00
IUUC-Ggo-044881 Gorilla gorilla 27.20 8.00e-28 117.00
IUUC-Hsa-046836 Homo sapiens 27.72 9.00e-29 120.00
IUUC-Hvu-047651 Hordeum vulgare 55.94 1.00e-108 385.00
IUUC-Itr-048206 Ictidomys tridecemlineatus 27.99 8.00e-29 120.00
IUUC-Lch-050406 Latimeria chalumnae 28.67 3.00e-19 88.60
IUUC-Lpe-051023 Leersia perrieri 46.97 2.00e-88 318.00
IUUC-Loc-052878 Lepisosteus oculatus 27.63 1.00e-27 116.00
IUUC-Laf-053547 Loxodonta africana 27.32 1.00e-28 119.00
IUUC-Mcc-054646 Macaca mulatta 27.11 3.00e-27 115.00
IUUC-Meu-056381 Macropus eugenii 27.69 5.00e-26 110.00
IUUC-Mtr-058656 Medicago truncatula 56.57 7.00e-116 409.00
IUUC-Mmr-061601 Microcebus murinus 26.41 2.00e-28 119.00
IUUC-Mdo-062305 Monodelphis domestica 26.15 1.00e-25 109.00
IUUC-Mmu-063213 Mus musculus 26.67 4.00e-27 114.00
IUUC-Mac-064940 Musa acuminata 56.54 1.00e-128 452.00
IUUC-Mpu-066629 Mustela putorius furo 26.04 3.00e-28 118.00
IUUC-Nle-069860 Nomascus leucogenys 27.74 4.00e-28 117.00
IUUC-Opr-071180 Ochotona princeps 26.50 3.00e-20 91.70
IUUC-Ont-071912 Oreochromis niloticus 28.85 1.00e-26 113.00
IUUC-Ocu-074874 Oryctolagus cuniculus 26.92 3.00e-28 118.00
IUUC-Oba-075815 Oryza barthii 45.14 8.00e-83 299.00
IUUC-Obr-076835 Oryza brachyantha 53.40 2.00e-80 291.00
IUUC-Ogu-077977 Oryza glumaepatula 45.45 1.00e-81 295.00
IUUC-Oin-079206 Oryza indica 52.37 2.00e-106 377.00
IUUC-Olo-080621 Oryza longistaminata 46.42 4.00e-85 307.00
IUUC-Ome-081261 Oryza meridionalis 45.00 2.00e-81 295.00
IUUC-Oni-082280 Oryza nivara 49.63 1.00e-33 135.00
IUUC-Opu-083256 Oryza punctata 45.41 5.00e-83 300.00
IUUC-Oru-084531 Oryza rufipogon 41.40 4.00e-71 260.00
IUUC-Osa-085892 Oryza sativa 52.37 2.00e-106 377.00
IUUC-Ola-086701 Oryzias latipes 26.56 2.00e-23 102.00
IUUC-Olu-087593 Ostreococcus lucimarinus 23.71 2.00e-07 49.70
IUUC-Oga-088152 Otolemur garnettii 28.02 2.00e-28 119.00
IUUC-Oar-089681 Ovis aries 27.18 1.00e-27 116.00
IUUC-Ptr-091142 Pan troglodytes 27.46 5.00e-28 117.00
IUUC-Pan-092435 Papio anubis 28.24 6.00e-26 110.00
IUUC-Psi-093255 Pelodiscus sinensis 27.80 3.00e-24 105.00
IUUC-Ppa-095829 Physcomitrella patens 37.60 3.00e-63 234.00
IUUC-Pfo-097339 Poecilia formosa 26.97 1.00e-24 106.00
IUUC-Pab-098274 Pongo abelii 27.84 6.00e-27 114.00
IUUC-Pop-099705 Populus trichocarpa 61.54 2.00e-128 451.00
IUUC-Pca-100451 Procavia capensis 28.09 2.00e-28 118.00
IUUC-Ppe-101220 Prunus persica 64.95 7.00e-142 496.00
IUUC-Pva-102385 Pteropus vampyrus 26.04 7.00e-28 117.00
IUUC-Rno-105765 Rattus norvegicus 27.44 4.00e-28 118.00
IUUC-Sha-106533 Sarcophilus harrisii 30.39 5.00e-27 114.00
IUUC-Smo-109248 Selaginella moellendorffii 38.31 2.00e-67 248.00
IUUC-Sit-110297 Setaria italica 54.58 6.00e-76 276.00
IUUC-Sly-111617 Solanum lycopersicum 58.67 2.00e-122 431.00
IUUC-Stu-112531 Solanum tuberosum 58.93 8.00e-124 436.00
IUUC-Sar-113647 Sorex araneus 26.74 3.00e-26 111.00
IUUC-Sbi-114621 Sorghum bicolor 55.61 5.00e-116 410.00
IUUC-Tgu-116482 Taeniopygia guttata 25.92 6.00e-21 94.40
IUUC-Tru-118622 Takifugu rubripes 24.30 3.00e-22 98.60
IUUC-Tsy-119474 Tarsius syrichta 25.83 1.00e-25 110.00
IUUC-Tni-120250 Tetraodon nigroviridis 22.65 1.00e-13 70.10
IUUC-Tca-121583 Theobroma cacao 63.56 1.00e-143 501.00
IUUC-Tae-123764 Triticum aestivum 55.47 3.00e-109 387.00
IUUC-Tur-126076 Triticum urartu 47.07 4.00e-84 304.00
IUUC-Tbe-127545 Tupaia belangeri 27.84 8.00e-29 120.00
IUUC-Ttr-128497 Tursiops truncatus 26.67 3.00e-27 115.00
IUUC-Vpa-130772 Vicugna pacos 25.71 1.00e-25 109.00
IUUC-Vvi-131632 Vitis vinifera 64.72 6.00e-146 509.00
IUUC-Xma-133432 Xiphophorus maculatus 27.96 2.00e-25 109.00
Created Date 25-Jun-2017

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