iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069860

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01122364

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000001568.2	ENSNLET00000001980.2	ENSNLEP00000001872.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	88.6	239	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt +v+ ++f ++  ll++G++Dg+i++WD  +gv  
   Q: 239  GHTLGVSQVCFlPEsYLLLTGGNDGKIMLWDANSGVEK 276
           8999********88899**************9988876 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAVKWMGGHS SPVLCLNASK EGLLASGAEG GDLTAWGEDG TPLGHTRFQG ADDVTSVLFS 60
PSCPTKLYAS HGETISVLDV RSLKDSLDHF HVNEEEINCL SLNQTENLLA SADDSGAIKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCTCCGGG ACCATTATGG CAGTCAAGTG GATGGGTGGG CATTCTTCTC CTGTCCTCTG 60
CCTGAATGCA AGTAAAGAAG GGCTGCTGGC TTCTGGAGCA GAGGGTGGAG ATCTCACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	28.22	5.00e-14	72.40
IUUC-Aml-001203	Ailuropoda melanoleuca	91.90	0.00e+00	649.00
IUUC-Atr-002680	Amborella trichopoda	25.45	3.00e-22	99.40
IUUC-Apl-003656	Anas platyrhynchos	58.26	2.00e-105	375.00
IUUC-Aca-004987	Anolis carolinensis	63.23	2.00e-124	438.00
IUUC-Aly-006254	Arabidopsis lyrata	30.49	3.00e-28	119.00
IUUC-Ath-006632	Arabidopsis thaliana	29.32	2.00e-26	113.00
IUUC-Ame-011032	Astyanax mexicanus	47.01	1.00e-91	329.00
IUUC-Bta-012588	Bos taurus	81.56	1.00e-162	565.00
IUUC-Bdi-014532	Brachypodium distachyon	26.45	6.00e-26	111.00
IUUC-Bol-015542	Brassica oleracea	27.78	1.00e-20	94.70
IUUC-Bra-017046	Brassica rapa	30.46	7.00e-28	119.00
IUUC-Cja-019365	Callithrix jacchus	95.53	0.00e+00	708.00
IUUC-Cfa-021090	Canis familiaris	89.94	0.00e+00	642.00
IUUC-Cpo-021517	Cavia porcellus	83.29	0.00e+00	628.00
IUUC-Csa-023041	Chlorocebus sabaeus	98.04	0.00e+00	687.00
IUUC-Cho-024801	Choloepus hoffmanni	89.11	0.00e+00	656.00
IUUC-Dre-028437	Danio rerio	46.81	1.00e-85	309.00
IUUC-Dno-029267	Dasypus novemcinctus	88.83	0.00e+00	660.00
IUUC-Ete-032726	Echinops telfairi	73.74	5.00e-152	530.00
IUUC-Eca-033621	Equus caballus	90.73	4.00e-178	616.00
IUUC-Eeu-034461	Erinaceus europaeus	76.54	1.00e-160	558.00
IUUC-Fca-036410	Felis catus	89.66	0.00e+00	639.00
IUUC-Fal-036676	Ficedula albicollis	64.99	1.00e-129	456.00
IUUC-Gmo-039597	Gadus morhua	34.48	9.00e-18	84.30
IUUC-Gga-040760	Gallus gallus	63.32	2.00e-71	261.00
IUUC-Gac-041905	Gasterosteus aculeatus	49.32	2.00e-89	322.00
IUUC-Gma-043066	Glycine max	30.00	6.00e-17	81.60
IUUC-Ggo-044881	Gorilla gorilla	98.88	0.00e+00	692.00
IUUC-Hsa-046836	Homo sapiens	98.88	0.00e+00	689.00
IUUC-Hvu-047651	Hordeum vulgare	25.58	3.00e-24	105.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	91.60	0.00e+00	650.00
IUUC-Lch-050406	Latimeria chalumnae	52.94	7.00e-95	340.00
IUUC-Loc-052878	Lepisosteus oculatus	53.04	1.00e-98	352.00
IUUC-Laf-053547	Loxodonta africana	87.39	0.00e+00	640.00
IUUC-Mcc-054646	Macaca mulatta	98.04	0.00e+00	686.00
IUUC-Meu-056381	Macropus eugenii	76.54	7.00e-163	566.00
IUUC-Mtr-058656	Medicago truncatula	25.67	3.00e-18	85.90
IUUC-Mmr-061601	Microcebus murinus	89.64	0.00e+00	660.00
IUUC-Mdo-062305	Monodelphis domestica	76.82	1.00e-164	572.00
IUUC-Mmu-063213	Mus musculus	83.52	8.00e-171	592.00
IUUC-Mac-064940	Musa acuminata	24.69	1.00e-28	120.00
IUUC-Mpu-066629	Mustela putorius furo	90.50	0.00e+00	644.00
IUUC-Opr-071180	Ochotona princeps	85.63	3.00e-155	540.00
IUUC-Ont-071912	Oreochromis niloticus	47.55	1.00e-96	346.00
IUUC-Ocu-074874	Oryctolagus cuniculus	89.11	0.00e+00	661.00
IUUC-Oba-075815	Oryza barthii	25.45	1.00e-14	73.90
IUUC-Obr-076835	Oryza brachyantha	33.96	2.00e-20	93.20
IUUC-Ogu-077977	Oryza glumaepatula	30.62	5.00e-14	72.00
IUUC-Oin-079206	Oryza indica	26.17	1.00e-24	107.00
IUUC-Olo-080621	Oryza longistaminata	29.23	9.00e-14	70.90
IUUC-Ome-081261	Oryza meridionalis	23.88	3.00e-13	68.90
IUUC-Opu-083256	Oryza punctata	24.00	1.00e-14	73.90
IUUC-Osa-085892	Oryza sativa	26.17	1.00e-24	107.00
IUUC-Ola-086701	Oryzias latipes	47.55	3.00e-90	325.00
IUUC-Olu-087593	Ostreococcus lucimarinus	22.75	4.00e-08	52.40
IUUC-Oga-088152	Otolemur garnettii	89.36	0.00e+00	658.00
IUUC-Oar-089681	Ovis aries	87.71	1.00e-177	615.00
IUUC-Ptr-091142	Pan troglodytes	99.16	0.00e+00	692.00
IUUC-Pan-092435	Papio anubis	98.04	0.00e+00	659.00
IUUC-Psi-093255	Pelodiscus sinensis	68.82	2.00e-145	508.00
IUUC-Ppa-095829	Physcomitrella patens	30.26	2.00e-30	126.00
IUUC-Pfo-097339	Poecilia formosa	45.03	1.00e-85	309.00
IUUC-Pab-098274	Pongo abelii	97.77	0.00e+00	677.00
IUUC-Pop-099705	Populus trichocarpa	25.07	2.00e-27	116.00
IUUC-Pca-100451	Procavia capensis	85.39	0.00e+00	642.00
IUUC-Ppe-101220	Prunus persica	26.07	9.00e-27	114.00
IUUC-Pva-102385	Pteropus vampyrus	90.50	0.00e+00	642.00
IUUC-Rno-105765	Rattus norvegicus	82.12	4.00e-167	580.00
IUUC-Sha-106533	Sarcophilus harrisii	74.86	6.00e-160	556.00
IUUC-Smo-109248	Selaginella moellendorffii	26.49	5.00e-29	121.00
IUUC-Sit-110297	Setaria italica	25.80	2.00e-21	95.90
IUUC-Sly-111617	Solanum lycopersicum	31.55	1.00e-23	103.00
IUUC-Stu-112531	Solanum tuberosum	31.55	2.00e-23	102.00
IUUC-Sar-113647	Sorex araneus	81.56	2.00e-175	608.00
IUUC-Sbi-114621	Sorghum bicolor	26.70	2.00e-26	113.00
IUUC-Tgu-116482	Taeniopygia guttata	65.27	1.00e-125	442.00
IUUC-Tru-118622	Takifugu rubripes	47.97	1.00e-86	313.00
IUUC-Tsy-119474	Tarsius syrichta	88.55	0.00e+00	662.00
IUUC-Tni-120250	Tetraodon nigroviridis	47.70	9.00e-80	290.00
IUUC-Tca-121583	Theobroma cacao	27.41	4.00e-29	122.00
IUUC-Tae-123764	Triticum aestivum	33.00	5.00e-24	105.00
IUUC-Tur-126076	Triticum urartu	22.25	4.00e-14	72.40
IUUC-Tbe-127545	Tupaia belangeri	88.52	2.00e-178	618.00
IUUC-Ttr-128497	Tursiops truncatus	88.27	6.00e-179	619.00
IUUC-Vpa-130772	Vicugna pacos	89.11	0.00e+00	628.00
IUUC-Vvi-131632	Vitis vinifera	26.17	5.00e-32	131.00
IUUC-Xma-133432	Xiphophorus maculatus	45.57	4.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence