iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131632

UUCD1 version

UUC-ViV-00750

Ensembl Protein ID

VIT_10s0003g01570.t01

UniProt Accession

F6HMB2; F6HMB2_VITVI

Genbank Protein ID

CCB55700.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595992

Gene Name

VIT_10s0003g01570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_10s0003g01570	VIT_10s0003g01570.t01	VIT_10s0003g01570.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-18	65.6	287	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDl 30
           gHt+sv+c+af      ++ ++sG++D+t+kvWD 
   Q: 287  GHTASVSCVAFalfgeRGKSIISGGNDKTVKVWDC 321
           8************9875599**************5 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAEARRLRGH KATATCCIAS RDRPGLVATS GEDGCICWFD MRCKDVVLTM DLGVNPISSL 60
CFKPGNEDII YVSSGSEVKC FDVHLADAWK PLESYNYNKE EINQIACNSK SSFLASADDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG CACGACGGTT GAGAGGTCAC AAGGCCACCG CCACCTGCTG CATCGCCTCC 60
CGCGACCGCC CTGGCCTCGT CGCCACTTCC GGCGAGGTAA GCTTTTTCCT TTCTTATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	55.41	3.00e-106	377.00
IUUC-Aml-001203	Ailuropoda melanoleuca	26.18	3.00e-30	125.00
IUUC-Atr-002680	Amborella trichopoda	61.71	2.00e-106	377.00
IUUC-Apl-003656	Anas platyrhynchos	27.07	4.00e-25	107.00
IUUC-Aca-004987	Anolis carolinensis	30.08	3.00e-27	115.00
IUUC-Aly-006254	Arabidopsis lyrata	65.25	3.00e-140	490.00
IUUC-Ath-006632	Arabidopsis thaliana	64.72	1.00e-137	481.00
IUUC-Ame-011032	Astyanax mexicanus	25.60	2.00e-26	112.00
IUUC-Bta-012588	Bos taurus	26.33	2.00e-31	128.00
IUUC-Bdi-014532	Brachypodium distachyon	56.18	2.00e-116	411.00
IUUC-Bol-015542	Brassica oleracea	61.29	2.00e-121	429.00
IUUC-Bra-017046	Brassica rapa	65.11	3.00e-133	468.00
IUUC-Cja-019365	Callithrix jacchus	26.37	1.00e-31	129.00
IUUC-Cfa-021090	Canis familiaris	25.69	1.00e-31	129.00
IUUC-Cpo-021517	Cavia porcellus	24.94	2.00e-26	112.00
IUUC-Csa-023041	Chlorocebus sabaeus	25.81	5.00e-31	127.00
IUUC-Cho-024801	Choloepus hoffmanni	26.21	2.00e-30	125.00
IUUC-Dre-028437	Danio rerio	27.30	3.00e-20	91.70
IUUC-Dno-029267	Dasypus novemcinctus	26.57	2.00e-29	122.00
IUUC-Ete-032726	Echinops telfairi	20.20	3.00e-09	55.50
IUUC-Eca-033621	Equus caballus	27.36	6.00e-31	127.00
IUUC-Eeu-034461	Erinaceus europaeus	27.05	4.00e-29	121.00
IUUC-Fca-036410	Felis catus	26.18	2.00e-29	122.00
IUUC-Fal-036676	Ficedula albicollis	26.88	3.00e-28	118.00
IUUC-Gac-041905	Gasterosteus aculeatus	26.55	4.00e-27	114.00
IUUC-Gma-043066	Glycine max	67.02	3.00e-128	450.00
IUUC-Ggo-044881	Gorilla gorilla	25.81	3.00e-31	128.00
IUUC-Hsa-046836	Homo sapiens	26.05	7.00e-32	130.00
IUUC-Hvu-047651	Hordeum vulgare	57.87	2.00e-117	414.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	27.27	2.00e-32	132.00
IUUC-Lch-050406	Latimeria chalumnae	26.91	6.00e-19	87.40
IUUC-Lpe-051023	Leersia perrieri	48.88	8.00e-96	342.00
IUUC-Loc-052878	Lepisosteus oculatus	25.06	1.00e-26	113.00
IUUC-Laf-053547	Loxodonta africana	26.37	1.00e-30	126.00
IUUC-Mcc-054646	Macaca mulatta	25.81	1.00e-30	125.00
IUUC-Meu-056381	Macropus eugenii	25.54	2.00e-25	108.00
IUUC-Mtr-058656	Medicago truncatula	62.86	4.00e-128	450.00
IUUC-Mmr-061601	Microcebus murinus	25.87	2.00e-31	129.00
IUUC-Mdo-062305	Monodelphis domestica	24.82	2.00e-26	112.00
IUUC-Mmu-063213	Mus musculus	25.56	2.00e-27	115.00
IUUC-Mac-064940	Musa acuminata	60.58	1.00e-135	475.00
IUUC-Mpu-066629	Mustela putorius furo	25.50	5.00e-31	127.00
IUUC-Nle-069860	Nomascus leucogenys	25.93	2.00e-31	129.00
IUUC-Opr-071180	Ochotona princeps	24.52	5.00e-18	84.30
IUUC-Ont-071912	Oreochromis niloticus	26.79	8.00e-26	110.00
IUUC-Ocu-074874	Oryctolagus cuniculus	25.37	1.00e-30	126.00
IUUC-Oba-075815	Oryza barthii	51.87	4.00e-95	340.00
IUUC-Obr-076835	Oryza brachyantha	55.83	9.00e-89	318.00
IUUC-Ogu-077977	Oryza glumaepatula	50.80	1.00e-92	332.00
IUUC-Oin-079206	Oryza indica	57.37	4.00e-116	410.00
IUUC-Olo-080621	Oryza longistaminata	52.83	2.00e-96	345.00
IUUC-Ome-081261	Oryza meridionalis	51.75	6.00e-93	333.00
IUUC-Oni-082280	Oryza nivara	41.30	1.00e-39	155.00
IUUC-Opu-083256	Oryza punctata	52.14	2.00e-95	341.00
IUUC-Oru-084531	Oryza rufipogon	48.26	6.00e-82	296.00
IUUC-Osa-085892	Oryza sativa	57.37	4.00e-116	410.00
IUUC-Ola-086701	Oryzias latipes	27.64	5.00e-25	107.00
IUUC-Olu-087593	Ostreococcus lucimarinus	24.05	6.00e-09	54.30
IUUC-Oga-088152	Otolemur garnettii	27.09	1.00e-31	129.00
IUUC-Oar-089681	Ovis aries	25.44	4.00e-31	127.00
IUUC-Ptr-091142	Pan troglodytes	26.05	1.00e-31	129.00
IUUC-Pan-092435	Papio anubis	26.18	6.00e-29	120.00
IUUC-Psi-093255	Pelodiscus sinensis	32.18	4.00e-27	114.00
IUUC-Ppa-095829	Physcomitrella patens	43.57	2.00e-76	278.00
IUUC-Pfo-097339	Poecilia formosa	27.64	3.00e-25	108.00
IUUC-Pab-098274	Pongo abelii	26.30	7.00e-30	123.00
IUUC-Pop-099705	Populus trichocarpa	67.45	7.00e-142	495.00
IUUC-Pca-100451	Procavia capensis	25.81	2.00e-28	118.00
IUUC-Ppe-101220	Prunus persica	72.53	6.00e-159	552.00
IUUC-Pva-102385	Pteropus vampyrus	25.75	4.00e-31	127.00
IUUC-Rno-105765	Rattus norvegicus	26.62	6.00e-29	120.00
IUUC-Sha-106533	Sarcophilus harrisii	24.63	3.00e-27	114.00
IUUC-Smo-109248	Selaginella moellendorffii	36.34	2.00e-65	241.00
IUUC-Sit-110297	Setaria italica	58.04	9.00e-85	305.00
IUUC-Sly-111617	Solanum lycopersicum	66.93	8.00e-136	475.00
IUUC-Stu-112531	Solanum tuberosum	68.00	7.00e-137	479.00
IUUC-Sar-113647	Sorex araneus	25.12	5.00e-28	117.00
IUUC-Sbi-114621	Sorghum bicolor	59.14	6.00e-128	449.00
IUUC-Tgu-116482	Taeniopygia guttata	25.63	3.00e-22	98.20
IUUC-Tru-118622	Takifugu rubripes	27.73	4.00e-22	97.80
IUUC-Tsy-119474	Tarsius syrichta	25.31	2.00e-29	122.00
IUUC-Tni-120250	Tetraodon nigroviridis	25.08	3.00e-13	68.60
IUUC-Tca-121583	Theobroma cacao	72.75	3.00e-164	570.00
IUUC-Tae-123764	Triticum aestivum	58.93	5.00e-120	423.00
IUUC-Tur-126076	Triticum urartu	49.74	7.00e-93	333.00
IUUC-Tbe-127545	Tupaia belangeri	27.18	5.00e-32	130.00
IUUC-Ttr-128497	Tursiops truncatus	25.44	5.00e-31	127.00
IUUC-Vpa-130772	Vicugna pacos	25.06	2.00e-29	122.00
IUUC-Xma-133432	Xiphophorus maculatus	27.19	5.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence