iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054538

Ensembl Protein ID

ENSLAFP00000021003.1

UniProt Accession

G3TZJ5; G3TZJ5_LOXAF

Protein Name

Uncharacterized protein

Gene Name

LDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000023028.2	ENSLAFT00000022246.2	ENSLAFP00000016364.2
ENSLAFG00000023028.2	ENSLAFT00000025312.1	ENSLAFP00000021003.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	64.41	2.00e-125	446.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Loxodonta africana

Protein Sequence
(Fasta)

EGSGDPFFLS PLGCSSKRHT PYGNQTDYRI FELNKRLQNW TEECDNLWWD AFTTEFFEDD 60
AMLTITFCLE DGPKRYTIGR TLIPRYFRSI FEGGATELYY VLKHPKEAFH SNFVSLDCDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGTGG GCTGTGCTTG TCCTGGTGAG TGGGGCGCGC GGCCGCCCGA ACCCTCCCTC 60
CCTAACCCTT TCCGCGGACC CTCACCCCTT GTTTGGCGAG AACTTGGTGT GGGTTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	24.24	7.00e-04	39.70
IUUC-Aml-002031	Ailuropoda melanoleuca	96.73	0.00e+00	648.00
IUUC-Atr-003083	Amborella trichopoda	25.62	3.00e-04	40.80
IUUC-Apl-004210	Anas platyrhynchos	98.19	2.00e-148	518.00
IUUC-Aca-005241	Anolis carolinensis	95.91	0.00e+00	642.00
IUUC-Aly-006204	Arabidopsis lyrata	23.84	6.00e-06	46.60
IUUC-Ath-007339	Arabidopsis thaliana	23.84	5.00e-06	46.60
IUUC-Acl-008255	Aspergillus clavatus	20.63	4.00e-06	47.00
IUUC-Ame-010910	Astyanax mexicanus	91.01	1.00e-176	612.00
IUUC-Bgr-012180	Blumeria graminis	22.39	3.00e-05	43.90
IUUC-Bta-012596	Bos taurus	72.28	3.00e-156	544.00
IUUC-Bci-013927	Botrytis cinerea	25.56	3.00e-06	47.00
IUUC-Bol-015721	Brassica oleracea	23.84	3.00e-06	47.00
IUUC-Bra-017183	Brassica rapa	23.84	3.00e-06	47.40
IUUC-Cel-018189	Caenorhabditis elegans	33.19	2.00e-28	120.00
IUUC-Cja-019586	Callithrix jacchus	73.91	5.00e-162	563.00
IUUC-Cfa-021188	Canis familiaris	96.73	0.00e+00	647.00
IUUC-Cpo-022350	Cavia porcellus	96.46	0.00e+00	641.00
IUUC-Csa-023816	Chlorocebus sabaeus	96.73	0.00e+00	647.00
IUUC-Cho-024958	Choloepus hoffmanni	60.00	5.00e-67	247.00
IUUC-Cin-025721	Ciona intestinalis	50.16	1.00e-86	312.00
IUUC-Csv-026065	Ciona savignyi	50.47	2.00e-91	328.00
IUUC-Dre-027356	Danio rerio	68.67	4.00e-153	534.00
IUUC-Dno-029918	Dasypus novemcinctus	96.18	7.00e-178	616.00
IUUC-Dor-030634	Dipodomys ordii	97.00	0.00e+00	650.00
IUUC-Dse-031245	Dothistroma septosporum	24.67	2.00e-04	41.20
IUUC-Dme-031667	Drosophila melanogaster	63.05	1.00e-122	433.00
IUUC-Ete-032246	Echinops telfairi	72.28	1.00e-157	548.00
IUUC-Eca-034015	Equus caballus	73.91	4.00e-162	563.00
IUUC-Eeu-034902	Erinaceus europaeus	97.00	0.00e+00	650.00
IUUC-Fca-035903	Felis catus	97.28	0.00e+00	656.00
IUUC-Fal-037407	Ficedula albicollis	71.74	7.00e-155	539.00
IUUC-Gmo-039466	Gadus morhua	87.91	0.00e+00	637.00
IUUC-Ggr-040030	Gaeumannomyces graminis	27.08	7.00e-03	36.20
IUUC-Gga-040214	Gallus gallus	95.37	0.00e+00	633.00
IUUC-Gac-042214	Gasterosteus aculeatus	87.57	0.00e+00	639.00
IUUC-Gma-042794	Glycine max	23.90	4.00e-06	47.00
IUUC-Ggo-044988	Gorilla gorilla	73.64	2.00e-162	565.00
IUUC-Hsa-046092	Homo sapiens	73.37	6.00e-159	553.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	97.00	0.00e+00	649.00
IUUC-Lch-049895	Latimeria chalumnae	81.20	2.00e-99	354.00
IUUC-Lpe-050806	Leersia perrieri	25.34	7.00e-06	46.20
IUUC-Loc-052845	Lepisosteus oculatus	93.19	0.00e+00	636.00
IUUC-Lma-053090	Leptosphaeria maculans	23.62	3.00e-04	40.80
IUUC-Mcc-055116	Macaca mulatta	68.77	9.00e-121	426.00
IUUC-Meu-056777	Macropus eugenii	91.28	4.00e-171	593.00
IUUC-Mpo-057376	Magnaporthe poae	27.16	5.00e-03	37.00
IUUC-Mtr-058142	Medicago truncatula	25.83	4.00e-06	47.00
IUUC-Mga-059716	Meleagris gallopavo	71.20	8.00e-154	536.00
IUUC-Mmr-060649	Microcebus murinus	73.37	9.00e-161	559.00
IUUC-Mdo-062535	Monodelphis domestica	73.91	6.00e-159	553.00
IUUC-Mmu-064036	Mus musculus	72.83	2.00e-159	555.00
IUUC-Mac-065338	Musa acuminata	23.70	3.00e-05	44.30
IUUC-Mpu-065719	Mustela putorius furo	97.00	0.00e+00	649.00
IUUC-Mlu-067219	Myotis lucifugus	95.91	0.00e+00	642.00
IUUC-Ncr-068691	Neurospora crassa	22.73	2.00e-04	41.20
IUUC-Nle-068983	Nomascus leucogenys	74.30	3.00e-159	554.00
IUUC-Opr-070467	Ochotona princeps	97.00	0.00e+00	650.00
IUUC-Ont-071566	Oreochromis niloticus	90.46	0.00e+00	645.00
IUUC-Oan-073368	Ornithorhynchus anatinus	95.91	0.00e+00	635.00
IUUC-Ocu-074854	Oryctolagus cuniculus	74.44	2.00e-159	555.00
IUUC-Ome-081687	Oryza meridionalis	24.64	3.00e-03	37.00
IUUC-Ola-086364	Oryzias latipes	90.74	0.00e+00	645.00
IUUC-Oga-088235	Otolemur garnettii	72.28	8.00e-158	549.00
IUUC-Oar-089547	Ovis aries	96.73	0.00e+00	648.00
IUUC-Ptr-091423	Pan troglodytes	73.91	7.00e-162	562.00
IUUC-Pan-092378	Papio anubis	96.73	0.00e+00	648.00
IUUC-Psi-093638	Pelodiscus sinensis	73.91	4.00e-156	543.00
IUUC-Pma-094384	Petromyzon marinus	65.92	3.00e-52	197.00
IUUC-Pno-095027	Phaeosphaeria nodorum	20.55	6.00e-04	39.70
IUUC-Pfo-096031	Poecilia formosa	90.42	0.00e+00	646.00
IUUC-Pab-097886	Pongo abelii	74.30	3.00e-159	554.00
IUUC-Pop-099430	Populus trichocarpa	25.43	1.00e-05	45.40
IUUC-Pca-101138	Procavia capensis	97.00	0.00e+00	650.00
IUUC-Ppe-101293	Prunus persica	28.57	6.00e-06	45.80
IUUC-Pva-103215	Pteropus vampyrus	73.91	7.00e-163	566.00
IUUC-Pte-104238	Pyrenophora teres	24.41	4.00e-04	39.70
IUUC-Rno-105968	Rattus norvegicus	73.10	1.00e-159	555.00
IUUC-Sha-107595	Sarcophilus harrisii	96.19	0.00e+00	636.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	26.14	9.00e-06	45.40
IUUC-Smo-109552	Selaginella moellendorffii	18.65	4.00e-04	40.40
IUUC-Sly-110873	Solanum lycopersicum	28.57	1.00e-05	45.40
IUUC-Stu-112586	Solanum tuberosum	20.09	3.00e-03	37.40
IUUC-Sar-113076	Sorex araneus	71.37	9.00e-105	373.00
IUUC-Sre-115143	Sporisorium reilianum	18.84	3.60e-02	33.90
IUUC-Ssc-115755	Sus scrofa	96.46	0.00e+00	641.00
IUUC-Tgu-117326	Taeniopygia guttata	71.47	4.00e-154	537.00
IUUC-Tru-117858	Takifugu rubripes	74.05	7.00e-162	563.00
IUUC-Tsy-119296	Tarsius syrichta	68.21	2.00e-143	501.00
IUUC-Tni-119822	Tetraodon nigroviridis	88.48	0.00e+00	629.00
IUUC-Tca-120935	Theobroma cacao	23.78	2.00e-06	47.80
IUUC-Tbe-127366	Tupaia belangeri	95.91	0.00e+00	631.00
IUUC-Ttr-128484	Tursiops truncatus	74.24	2.00e-147	514.00
IUUC-Vpa-130304	Vicugna pacos	70.89	7.00e-121	426.00
IUUC-Vvi-131560	Vitis vinifera	28.42	2.00e-05	45.10
IUUC-Xtr-132062	Xenopus tropicalis	94.82	0.00e+00	630.00
IUUC-Xma-134288	Xiphophorus maculatus	93.52	0.00e+00	649.00
IUUC-Yli-134374	Yarrowia lipolytica	20.00	5.00e-06	46.20
IUUC-Zma-135310	Zea mays	22.01	6.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence