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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105793
Ensembl Protein ID ENSRNOP00000073092.1
UniProt Accession A0A0G2K4L7; A0A0G2K4L7_RAT
Genbank Protein ID ENSRNOP00000073092
Protein Name DNA polymerase kappa
Genbank Nucleotide ID AABR07007758
Gene Name Polk
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000060626.1 ENSRNOT00000078639.1 ENSRNOP00000073092.1
ENSRNOG00000060626.1 ENSRNOT00000091418.1 ENSRNOP00000070520.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/ZnF/UBZ 1.30e-15 57.6 762 787
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/ZnF/UBZ
   S: 2    lvCPvC...qkmvdqtdfeeHlDeCl 24
           lvCPvC   q++ d+t+f+ H+D Cl
   Q: 762  LVCPVCnleQETSDLTLFNIHVDICL 787
           89****988888*************8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MDNTKEKNNF KDALLLRMGL NDNKAGMEGL DKEKINKIIM EATKGSRFYG NELKKEKQVN 60
QRIENMMQQK AQITSQQLRK AQLQVDRFAM ELERNRNLNN TIVHVDMDAF YAAVEMRDNP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105793|UBD,UBZ|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAACTAGTGT GTGTGTCCTG GGCGCGCGAA AGACTGGTTG CCTAGGGGAA CCTTCTGAGA 60
GCAAGTGGGC TTCTTTTGAC AGTTGTGTGC CCCTTCGGTC CAGCCTGGCT TCCGATTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105793|UBD,UBZ|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR017061--DNA_pol_eta/kappa
IPR017961--DNA_pol_Y-fam_little_finger
IPR022880--DNApol_IV
IPR001126--UmuC
IPR006642--Znf_Rad18_put
PROSITE

PS50173--UMUC
Pfam

PF00817--IMS
PF11799--IMS_C
SMART

SM00734--ZnF_Rad18
Gene Ontology

GO:0016604--C:nuclear body
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0006297--P:nucleotide-excision repair, DNA gap filling
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001908 Ailuropoda melanoleuca 71.66 0.00e+00 1203.00
IUUC-Apl-003228 Anas platyrhynchos 62.33 0.00e+00 721.00
IUUC-Aca-005080 Anolis carolinensis 56.10 0.00e+00 822.00
IUUC-Afl-008688 Aspergillus flavus 40.20 5.00e-30 125.00
IUUC-Afu-008792 Aspergillus fumigatus 42.52 1.00e-47 184.00
IUUC-Aor-010225 Aspergillus oryzae 45.23 5.00e-44 172.00
IUUC-Ame-011889 Astyanax mexicanus 50.43 0.00e+00 696.00
IUUC-Bta-013127 Bos taurus 71.26 0.00e+00 1211.00
IUUC-Bra-017144 Brassica rapa 53.93 6.00e-59 222.00
IUUC-Cel-018629 Caenorhabditis elegans 43.62 3.00e-95 342.00
IUUC-Cja-019598 Callithrix jacchus 71.44 0.00e+00 1177.00
IUUC-Cfa-020661 Canis familiaris 71.18 0.00e+00 1187.00
IUUC-Cpo-022040 Cavia porcellus 67.63 0.00e+00 1094.00
IUUC-Csa-023669 Chlorocebus sabaeus 72.64 0.00e+00 1196.00
IUUC-Cho-024910 Choloepus hoffmanni 70.93 5.00e-91 329.00
IUUC-Csv-026293 Ciona savignyi 51.02 2.00e-130 459.00
IUUC-Dre-028317 Danio rerio 62.41 0.00e+00 647.00
IUUC-Dno-029973 Dasypus novemcinctus 71.05 0.00e+00 1186.00
IUUC-Dor-030667 Dipodomys ordii 71.64 0.00e+00 1208.00
IUUC-Dse-031339 Dothistroma septosporum 47.29 6.00e-50 192.00
IUUC-Ete-033030 Echinops telfairi 68.11 0.00e+00 1120.00
IUUC-Eca-033959 Equus caballus 72.82 0.00e+00 1207.00
IUUC-Fca-036160 Felis catus 69.58 0.00e+00 1167.00
IUUC-Fal-037116 Ficedula albicollis 54.21 0.00e+00 772.00
IUUC-Gmo-039003 Gadus morhua 50.06 0.00e+00 707.00
IUUC-Gga-040431 Gallus gallus 53.35 0.00e+00 795.00
IUUC-Gac-042455 Gasterosteus aculeatus 50.38 0.00e+00 690.00
IUUC-Gma-043303 Glycine max 53.26 4.00e-56 213.00
IUUC-Ggo-045024 Gorilla gorilla 71.85 0.00e+00 1201.00
IUUC-Hsa-046294 Homo sapiens 72.48 0.00e+00 1217.00
IUUC-Itr-048670 Ictidomys tridecemlineatus 71.24 0.00e+00 1159.00
IUUC-Lch-050251 Latimeria chalumnae 50.72 0.00e+00 753.00
IUUC-Loc-051939 Lepisosteus oculatus 56.82 0.00e+00 677.00
IUUC-Laf-054562 Loxodonta africana 67.32 0.00e+00 1093.00
IUUC-Mcc-055653 Macaca mulatta 72.82 0.00e+00 1229.00
IUUC-Meu-055994 Macropus eugenii 74.51 1.00e-142 500.00
IUUC-Mga-059228 Meleagris gallopavo 43.43 3.00e-173 602.00
IUUC-Mvi-060383 Microbotryum violaceum 38.86 4.00e-35 143.00
IUUC-Mmr-061202 Microcebus murinus 71.56 0.00e+00 1228.00
IUUC-Mdo-062829 Monodelphis domestica 61.92 0.00e+00 928.00
IUUC-Mmu-063675 Mus musculus 88.29 0.00e+00 1511.00
IUUC-Mpu-066825 Mustela putorius furo 71.07 0.00e+00 1184.00
IUUC-Mlu-067316 Myotis lucifugus 72.79 0.00e+00 1222.00
IUUC-Nle-069272 Nomascus leucogenys 72.51 0.00e+00 1216.00
IUUC-Opr-070616 Ochotona princeps 66.47 0.00e+00 1067.00
IUUC-Ont-072011 Oreochromis niloticus 47.01 0.00e+00 689.00
IUUC-Oan-073343 Ornithorhynchus anatinus 60.11 0.00e+00 939.00
IUUC-Ocu-073766 Oryctolagus cuniculus 65.82 0.00e+00 972.00
IUUC-Ogl-077190 Oryza glaberrima 46.03 2.00e-42 167.00
IUUC-Ogu-078415 Oryza glumaepatula 51.87 4.00e-56 212.00
IUUC-Osa-085963 Oryza sativa 46.03 1.00e-42 167.00
IUUC-Ola-087034 Oryzias latipes 48.96 0.00e+00 666.00
IUUC-Oga-088157 Otolemur garnettii 68.85 0.00e+00 1166.00
IUUC-Oar-089218 Ovis aries 71.05 0.00e+00 1222.00
IUUC-Ptr-091552 Pan troglodytes 72.48 0.00e+00 1220.00
IUUC-Pan-092646 Papio anubis 71.97 0.00e+00 1207.00
IUUC-Psi-093608 Pelodiscus sinensis 55.43 0.00e+00 842.00
IUUC-Pma-094381 Petromyzon marinus 49.56 0.00e+00 673.00
IUUC-Pno-095081 Phaeosphaeria nodorum 40.29 1.00e-39 157.00
IUUC-Pfo-096545 Poecilia formosa 50.93 0.00e+00 731.00
IUUC-Pab-097613 Pongo abelii 68.00 0.00e+00 1174.00
IUUC-Pca-101071 Procavia capensis 57.70 1.00e-133 469.00
IUUC-Pva-102252 Pteropus vampyrus 72.00 0.00e+00 1200.00
IUUC-Pgr-103567 Puccinia graminis 33.25 2.00e-41 164.00
IUUC-Ptt-103934 Puccinia triticina 26.50 1.00e-24 108.00
IUUC-Sha-107230 Sarcophilus harrisii 62.54 0.00e+00 1006.00
IUUC-Spo-108028 Schizosaccharomyces pombe 44.62 1.00e-42 167.00
IUUC-Sly-111390 Solanum lycopersicum 54.21 1.00e-59 224.00
IUUC-Stu-112284 Solanum tuberosum 54.45 3.00e-60 226.00
IUUC-Sar-113594 Sorex araneus 62.99 0.00e+00 1007.00
IUUC-Sre-115078 Sporisorium reilianum 40.30 4.00e-38 152.00
IUUC-Ssc-116013 Sus scrofa 70.31 0.00e+00 1214.00
IUUC-Tgu-117442 Taeniopygia guttata 53.70 0.00e+00 774.00
IUUC-Tru-117935 Takifugu rubripes 55.07 0.00e+00 639.00
IUUC-Tsy-119489 Tarsius syrichta 55.54 1.00e-161 563.00
IUUC-Tni-120543 Tetraodon nigroviridis 54.07 4.00e-173 601.00
IUUC-Tbe-128112 Tupaia belangeri 74.04 0.00e+00 760.00
IUUC-Ttr-128371 Tursiops truncatus 65.71 0.00e+00 1078.00
IUUC-Uma-129377 Ustilago maydis 29.51 4.00e-40 159.00
IUUC-Vpa-130243 Vicugna pacos 72.28 0.00e+00 1234.00
IUUC-Xtr-132453 Xenopus tropicalis 52.25 0.00e+00 764.00
IUUC-Xma-133255 Xiphophorus maculatus 50.55 0.00e+00 718.00
Created Date 25-Jun-2017

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