iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012462

Ensembl Protein ID

ENSBTAP00000007218.5

UniProt Accession

G3X6I6; G3X6I6_BOVIN

Genbank Protein ID

ENSBTAP00000007218

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02029634

Gene Name

WDR36

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000005489.5	ENSBTAT00000007218.5	ENSBTAP00000007218.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-22	78.4	617	654
UBD/Beta-Prp	2.60e-49	168.1	286	576

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ ++++ f +d + l+s+s D++i+ WDl +g l+
   Q: 617  GHQGQINDMTFsPDgRWLISASMDCSIRTWDLPSGCLI 654
           8***********99999***************999876 PP

UBD/Beta-Prp

   S: 11   svitcvkf..spdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkg 92
           ++it++ f  +++ +++a+gs  g i +wd++++kl+ ++   h+ +++ ++f +++++lvt + D+++++w    +   g  ++   g
   Q: 286  GPITSISFrtADGHPVMAAGSPCGHIGLWDLEDKKLINQMrNAHSTAIAGLTFLHREPLLVTNGADNALRIWifdgPAGEGRLLRFRMG 374
           799*****99999***************************99******************************7765555999999999* PP
   S: 93   hedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee......................tlsghdgvvncvvvhpdgnllvsGslD 158
           h++ ++ ++++  +g++++s+s+d t++ + + +++  ++                       l + +++    +  +d + +v+++  
   Q: 375  HSAPLTRIRYYGqNGQHILSASQDGTLQSFSTVHEKFNKSlghglinkkrvkrkglqntmsvRLPPVTEFAAEEARESDWDGIVACHQG 463
           **********99788**************999988888889999*99999777777775555233333333322222322446666654 PP
   S: 159  r.tvrlWdlktgkllrtl.....tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec...vrtlnghtdnvksvrfspnderlv 238
           +  +  W+ ++ ++  ++      + +    + ++++s g++ v g   g v ++++q+g       + ++h+  v+ v+++  +++ +
   Q: 464  KlSCSTWNYQRSTIGAHFlrpagLKTDSTTATAVDITSCGNFAVIGLSSGAVDVYNMQSGIHrgsFGRDQAHKGSVRGVAVDGLNQLTI 552
           4256677778888888889997644466666777788888******************5554222566689****************** PP
   S: 239  sgssDgsiriWdlrsgdllktlql 262
           +++s+g++++W+ +++ l+++++l
   Q: 553  TAGSEGVLKFWNFKNKVLIHSVSL 576
           ***************999999887 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

FSCTEDSIRS LDWQRAPEAL GRRKRRSRGR ADGSRARGLP GTVGARPPST AVMERGPGER 60
TASALFAGFR ALGLFSSDIP HAVRFSALKR RFYVTTCVGK SFHTYDVQKL SLVAVSNSLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAGCTGCA CCGAAGACAG CATCCGCTCG CTCGATTGGC AGCGAGCACC GGAAGCGCTA 60
GGGCGCCGGA AGCGCCGGTC GAGGGTTGTG CTGCGCAGGA CGCGCTGACG GATCCCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030516--P:regulation of axon extension
GO:0001895--P:retina homeostasis
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	36.91	1.00e-148	520.00
IUUC-Aml-002289	Ailuropoda melanoleuca	90.19	0.00e+00	1697.00
IUUC-Atr-002859	Amborella trichopoda	33.72	1.00e-125	444.00
IUUC-Apl-003505	Anas platyrhynchos	74.32	0.00e+00	1209.00
IUUC-Aca-004339	Anolis carolinensis	72.33	0.00e+00	1286.00
IUUC-Aly-005913	Arabidopsis lyrata	37.53	1.00e-160	560.00
IUUC-Ath-006767	Arabidopsis thaliana	37.89	3.00e-164	572.00
IUUC-Ago-007763	Ashbya gossypii	32.24	5.00e-117	415.00
IUUC-Acl-008275	Aspergillus clavatus	33.57	4.00e-91	329.00
IUUC-Afl-008457	Aspergillus flavus	33.10	5.00e-89	322.00
IUUC-Afu-008914	Aspergillus fumigatus	33.29	6.00e-104	372.00
IUUC-Ani-009225	Aspergillus nidulans	32.46	1.00e-102	367.00
IUUC-Aor-010046	Aspergillus oryzae	31.51	2.00e-113	403.00
IUUC-Ate-010337	Aspergillus terreus	33.72	2.00e-114	407.00
IUUC-Ame-010963	Astyanax mexicanus	67.64	0.00e+00	1202.00
IUUC-Bgr-011973	Blumeria graminis	31.23	6.00e-114	405.00
IUUC-Bci-013940	Botrytis cinerea	31.57	3.00e-113	403.00
IUUC-Bdi-014725	Brachypodium distachyon	35.88	3.00e-149	522.00
IUUC-Bol-016534	Brassica oleracea	37.31	2.00e-156	546.00
IUUC-Bra-016781	Brassica rapa	36.52	2.00e-153	536.00
IUUC-Cel-018581	Caenorhabditis elegans	29.02	2.00e-93	337.00
IUUC-Cja-019675	Callithrix jacchus	91.63	0.00e+00	1672.00
IUUC-Cfa-020118	Canis familiaris	91.52	0.00e+00	1630.00
IUUC-Cpo-021798	Cavia porcellus	90.74	0.00e+00	1589.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	28.80	3.00e-26	113.00
IUUC-Csa-023547	Chlorocebus sabaeus	92.54	0.00e+00	1654.00
IUUC-Cho-024518	Choloepus hoffmanni	81.99	0.00e+00	861.00
IUUC-Cin-025339	Ciona intestinalis	46.63	0.00e+00	797.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.81	1.00e-110	394.00
IUUC-Cne-026859	Cryptococcus neoformans	34.48	3.00e-140	492.00
IUUC-Cme-027173	Cyanidioschyzon merolae	29.35	2.00e-89	324.00
IUUC-Dre-027733	Danio rerio	65.52	0.00e+00	1193.00
IUUC-Dno-029439	Dasypus novemcinctus	92.19	0.00e+00	1630.00
IUUC-Dor-030329	Dipodomys ordii	75.81	0.00e+00	1352.00
IUUC-Dse-031511	Dothistroma septosporum	30.88	8.00e-106	378.00
IUUC-Dme-031694	Drosophila melanogaster	40.00	0.00e+00	684.00
IUUC-Ete-032930	Echinops telfairi	80.88	0.00e+00	1352.00
IUUC-Eca-033302	Equus caballus	90.13	0.00e+00	1699.00
IUUC-Eeu-034516	Erinaceus europaeus	86.61	0.00e+00	1683.00
IUUC-Fca-036064	Felis catus	93.42	0.00e+00	1650.00
IUUC-Fal-037024	Ficedula albicollis	72.23	0.00e+00	1281.00
IUUC-Fox-037787	Fusarium oxysporum	29.43	6.00e-94	338.00
IUUC-Fso-038378	Fusarium solani	29.76	4.00e-97	349.00
IUUC-Gmo-039637	Gadus morhua	53.14	4.00e-153	534.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.74	3.00e-105	376.00
IUUC-Gga-040982	Gallus gallus	73.00	0.00e+00	1310.00
IUUC-Gac-041565	Gasterosteus aculeatus	57.21	0.00e+00	950.00
IUUC-Gma-043185	Glycine max	35.73	8.00e-158	550.00
IUUC-Ggo-045463	Gorilla gorilla	89.30	0.00e+00	1697.00
IUUC-Hsa-045675	Homo sapiens	88.97	0.00e+00	1693.00
IUUC-Hvu-047352	Hordeum vulgare	35.98	3.00e-134	473.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	91.31	0.00e+00	1672.00
IUUC-Kpa-049164	Komagataella pastoris	33.74	2.00e-112	400.00
IUUC-Lch-050476	Latimeria chalumnae	68.61	0.00e+00	1254.00
IUUC-Lpe-051556	Leersia perrieri	29.11	9.00e-95	341.00
IUUC-Loc-052820	Lepisosteus oculatus	68.16	0.00e+00	1224.00
IUUC-Lma-052961	Leptosphaeria maculans	33.23	6.00e-107	382.00
IUUC-Laf-054006	Loxodonta africana	90.04	0.00e+00	1605.00
IUUC-Mcc-055037	Macaca mulatta	88.85	0.00e+00	1694.00
IUUC-Mor-057280	Magnaporthe oryzae	29.93	1.00e-106	381.00
IUUC-Mpo-057408	Magnaporthe poae	29.78	3.00e-102	367.00
IUUC-Mtr-058473	Medicago truncatula	35.31	7.00e-155	541.00
IUUC-Mla-058892	Melampsora laricipopulina	34.27	2.00e-119	423.00
IUUC-Mga-059598	Meleagris gallopavo	62.24	0.00e+00	1027.00
IUUC-Mvi-060334	Microbotryum violaceum	35.44	5.00e-121	429.00
IUUC-Mmr-061239	Microcebus murinus	88.41	0.00e+00	1652.00
IUUC-Mdo-062471	Monodelphis domestica	80.89	0.00e+00	1422.00
IUUC-Mmu-063872	Mus musculus	88.32	0.00e+00	1635.00
IUUC-Mac-064631	Musa acuminata	36.18	2.00e-137	483.00
IUUC-Mpu-066039	Mustela putorius furo	93.53	0.00e+00	1698.00
IUUC-Mlu-067485	Myotis lucifugus	92.78	0.00e+00	1680.00
IUUC-Nfi-068319	Neosartorya fischeri	30.77	3.00e-103	370.00
IUUC-Ncr-068725	Neurospora crassa	30.26	3.00e-102	366.00
IUUC-Nle-069050	Nomascus leucogenys	88.97	0.00e+00	1692.00
IUUC-Opr-070437	Ochotona princeps	78.79	3.00e-137	482.00
IUUC-Ont-071574	Oreochromis niloticus	58.72	0.00e+00	1028.00
IUUC-Oan-072826	Ornithorhynchus anatinus	75.95	0.00e+00	1344.00
IUUC-Ocu-073995	Oryctolagus cuniculus	92.08	0.00e+00	1606.00
IUUC-Oba-075407	Oryza barthii	33.26	6.00e-123	434.00
IUUC-Obr-076451	Oryza brachyantha	36.65	1.00e-156	547.00
IUUC-Ogl-077535	Oryza glaberrima	36.14	3.00e-150	526.00
IUUC-Ogu-077995	Oryza glumaepatula	32.86	4.00e-123	435.00
IUUC-Oin-079431	Oryza indica	36.44	1.00e-152	533.00
IUUC-Olo-080495	Oryza longistaminata	32.90	1.00e-119	424.00
IUUC-Oni-082336	Oryza nivara	35.31	1.00e-140	494.00
IUUC-Opu-084028	Oryza punctata	34.40	2.00e-128	452.00
IUUC-Oru-084500	Oryza rufipogon	32.86	1.00e-120	427.00
IUUC-Osa-086242	Oryza sativa	36.33	2.00e-152	533.00
IUUC-Ola-086612	Oryzias latipes	56.19	0.00e+00	808.00
IUUC-Olu-087703	Ostreococcus lucimarinus	30.53	2.00e-110	394.00
IUUC-Oga-088572	Otolemur garnettii	90.97	0.00e+00	1629.00
IUUC-Oar-090363	Ovis aries	95.48	0.00e+00	1778.00
IUUC-Ptr-090477	Pan troglodytes	89.18	0.00e+00	1673.00
IUUC-Pan-092914	Papio anubis	92.52	0.00e+00	1680.00
IUUC-Psi-093019	Pelodiscus sinensis	73.46	0.00e+00	1308.00
IUUC-Pma-094303	Petromyzon marinus	51.52	0.00e+00	805.00
IUUC-Pno-094938	Phaeosphaeria nodorum	32.74	3.00e-99	357.00
IUUC-Ppa-095720	Physcomitrella patens	36.16	1.00e-154	540.00
IUUC-Pfo-097034	Poecilia formosa	56.84	0.00e+00	969.00
IUUC-Pab-097669	Pongo abelii	92.30	0.00e+00	1679.00
IUUC-Pop-098835	Populus trichocarpa	35.97	3.00e-154	539.00
IUUC-Pca-101097	Procavia capensis	78.10	1.00e-175	610.00
IUUC-Ppe-101430	Prunus persica	35.88	2.00e-156	546.00
IUUC-Pva-103152	Pteropus vampyrus	89.45	0.00e+00	1714.00
IUUC-Pgr-103517	Puccinia graminis	31.12	8.00e-124	438.00
IUUC-Ptt-103697	Puccinia triticina	32.85	2.00e-101	363.00
IUUC-Pte-104121	Pyrenophora teres	31.21	2.00e-105	377.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	31.51	2.00e-107	384.00
IUUC-Rno-105435	Rattus norvegicus	88.20	0.00e+00	1592.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.60	4.00e-109	389.00
IUUC-Sha-107272	Sarcophilus harrisii	80.98	0.00e+00	1364.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.00	4.00e-152	532.00
IUUC-Spo-108256	Schizosaccharomyces pombe	37.35	2.00e-152	533.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	31.27	4.00e-112	399.00
IUUC-Smo-108762	Selaginella moellendorffii	35.54	3.00e-154	539.00
IUUC-Sit-110051	Setaria italica	35.85	1.00e-151	530.00
IUUC-Sly-111181	Solanum lycopersicum	36.23	2.00e-157	549.00
IUUC-Stu-112018	Solanum tuberosum	35.78	1.00e-156	546.00
IUUC-Sar-113348	Sorex araneus	88.17	0.00e+00	1153.00
IUUC-Sbi-114282	Sorghum bicolor	36.98	3.00e-153	536.00
IUUC-Sre-114946	Sporisorium reilianum	33.13	7.00e-95	342.00
IUUC-Ssc-115287	Sus scrofa	91.08	0.00e+00	1727.00
IUUC-Tgu-117138	Taeniopygia guttata	69.50	0.00e+00	1079.00
IUUC-Tru-118232	Takifugu rubripes	58.30	0.00e+00	993.00
IUUC-Tsy-119502	Tarsius syrichta	74.13	0.00e+00	1355.00
IUUC-Tni-120378	Tetraodon nigroviridis	57.22	0.00e+00	971.00
IUUC-Tca-121506	Theobroma cacao	36.42	9.00e-149	521.00
IUUC-Tre-122166	Trichoderma reesei	29.85	3.00e-104	373.00
IUUC-Tvi-122385	Trichoderma virens	30.06	3.00e-104	373.00
IUUC-Tae-122836	Triticum aestivum	36.00	1.00e-154	540.00
IUUC-Tur-126490	Triticum urartu	33.00	2.00e-115	410.00
IUUC-Tme-127157	Tuber melanosporum	33.00	2.00e-114	407.00
IUUC-Tbe-127981	Tupaia belangeri	83.53	0.00e+00	1401.00
IUUC-Ttr-128886	Tursiops truncatus	88.65	0.00e+00	1683.00
IUUC-Uma-129439	Ustilago maydis	32.30	1.00e-102	368.00
IUUC-Vda-129760	Verticillium dahliae	29.81	9.00e-103	368.00
IUUC-Vpa-130456	Vicugna pacos	90.23	0.00e+00	1707.00
IUUC-Vvi-131086	Vitis vinifera	35.45	3.00e-151	529.00
IUUC-Xtr-131829	Xenopus tropicalis	68.16	0.00e+00	1228.00
IUUC-Xma-133588	Xiphophorus maculatus	56.84	0.00e+00	954.00
IUUC-Yli-134328	Yarrowia lipolytica	31.35	1.00e-109	390.00
IUUC-Zma-135808	Zea mays	36.12	8.00e-152	531.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence