iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076451

Ensembl Protein ID

OB06G30260.1

UniProt Accession

J3MG82; J3MG82_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB06G30260	OB06G30260.1	OB06G30260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-30	103.8	556	587
UBD/Beta-Prp	3.60e-66	224.0	93	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd+vt+l+f  d + l+s+s Dgt+++WD+
   Q: 556  GHTDRVTDLCFsEDgKWLISSSMDGTLRIWDI 587
           8**********955699**************5 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           h+++v        ++++++++   g + +w+++        +  +s  ++++ ++ ++pd+     + gse + +++w++st k ++ +kg ++sv+
   Q: 93   HEEKVNMLYL---FGEYILSADIEGNVFIWSFRGAEPnsepVGNISLGDKFTPTCIMHPDTYlnKVIIGSEEGPLQLWNISTKKKLYEFKGWNSSVC 186
           4444444444...59*****************9977699999***999999*9999***9866789******************************* PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           s+ +sp  d++++G +d ti+v +++ +++l +++ + +g+v+ +++  dg  ll+sG+  +++ lW+l+  +l    +++h+ s+ sl f  n + 
   Q: 187  SCVSSPALDVIAVGCSDGTIHVHNIRYDEELMSFNHQIRGAVTALSFRTDGqPLLASGGSSGVISLWNLEKRRLHSVIREAHDASIVSLHFFANEPI 283
           ************************************************************************************************* PP
   S: 195  lvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           l+s + d+++k+w +       + +r   gh+++++++rf  n++ ++s+++D+  r++ + +++  + l++++
   Q: 284  LMSSASDNSIKMWIFDtndgDARLLRFRSGHSAPPRCIRFYGNGKCILSAGQDRAFRLFSVVQDQQSRELSQRH 357
           *************9996655555699999******************************888888888888877 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MGIFEPFRAI GYITAGGVPF SVQRLGTETF VTVSVGKAFH VYNCAKLNLV LCGPQLPKKI 60
RALASYKDYT FAAYGSDIAV FKRTDQVVTW SRHEEKVNML YLFGEYILSA DIEGNVFIWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCCCTT GCGGTGGGTG GGAGAGGGAG GGAGATGGGG ATCTTCGAGC CGTTCCGCGC 60
CATCGGGTAC ATCACGGCGG GCGGCGTGCC CTTCTCCGTG CAGCGCCTCG GCACCGAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

obr:102711984

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	87.46	0.00e+00	1543.00
IUUC-Aml-002289	Ailuropoda melanoleuca	36.17	3.00e-150	525.00
IUUC-Atr-002859	Amborella trichopoda	66.94	0.00e+00	1117.00
IUUC-Apl-003505	Anas platyrhynchos	38.96	2.00e-142	499.00
IUUC-Aca-004339	Anolis carolinensis	36.00	3.00e-149	521.00
IUUC-Aly-005913	Arabidopsis lyrata	70.61	0.00e+00	1272.00
IUUC-Ath-006767	Arabidopsis thaliana	70.03	0.00e+00	1261.00
IUUC-Ago-007763	Ashbya gossypii	29.30	1.00e-111	397.00
IUUC-Acl-008275	Aspergillus clavatus	30.27	3.00e-84	305.00
IUUC-Afl-008457	Aspergillus flavus	30.63	5.00e-78	284.00
IUUC-Afu-008914	Aspergillus fumigatus	29.36	2.00e-86	312.00
IUUC-Ani-009225	Aspergillus nidulans	31.43	6.00e-93	334.00
IUUC-Aor-010046	Aspergillus oryzae	29.53	8.00e-104	370.00
IUUC-Ate-010337	Aspergillus terreus	28.10	5.00e-100	358.00
IUUC-Ame-010963	Astyanax mexicanus	35.64	1.00e-142	499.00
IUUC-Bgr-011973	Blumeria graminis	29.01	2.00e-104	372.00
IUUC-Bta-012462	Bos taurus	36.07	1.00e-147	516.00
IUUC-Bci-013940	Botrytis cinerea	30.64	7.00e-121	427.00
IUUC-Bdi-014725	Brachypodium distachyon	88.29	0.00e+00	1598.00
IUUC-Bol-016534	Brassica oleracea	70.18	0.00e+00	1266.00
IUUC-Bra-016781	Brassica rapa	68.09	0.00e+00	1253.00
IUUC-Cel-018581	Caenorhabditis elegans	27.49	2.00e-81	296.00
IUUC-Cja-019675	Callithrix jacchus	35.60	4.00e-157	547.00
IUUC-Cfa-020118	Canis familiaris	36.32	6.00e-150	523.00
IUUC-Cpo-021798	Cavia porcellus	36.38	1.00e-147	516.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	30.25	2.00e-37	149.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.79	5.00e-148	517.00
IUUC-Cho-024518	Choloepus hoffmanni	31.91	3.00e-102	365.00
IUUC-Cin-025339	Ciona intestinalis	35.45	1.00e-150	526.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.13	2.00e-101	363.00
IUUC-Cne-026859	Cryptococcus neoformans	34.54	3.00e-134	471.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.40	1.00e-76	280.00
IUUC-Dre-027733	Danio rerio	34.92	5.00e-140	491.00
IUUC-Dno-029439	Dasypus novemcinctus	36.04	5.00e-145	507.00
IUUC-Dor-030329	Dipodomys ordii	33.76	1.00e-62	233.00
IUUC-Dse-031511	Dothistroma septosporum	29.02	2.00e-97	349.00
IUUC-Dme-031694	Drosophila melanogaster	32.90	3.00e-128	452.00
IUUC-Ete-032930	Echinops telfairi	39.69	3.00e-111	395.00
IUUC-Eca-033302	Equus caballus	36.14	3.00e-147	515.00
IUUC-Eeu-034516	Erinaceus europaeus	36.19	4.00e-156	544.00
IUUC-Fca-036064	Felis catus	36.04	1.00e-146	513.00
IUUC-Fal-037024	Ficedula albicollis	36.12	6.00e-152	530.00
IUUC-Fox-037787	Fusarium oxysporum	29.74	9.00e-96	344.00
IUUC-Fso-038378	Fusarium solani	30.03	3.00e-100	358.00
IUUC-Gmo-039637	Gadus morhua	36.22	3.00e-80	291.00
IUUC-Ggr-040108	Gaeumannomyces graminis	30.14	2.00e-95	343.00
IUUC-Gga-040982	Gallus gallus	36.29	8.00e-161	560.00
IUUC-Gac-041565	Gasterosteus aculeatus	36.11	1.00e-136	479.00
IUUC-Gma-043414	Glycine max	71.48	0.00e+00	1288.00
IUUC-Ggo-045463	Gorilla gorilla	35.52	9.00e-148	516.00
IUUC-Hsa-045675	Homo sapiens	35.60	1.00e-149	523.00
IUUC-Hvu-047352	Hordeum vulgare	87.52	0.00e+00	1426.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.45	2.00e-157	548.00
IUUC-Kpa-049164	Komagataella pastoris	31.78	9.00e-116	410.00
IUUC-Lch-050476	Latimeria chalumnae	35.22	2.00e-152	532.00
IUUC-Lpe-051556	Leersia perrieri	74.28	0.00e+00	1275.00
IUUC-Loc-052820	Lepisosteus oculatus	36.29	2.00e-153	535.00
IUUC-Lma-052961	Leptosphaeria maculans	30.78	1.00e-93	337.00
IUUC-Laf-054006	Loxodonta africana	34.61	2.00e-138	485.00
IUUC-Mcc-055037	Macaca mulatta	35.38	2.00e-148	519.00
IUUC-Mor-057280	Magnaporthe oryzae	28.60	8.00e-95	340.00
IUUC-Mpo-057408	Magnaporthe poae	29.31	1.00e-91	330.00
IUUC-Mtr-058473	Medicago truncatula	71.79	0.00e+00	1310.00
IUUC-Mla-058892	Melampsora laricipopulina	34.03	1.00e-113	403.00
IUUC-Mga-059598	Meleagris gallopavo	32.02	3.00e-113	402.00
IUUC-Mvi-060334	Microbotryum violaceum	33.72	5.00e-113	401.00
IUUC-Mmr-061239	Microcebus murinus	35.86	7.00e-147	513.00
IUUC-Mdo-062471	Monodelphis domestica	37.12	1.00e-145	509.00
IUUC-Mmu-063872	Mus musculus	36.11	3.00e-156	545.00
IUUC-Mac-064631	Musa acuminata	75.67	0.00e+00	1250.00
IUUC-Mpu-066039	Mustela putorius furo	36.47	8.00e-161	560.00
IUUC-Mlu-067485	Myotis lucifugus	36.14	4.00e-146	511.00
IUUC-Nfi-068319	Neosartorya fischeri	29.32	2.00e-97	350.00
IUUC-Ncr-068725	Neurospora crassa	28.54	7.00e-99	354.00
IUUC-Nle-069050	Nomascus leucogenys	35.60	3.00e-149	521.00
IUUC-Opr-070437	Ochotona princeps	42.65	2.00e-46	179.00
IUUC-Ont-071574	Oreochromis niloticus	35.97	2.00e-146	512.00
IUUC-Oan-072826	Ornithorhynchus anatinus	37.93	1.00e-159	555.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.44	5.00e-142	497.00
IUUC-Oba-075407	Oryza barthii	85.84	0.00e+00	1506.00
IUUC-Ogl-077535	Oryza glaberrima	94.39	0.00e+00	1694.00
IUUC-Ogu-077995	Oryza glumaepatula	84.66	0.00e+00	1518.00
IUUC-Oin-079431	Oryza indica	94.91	0.00e+00	1697.00
IUUC-Olo-080495	Oryza longistaminata	84.14	0.00e+00	1477.00
IUUC-Oni-082336	Oryza nivara	90.49	0.00e+00	1587.00
IUUC-Opu-084028	Oryza punctata	86.45	0.00e+00	1447.00
IUUC-Oru-084500	Oryza rufipogon	84.53	0.00e+00	1497.00
IUUC-Osa-086242	Oryza sativa	94.91	0.00e+00	1696.00
IUUC-Ola-086612	Oryzias latipes	36.77	1.00e-117	416.00
IUUC-Olu-087703	Ostreococcus lucimarinus	36.38	4.00e-154	538.00
IUUC-Oga-088572	Otolemur garnettii	35.85	1.00e-147	516.00
IUUC-Oar-090363	Ovis aries	36.58	6.00e-151	527.00
IUUC-Ptr-090477	Pan troglodytes	35.38	2.00e-147	515.00
IUUC-Pan-092914	Papio anubis	35.38	1.00e-148	519.00
IUUC-Psi-093019	Pelodiscus sinensis	34.99	2.00e-144	505.00
IUUC-Pma-094303	Petromyzon marinus	33.98	3.00e-122	432.00
IUUC-Pno-094938	Phaeosphaeria nodorum	29.36	1.00e-86	313.00
IUUC-Ppa-095720	Physcomitrella patens	53.25	0.00e+00	968.00
IUUC-Pfo-097034	Poecilia formosa	35.20	7.00e-136	477.00
IUUC-Pab-097669	Pongo abelii	35.60	4.00e-150	524.00
IUUC-Pop-098835	Populus trichocarpa	73.00	0.00e+00	1316.00
IUUC-Pca-101097	Procavia capensis	38.61	8.00e-61	228.00
IUUC-Ppe-101430	Prunus persica	74.04	0.00e+00	1363.00
IUUC-Pva-103152	Pteropus vampyrus	36.47	2.00e-152	531.00
IUUC-Pgr-103517	Puccinia graminis	30.35	3.00e-126	445.00
IUUC-Ptt-103697	Puccinia triticina	31.61	1.00e-98	353.00
IUUC-Pte-104121	Pyrenophora teres	29.59	2.00e-95	343.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	29.63	8.00e-96	344.00
IUUC-Rno-105435	Rattus norvegicus	36.00	2.00e-152	531.00
IUUC-Sce-106202	Saccharomyces cerevisiae	30.17	3.00e-101	362.00
IUUC-Sha-107272	Sarcophilus harrisii	37.59	1.00e-141	496.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.58	1.00e-149	522.00
IUUC-Spo-108256	Schizosaccharomyces pombe	36.17	5.00e-154	537.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.91	1.00e-113	403.00
IUUC-Smo-108762	Selaginella moellendorffii	54.89	0.00e+00	988.00
IUUC-Sit-110051	Setaria italica	88.18	0.00e+00	1602.00
IUUC-Sly-111181	Solanum lycopersicum	70.47	0.00e+00	1263.00
IUUC-Stu-112018	Solanum tuberosum	70.85	0.00e+00	1273.00
IUUC-Sar-113348	Sorex araneus	34.72	8.00e-101	360.00
IUUC-Sbi-114282	Sorghum bicolor	86.84	0.00e+00	1625.00
IUUC-Sre-114946	Sporisorium reilianum	29.96	1.00e-82	300.00
IUUC-Ssc-115287	Sus scrofa	36.43	9.00e-152	530.00
IUUC-Tgu-117138	Taeniopygia guttata	34.49	8.00e-124	437.00
IUUC-Tru-118232	Takifugu rubripes	35.94	9.00e-143	500.00
IUUC-Tsy-119502	Tarsius syrichta	29.42	3.00e-100	359.00
IUUC-Tni-120378	Tetraodon nigroviridis	38.45	8.00e-144	503.00
IUUC-Tca-121506	Theobroma cacao	73.11	0.00e+00	1303.00
IUUC-Tre-122166	Trichoderma reesei	30.18	8.00e-110	390.00
IUUC-Tvi-122385	Trichoderma virens	30.15	4.00e-111	395.00
IUUC-Tae-122836	Triticum aestivum	87.54	0.00e+00	1631.00
IUUC-Tur-126490	Triticum urartu	74.86	0.00e+00	1298.00
IUUC-Tme-127157	Tuber melanosporum	31.72	4.00e-112	398.00
IUUC-Tbe-127981	Tupaia belangeri	38.72	1.00e-131	463.00
IUUC-Ttr-128886	Tursiops truncatus	35.68	3.00e-146	511.00
IUUC-Uma-129439	Ustilago maydis	30.91	4.00e-89	322.00
IUUC-Vda-129760	Verticillium dahliae	29.61	4.00e-105	375.00
IUUC-Vpa-130456	Vicugna pacos	35.86	5.00e-148	517.00
IUUC-Vvi-131086	Vitis vinifera	73.06	0.00e+00	1352.00
IUUC-Xtr-131829	Xenopus tropicalis	36.91	5.00e-163	567.00
IUUC-Xma-133588	Xiphophorus maculatus	33.99	1.00e-131	462.00
IUUC-Yli-134328	Yarrowia lipolytica	30.92	3.00e-100	358.00
IUUC-Zma-135808	Zea mays	85.34	0.00e+00	1598.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence