iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	92.91	0.00e+00	1186.00	IUUC-Hsa-045749

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSPVFPMLTV LTMFYYMCLR RRARTATRGD MMSSHRTIVS NSRTSPLNAE VVQYAKEVVD 60
FSSHYGSENS MSYTMWNLAG VPNVFPSSGD FTQTAVFRTY GTWWDQCPSA SLPFRRTPSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCAGCAGC ACGGGATACT GGGAGCAGCC TCCTGCTGCC CACGCTGCGG GCTTGTGGCG 60
AAGCTCTGCT CGCCCAGTCC CGGACCCTGC AGGGTACGGC GCTTTCTTCC TTCCTCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0005758--C:mitochondrial intermembrane space
GO:0016607--C:nuclear speck

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001706	Ailuropoda melanoleuca	92.59	0.00e+00	1179.00
IUUC-Apl-004115	Anas platyrhynchos	85.02	0.00e+00	1087.00
IUUC-Aca-004482	Anolis carolinensis	80.68	0.00e+00	1013.00
IUUC-Ame-010656	Astyanax mexicanus	64.85	0.00e+00	805.00
IUUC-Bta-013498	Bos taurus	77.01	0.00e+00	934.00
IUUC-Cja-019838	Callithrix jacchus	93.40	0.00e+00	1187.00
IUUC-Cfa-020456	Canis familiaris	92.75	0.00e+00	1185.00
IUUC-Csa-024014	Chlorocebus sabaeus	93.24	0.00e+00	1186.00
IUUC-Cho-024333	Choloepus hoffmanni	94.47	3.00e-138	485.00
IUUC-Cin-025800	Ciona intestinalis	41.90	2.00e-121	429.00
IUUC-Csv-026119	Ciona savignyi	40.14	1.00e-117	416.00
IUUC-Dre-027364	Danio rerio	67.63	0.00e+00	874.00
IUUC-Dno-029258	Dasypus novemcinctus	91.63	0.00e+00	1138.00
IUUC-Dor-030963	Dipodomys ordii	80.52	0.00e+00	945.00
IUUC-Dme-031781	Drosophila melanogaster	33.05	1.00e-72	267.00
IUUC-Ete-032619	Echinops telfairi	84.77	0.00e+00	738.00
IUUC-Eca-033869	Equus caballus	92.43	0.00e+00	1179.00
IUUC-Eeu-034752	Erinaceus europaeus	83.65	0.00e+00	631.00
IUUC-Fca-036554	Felis catus	92.75	0.00e+00	1184.00
IUUC-Fal-036695	Ficedula albicollis	84.38	0.00e+00	1071.00
IUUC-Gmo-039192	Gadus morhua	67.73	0.00e+00	833.00
IUUC-Gga-040713	Gallus gallus	84.22	0.00e+00	1078.00
IUUC-Gac-041952	Gasterosteus aculeatus	69.23	0.00e+00	850.00
IUUC-Ggo-044425	Gorilla gorilla	93.72	0.00e+00	1194.00
IUUC-Hsa-045749	Homo sapiens	92.91	0.00e+00	1185.00
IUUC-Itr-047877	Ictidomys tridecemlineatus	92.64	0.00e+00	673.00
IUUC-Lch-049424	Latimeria chalumnae	75.52	0.00e+00	983.00
IUUC-Loc-052577	Lepisosteus oculatus	72.10	0.00e+00	899.00
IUUC-Laf-054305	Loxodonta africana	93.25	0.00e+00	1147.00
IUUC-Mcc-055258	Macaca mulatta	84.86	0.00e+00	1054.00
IUUC-Meu-056888	Macropus eugenii	87.56	0.00e+00	823.00
IUUC-Mga-059700	Meleagris gallopavo	84.06	0.00e+00	1089.00
IUUC-Mmr-061712	Microcebus murinus	90.98	0.00e+00	1138.00
IUUC-Mdo-062098	Monodelphis domestica	87.28	0.00e+00	1122.00
IUUC-Mmu-063505	Mus musculus	97.58	0.00e+00	1236.00
IUUC-Mpu-066263	Mustela putorius furo	92.43	0.00e+00	1182.00
IUUC-Mlu-067327	Myotis lucifugus	91.16	0.00e+00	1116.00
IUUC-Nle-069478	Nomascus leucogenys	93.35	0.00e+00	1097.00
IUUC-Opr-070497	Ochotona princeps	93.53	1.00e-89	323.00
IUUC-Ont-071391	Oreochromis niloticus	68.23	0.00e+00	837.00
IUUC-Oan-073721	Ornithorhynchus anatinus	79.48	0.00e+00	986.00
IUUC-Ocu-073821	Oryctolagus cuniculus	92.11	0.00e+00	1172.00
IUUC-Ola-087182	Oryzias latipes	68.32	0.00e+00	856.00
IUUC-Oga-088018	Otolemur garnettii	91.16	0.00e+00	1155.00
IUUC-Oar-090339	Ovis aries	92.11	0.00e+00	1143.00
IUUC-Ptr-090776	Pan troglodytes	92.91	0.00e+00	1184.00
IUUC-Pan-092203	Papio anubis	93.24	0.00e+00	1186.00
IUUC-Psi-093022	Pelodiscus sinensis	83.74	0.00e+00	1070.00
IUUC-Pfo-097500	Poecilia formosa	67.42	0.00e+00	852.00
IUUC-Pab-097943	Pongo abelii	93.08	0.00e+00	1184.00
IUUC-Pca-100898	Procavia capensis	91.79	0.00e+00	1118.00
IUUC-Pva-102663	Pteropus vampyrus	91.63	0.00e+00	1177.00
IUUC-Sha-106688	Sarcophilus harrisii	87.12	0.00e+00	1121.00
IUUC-Sar-113608	Sorex araneus	91.34	0.00e+00	682.00
IUUC-Ssc-115444	Sus scrofa	92.43	0.00e+00	1181.00
IUUC-Tgu-117129	Taeniopygia guttata	88.66	1.00e-179	621.00
IUUC-Tru-118101	Takifugu rubripes	67.58	0.00e+00	810.00
IUUC-Tsy-119589	Tarsius syrichta	92.43	0.00e+00	1170.00
IUUC-Tni-120420	Tetraodon nigroviridis	66.88	0.00e+00	834.00
IUUC-Tbe-128069	Tupaia belangeri	94.86	2.00e-138	485.00
IUUC-Ttr-128566	Tursiops truncatus	82.77	0.00e+00	1026.00
IUUC-Vpa-130059	Vicugna pacos	92.11	0.00e+00	1178.00
IUUC-Xtr-132488	Xenopus tropicalis	68.06	0.00e+00	805.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence