iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-106709

Ensembl Protein ID

ENSSHAP00000012802.1

UniProt Accession

G3WBJ7; G3WBJ7_SARHA

Genbank Protein ID

ENSSHAP00000012802

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01170588

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010955.1	ENSSHAT00000012907.1	ENSSHAP00000012802.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-30	103.8	330	367
UBD/Beta-Prp	2.50e-46	158.4	279	448

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f   +t ++s+++D  +k+WD+ tg ++
   Q: 330  GHSKAVRDICFngVGTQFLSAAYDRYLKLWDTETGQCI 367
           8**********65339*******************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++   + cl+ t+ gh+++v+ +++++ g  + s+++Dr ++lWd +tg++
   Q: 279  KQIHVWSGHTKGVSAVRLFPlSGHLLLSCSMDCKIKLWEVYGdRRCLR-TFVGHSKAVRDICFNGVGTQFLSAAYDRYLKLWDTETGQC 366
           899*****************999****************975156776.**************************************** PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..d 250
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  d
   Q: 367  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWewD 448
           ****8..588889***999988889*******************************************************9444 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSAAIAALAA SYGSGSGSES DSDNESGRCS LPAADSLIHL TKAPSAKLSL VGTVDAAPEV 60
AVKEDVETGV HLDPAIKEVQ YNPSYETMFA PEFGPENPFR TQQMAAPRNM LSGYAEPTHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNGGA GCCCCCCCCC CCCCCCCCCC CCACCCCGCC CCCTAACTAG 60
AGCGCGCGGA GCTCTACAAA CGGGAGAGAG AAAAAGGAGC GTGAAATAGG GGGACTAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

shr:100920217

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	49.42	2.00e-142	498.00
IUUC-Aml-002243	Ailuropoda melanoleuca	94.76	0.00e+00	791.00
IUUC-Atr-002502	Amborella trichopoda	50.57	5.00e-152	531.00
IUUC-Apl-003885	Anas platyrhynchos	95.03	0.00e+00	1025.00
IUUC-Aca-004854	Anolis carolinensis	70.26	0.00e+00	751.00
IUUC-Aly-006158	Arabidopsis lyrata	50.75	2.00e-153	535.00
IUUC-Ath-007474	Arabidopsis thaliana	51.69	4.00e-154	538.00
IUUC-Ago-007726	Ashbya gossypii	37.08	4.00e-70	258.00
IUUC-Acl-008220	Aspergillus clavatus	43.93	3.00e-133	468.00
IUUC-Afl-008473	Aspergillus flavus	43.63	7.00e-131	460.00
IUUC-Afu-008773	Aspergillus fumigatus	43.86	8.00e-132	463.00
IUUC-Ani-009323	Aspergillus nidulans	43.62	2.00e-118	419.00
IUUC-Ang-009851	Aspergillus niger	43.87	1.00e-131	463.00
IUUC-Aor-009950	Aspergillus oryzae	43.63	7.00e-131	460.00
IUUC-Ate-010372	Aspergillus terreus	44.98	3.00e-133	468.00
IUUC-Ame-011660	Astyanax mexicanus	84.46	0.00e+00	974.00
IUUC-Bgr-012230	Blumeria graminis	44.64	4.00e-125	441.00
IUUC-Bta-012568	Bos taurus	96.01	0.00e+00	1070.00
IUUC-Bci-013646	Botrytis cinerea	44.81	4.00e-123	434.00
IUUC-Bdi-014199	Brachypodium distachyon	49.90	1.00e-143	502.00
IUUC-Bol-015695	Brassica oleracea	51.41	4.00e-160	557.00
IUUC-Bra-017923	Brassica rapa	51.70	3.00e-160	558.00
IUUC-Cel-018535	Caenorhabditis elegans	51.36	5.00e-177	613.00
IUUC-Cja-019071	Callithrix jacchus	95.65	0.00e+00	1067.00
IUUC-Cfa-020559	Canis familiaris	95.83	0.00e+00	1068.00
IUUC-Cpo-022356	Cavia porcellus	95.47	0.00e+00	1066.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.02	5.00e-77	280.00
IUUC-Csa-023125	Chlorocebus sabaeus	96.01	0.00e+00	1071.00
IUUC-Cho-024676	Choloepus hoffmanni	88.95	0.00e+00	941.00
IUUC-Cin-025229	Ciona intestinalis	70.04	0.00e+00	763.00
IUUC-Csv-025868	Ciona savignyi	70.53	2.00e-40	155.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.23	2.00e-107	382.00
IUUC-Cne-026885	Cryptococcus neoformans	51.93	2.00e-152	532.00
IUUC-Dre-027631	Danio rerio	84.07	0.00e+00	981.00
IUUC-Dno-029815	Dasypus novemcinctus	86.00	0.00e+00	984.00
IUUC-Dor-031143	Dipodomys ordii	81.16	0.00e+00	890.00
IUUC-Dse-031520	Dothistroma septosporum	45.81	7.00e-96	344.00
IUUC-Dme-032050	Drosophila melanogaster	62.18	0.00e+00	744.00
IUUC-Ete-032866	Echinops telfairi	94.38	0.00e+00	1044.00
IUUC-Eca-033384	Equus caballus	96.01	0.00e+00	1068.00
IUUC-Eeu-034471	Erinaceus europaeus	81.34	0.00e+00	831.00
IUUC-Fca-035727	Felis catus	96.01	0.00e+00	1072.00
IUUC-Fal-036774	Ficedula albicollis	95.59	0.00e+00	1035.00
IUUC-Fox-037951	Fusarium oxysporum	44.08	3.00e-126	444.00
IUUC-Fso-038287	Fusarium solani	46.20	2.00e-123	435.00
IUUC-Gmo-039670	Gadus morhua	81.14	0.00e+00	945.00
IUUC-Ggr-039764	Gaeumannomyces graminis	40.07	5.00e-115	407.00
IUUC-Gga-040293	Gallus gallus	95.94	0.00e+00	1036.00
IUUC-Gac-042159	Gasterosteus aculeatus	83.39	0.00e+00	975.00
IUUC-Gma-044299	Glycine max	50.19	7.00e-145	507.00
IUUC-Ggo-044864	Gorilla gorilla	95.65	0.00e+00	1068.00
IUUC-Hsa-046602	Homo sapiens	95.65	0.00e+00	1068.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	97.85	0.00e+00	811.00
IUUC-Kpa-049318	Komagataella pastoris	45.30	6.00e-96	344.00
IUUC-Lch-049796	Latimeria chalumnae	74.36	0.00e+00	837.00
IUUC-Lpe-051153	Leersia perrieri	50.76	4.00e-146	511.00
IUUC-Loc-052467	Lepisosteus oculatus	86.26	0.00e+00	990.00
IUUC-Lma-053107	Leptosphaeria maculans	48.65	4.00e-113	401.00
IUUC-Laf-053787	Loxodonta africana	96.03	0.00e+00	1100.00
IUUC-Mcc-055706	Macaca mulatta	96.01	0.00e+00	1071.00
IUUC-Meu-056757	Macropus eugenii	82.13	0.00e+00	642.00
IUUC-Mor-057079	Magnaporthe oryzae	38.20	1.00e-113	402.00
IUUC-Mpo-057533	Magnaporthe poae	47.07	7.00e-111	394.00
IUUC-Mtr-057950	Medicago truncatula	46.74	2.00e-147	516.00
IUUC-Mla-058910	Melampsora laricipopulina	46.52	3.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	95.38	0.00e+00	1033.00
IUUC-Mvi-060349	Microbotryum violaceum	58.69	1.00e-135	476.00
IUUC-Mmr-061209	Microcebus murinus	96.20	0.00e+00	1104.00
IUUC-Mdo-062118	Monodelphis domestica	99.64	0.00e+00	1171.00
IUUC-Mmu-063173	Mus musculus	96.20	0.00e+00	1073.00
IUUC-Mac-065080	Musa acuminata	51.47	6.00e-152	530.00
IUUC-Mpu-066659	Mustela putorius furo	95.83	0.00e+00	1070.00
IUUC-Mlu-067029	Myotis lucifugus	95.83	0.00e+00	1046.00
IUUC-Nfi-068334	Neosartorya fischeri	45.23	6.00e-133	467.00
IUUC-Ncr-068675	Neurospora crassa	38.75	7.00e-103	367.00
IUUC-Nle-070113	Nomascus leucogenys	95.29	0.00e+00	1067.00
IUUC-Opr-070685	Ochotona princeps	87.68	0.00e+00	1014.00
IUUC-Ont-071680	Oreochromis niloticus	83.88	0.00e+00	976.00
IUUC-Oan-073573	Ornithorhynchus anatinus	97.71	0.00e+00	971.00
IUUC-Ocu-074074	Oryctolagus cuniculus	95.83	0.00e+00	1099.00
IUUC-Oba-075625	Oryza barthii	51.24	7.00e-146	510.00
IUUC-Obr-076510	Oryza brachyantha	50.76	4.00e-146	511.00
IUUC-Ogl-077275	Oryza glaberrima	51.24	7.00e-146	510.00
IUUC-Ogu-078563	Oryza glumaepatula	51.24	8.00e-146	510.00
IUUC-Oin-079898	Oryza indica	63.45	5.00e-134	471.00
IUUC-Olo-081080	Oryza longistaminata	51.61	1.00e-140	493.00
IUUC-Oni-083121	Oryza nivara	51.24	6.00e-146	510.00
IUUC-Opu-083329	Oryza punctata	50.57	2.00e-145	508.00
IUUC-Oru-084807	Oryza rufipogon	50.73	1.00e-127	449.00
IUUC-Osa-086039	Oryza sativa	51.33	2.00e-146	512.00
IUUC-Ola-087149	Oryzias latipes	83.36	0.00e+00	969.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.74	4.00e-122	431.00
IUUC-Oga-088359	Otolemur garnettii	96.01	0.00e+00	1071.00
IUUC-Oar-089390	Ovis aries	96.01	0.00e+00	1068.00
IUUC-Ptr-090894	Pan troglodytes	95.65	0.00e+00	1068.00
IUUC-Pan-092476	Papio anubis	96.01	0.00e+00	1071.00
IUUC-Psi-093527	Pelodiscus sinensis	93.91	0.00e+00	994.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.76	1.00e-112	399.00
IUUC-Ppa-095386	Physcomitrella patens	49.91	2.00e-153	535.00
IUUC-Pfo-096139	Poecilia formosa	85.16	0.00e+00	984.00
IUUC-Pab-097838	Pongo abelii	95.33	0.00e+00	945.00
IUUC-Pop-098945	Populus trichocarpa	51.13	1.00e-151	529.00
IUUC-Pca-100876	Procavia capensis	80.98	0.00e+00	917.00
IUUC-Ppe-101777	Prunus persica	50.47	9.00e-150	523.00
IUUC-Pva-102418	Pteropus vampyrus	95.47	0.00e+00	1067.00
IUUC-Pgr-103456	Puccinia graminis	50.74	7.00e-159	553.00
IUUC-Ptt-103731	Puccinia triticina	46.75	7.00e-145	507.00
IUUC-Pte-104386	Pyrenophora teres	50.37	1.00e-114	405.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	51.36	1.00e-114	406.00
IUUC-Rno-105694	Rattus norvegicus	91.49	0.00e+00	999.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.89	5.00e-75	275.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	41.07	2.00e-124	439.00
IUUC-Spo-108331	Schizosaccharomyces pombe	41.98	2.00e-122	432.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	46.17	1.00e-116	413.00
IUUC-Smo-109326	Selaginella moellendorffii	44.92	4.00e-126	444.00
IUUC-Sit-110446	Setaria italica	49.90	5.00e-144	504.00
IUUC-Sly-111330	Solanum lycopersicum	50.19	7.00e-150	523.00
IUUC-Stu-112610	Solanum tuberosum	49.91	2.00e-149	522.00
IUUC-Sar-113065	Sorex araneus	76.00	6.00e-124	437.00
IUUC-Sbi-114005	Sorghum bicolor	49.71	2.00e-142	498.00
IUUC-Sre-114988	Sporisorium reilianum	50.00	6.00e-157	547.00
IUUC-Ssc-115760	Sus scrofa	96.38	0.00e+00	1076.00
IUUC-Tgu-116493	Taeniopygia guttata	96.13	0.00e+00	1043.00
IUUC-Tru-118489	Takifugu rubripes	81.32	0.00e+00	949.00
IUUC-Tsy-119332	Tarsius syrichta	96.20	0.00e+00	1103.00
IUUC-Tni-120202	Tetraodon nigroviridis	77.60	0.00e+00	878.00
IUUC-Tca-121429	Theobroma cacao	48.32	2.00e-149	522.00
IUUC-Tre-122162	Trichoderma reesei	42.86	3.00e-123	435.00
IUUC-Tvi-122500	Trichoderma virens	43.91	1.00e-120	426.00
IUUC-Tae-125557	Triticum aestivum	49.13	5.00e-142	497.00
IUUC-Tur-126554	Triticum urartu	49.03	4.00e-140	491.00
IUUC-Tme-126919	Tuber melanosporum	45.66	3.00e-138	485.00
IUUC-Tbe-127968	Tupaia belangeri	91.12	0.00e+00	1030.00
IUUC-Ttr-129215	Tursiops truncatus	95.65	0.00e+00	1063.00
IUUC-Uma-129622	Ustilago maydis	49.37	2.00e-158	552.00
IUUC-Vda-129750	Verticillium dahliae	44.64	1.00e-124	440.00
IUUC-Vpa-130617	Vicugna pacos	94.19	0.00e+00	969.00
IUUC-Vvi-131238	Vitis vinifera	61.81	5.00e-134	471.00
IUUC-Xtr-131865	Xenopus tropicalis	89.15	0.00e+00	1008.00
IUUC-Xma-133627	Xiphophorus maculatus	85.35	0.00e+00	986.00
IUUC-Yli-134390	Yarrowia lipolytica	45.34	4.00e-115	407.00
IUUC-Zma-135925	Zea mays	50.48	2.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence