iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114685

Ensembl Protein ID

Sb04g037240.1

UniProt Accession

A0A194YT48; A0A194YT48_SORBI

Genbank Protein ID

KXG31356.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G345400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g037240	Sb04g037240.1	Sb04g037240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-19	68.7	143	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++svt+la+ ++  +l++ s Dg+++v++
   Q: 143  HESSVTSLAWhPNnIYLATTSTDGKCRVFS 172
           9**********763559***********97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAAIHQFA ECITCHAWSP DQSMIAFCPN NHEVHIYKFF TDKWEKLHVL SKHDQIVSGI 60
DWSKSSNKIV TVSHDRNSYV WTQEGSDWVP TLVILKLNRA ALCVQWSPKE NKFAVGSGAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTGCGCT ACACAAACAC AAGCCTAGGC CTAGAGGGTG GTGGAAGGGG AGCGTCGACC 60
AATTCGTCCC GCCCTCGCCG CGCCGCTGGC CTTGCGTGCC CCCCCCCGAT GGCGGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	68.04	1.00e-151	528.00
IUUC-Aml-001709	Ailuropoda melanoleuca	41.62	6.00e-80	290.00
IUUC-Atr-002844	Amborella trichopoda	72.69	4.00e-97	347.00
IUUC-Apl-003325	Anas platyrhynchos	42.70	2.00e-78	285.00
IUUC-Aca-004736	Anolis carolinensis	42.51	1.00e-78	286.00
IUUC-Aly-006568	Arabidopsis lyrata	68.01	1.00e-154	538.00
IUUC-Ath-006683	Arabidopsis thaliana	68.28	3.00e-155	540.00
IUUC-Ago-007966	Ashbya gossypii	34.43	2.00e-54	205.00
IUUC-Acl-008334	Aspergillus clavatus	40.11	2.00e-68	251.00
IUUC-Afl-008485	Aspergillus flavus	38.01	3.00e-62	232.00
IUUC-Afu-008780	Aspergillus fumigatus	38.38	2.00e-67	248.00
IUUC-Ani-009417	Aspergillus nidulans	38.38	3.00e-66	244.00
IUUC-Ang-009543	Aspergillus niger	38.67	1.00e-67	248.00
IUUC-Aor-010234	Aspergillus oryzae	38.52	6.00e-66	243.00
IUUC-Ate-010386	Aspergillus terreus	38.89	2.00e-67	248.00
IUUC-Ame-011852	Astyanax mexicanus	43.24	2.00e-79	288.00
IUUC-Bgr-012192	Blumeria graminis	36.36	2.00e-60	224.00
IUUC-Bta-012442	Bos taurus	40.71	7.00e-79	286.00
IUUC-Bci-013616	Botrytis cinerea	36.12	8.00e-59	219.00
IUUC-Bdi-014632	Brachypodium distachyon	86.40	0.00e+00	687.00
IUUC-Bol-015516	Brassica oleracea	70.00	5.00e-161	559.00
IUUC-Bra-016790	Brassica rapa	69.73	1.00e-160	558.00
IUUC-Cel-018122	Caenorhabditis elegans	39.66	5.00e-70	257.00
IUUC-Cja-019899	Callithrix jacchus	41.42	7.00e-80	290.00
IUUC-Cfa-020067	Canis familiaris	41.53	5.00e-80	290.00
IUUC-Cpo-022461	Cavia porcellus	42.35	5.00e-81	293.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	39.79	2.00e-39	154.00
IUUC-Csa-023277	Chlorocebus sabaeus	41.26	2.00e-78	285.00
IUUC-Cho-024449	Choloepus hoffmanni	26.05	3.00e-15	74.70
IUUC-Cin-025186	Ciona intestinalis	37.29	1.00e-61	229.00
IUUC-Csv-026275	Ciona savignyi	37.17	4.00e-63	234.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	34.67	8.00e-57	213.00
IUUC-Cne-026926	Cryptococcus neoformans	37.09	2.00e-71	262.00
IUUC-Dre-028141	Danio rerio	42.51	3.00e-81	294.00
IUUC-Dno-029092	Dasypus novemcinctus	41.82	6.00e-75	274.00
IUUC-Dor-030559	Dipodomys ordii	41.53	9.00e-81	292.00
IUUC-Dse-031574	Dothistroma septosporum	39.20	6.00e-66	243.00
IUUC-Dme-031907	Drosophila melanogaster	40.05	9.00e-71	259.00
IUUC-Ete-032299	Echinops telfairi	41.96	3.00e-81	294.00
IUUC-Eca-033593	Equus caballus	41.53	2.00e-80	291.00
IUUC-Eeu-035041	Erinaceus europaeus	29.11	1.00e-15	76.60
IUUC-Fca-036254	Felis catus	41.96	1.00e-80	292.00
IUUC-Fal-037453	Ficedula albicollis	42.59	4.00e-81	293.00
IUUC-Fox-037842	Fusarium oxysporum	36.27	5.00e-61	227.00
IUUC-Fso-038276	Fusarium solani	36.44	1.00e-60	225.00
IUUC-Gmo-039673	Gadus morhua	40.86	8.00e-74	269.00
IUUC-Ggr-039762	Gaeumannomyces graminis	35.73	6.00e-60	223.00
IUUC-Gga-040898	Gallus gallus	42.70	9.00e-82	296.00
IUUC-Gac-042531	Gasterosteus aculeatus	42.43	5.00e-75	273.00
IUUC-Gma-043868	Glycine max	73.32	5.00e-169	585.00
IUUC-Ggo-045355	Gorilla gorilla	31.06	2.00e-45	175.00
IUUC-Hsa-046623	Homo sapiens	41.53	3.00e-80	291.00
IUUC-Hvu-047456	Hordeum vulgare	79.57	4.00e-87	312.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	42.08	7.00e-82	296.00
IUUC-Kpa-049288	Komagataella pastoris	33.07	1.00e-48	186.00
IUUC-Lch-049679	Latimeria chalumnae	42.31	5.00e-80	290.00
IUUC-Lpe-050869	Leersia perrieri	82.93	0.00e+00	665.00
IUUC-Loc-052532	Lepisosteus oculatus	42.55	2.00e-78	285.00
IUUC-Lma-053109	Leptosphaeria maculans	37.37	4.00e-61	227.00
IUUC-Laf-054271	Loxodonta africana	43.05	3.00e-76	277.00
IUUC-Mcc-054857	Macaca mulatta	42.78	2.00e-75	275.00
IUUC-Meu-056302	Macropus eugenii	43.60	2.00e-82	298.00
IUUC-Mor-057167	Magnaporthe oryzae	35.22	9.00e-57	213.00
IUUC-Mtr-057659	Medicago truncatula	72.24	4.00e-166	576.00
IUUC-Mla-058886	Melampsora laricipopulina	36.48	2.00e-68	251.00
IUUC-Mga-059279	Meleagris gallopavo	42.43	1.00e-81	295.00
IUUC-Mvi-060302	Microbotryum violaceum	36.72	1.00e-66	246.00
IUUC-Mmr-060752	Microcebus murinus	41.67	9.00e-82	296.00
IUUC-Mdo-062326	Monodelphis domestica	43.32	1.00e-76	279.00
IUUC-Mmu-064099	Mus musculus	41.19	5.00e-81	293.00
IUUC-Mac-064632	Musa acuminata	77.15	2.00e-178	617.00
IUUC-Mpu-066247	Mustela putorius furo	41.96	2.00e-79	288.00
IUUC-Mlu-067571	Myotis lucifugus	42.90	2.00e-81	295.00
IUUC-Nfi-068383	Neosartorya fischeri	38.38	3.00e-67	248.00
IUUC-Ncr-068777	Neurospora crassa	36.00	6.00e-60	223.00
IUUC-Nle-069900	Nomascus leucogenys	42.78	9.00e-76	276.00
IUUC-Opr-070519	Ochotona princeps	50.44	3.00e-63	234.00
IUUC-Ont-071283	Oreochromis niloticus	41.85	2.00e-74	271.00
IUUC-Oan-072692	Ornithorhynchus anatinus	43.44	1.00e-81	295.00
IUUC-Ocu-074187	Oryctolagus cuniculus	41.71	2.00e-80	291.00
IUUC-Oba-075379	Oryza barthii	84.59	0.00e+00	665.00
IUUC-Obr-076404	Oryza brachyantha	84.00	0.00e+00	674.00
IUUC-Ogl-077409	Oryza glaberrima	81.60	0.00e+00	649.00
IUUC-Ogu-078759	Oryza glumaepatula	84.59	0.00e+00	664.00
IUUC-Oin-079118	Oryza indica	84.53	0.00e+00	675.00
IUUC-Olo-081055	Oryza longistaminata	83.75	2.00e-163	567.00
IUUC-Ome-081281	Oryza meridionalis	84.32	0.00e+00	663.00
IUUC-Oni-083043	Oryza nivara	84.59	0.00e+00	665.00
IUUC-Opu-083392	Oryza punctata	72.70	5.00e-159	552.00
IUUC-Oru-084839	Oryza rufipogon	84.59	0.00e+00	665.00
IUUC-Osa-085377	Oryza sativa	84.80	0.00e+00	676.00
IUUC-Ola-087274	Oryzias latipes	41.96	5.00e-75	273.00
IUUC-Oga-088610	Otolemur garnettii	42.08	5.00e-81	293.00
IUUC-Oar-089613	Ovis aries	42.78	1.00e-75	275.00
IUUC-Ptr-091023	Pan troglodytes	41.53	3.00e-80	291.00
IUUC-Pan-091727	Papio anubis	41.80	2.00e-81	295.00
IUUC-Psi-093767	Pelodiscus sinensis	42.43	6.00e-78	283.00
IUUC-Pma-094124	Petromyzon marinus	41.32	5.00e-81	293.00
IUUC-Pno-095031	Phaeosphaeria nodorum	36.02	1.00e-60	226.00
IUUC-Ppa-095858	Physcomitrella patens	55.67	1.00e-126	445.00
IUUC-Pfo-097107	Poecilia formosa	42.55	5.00e-75	273.00
IUUC-Pab-098238	Pongo abelii	41.73	3.00e-81	294.00
IUUC-Pop-098954	Populus trichocarpa	68.58	2.00e-109	387.00
IUUC-Pca-100580	Procavia capensis	41.78	2.00e-79	288.00
IUUC-Ppe-101681	Prunus persica	72.07	5.00e-166	575.00
IUUC-Pva-102928	Pteropus vampyrus	40.44	3.00e-74	271.00
IUUC-Pgr-103309	Puccinia graminis	39.34	4.00e-71	261.00
IUUC-Ptt-103959	Puccinia triticina	37.35	5.00e-67	247.00
IUUC-Pte-104384	Pyrenophora teres	37.60	1.00e-57	215.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	37.57	7.00e-58	216.00
IUUC-Rno-104846	Rattus norvegicus	41.80	2.00e-81	295.00
IUUC-Sce-106411	Saccharomyces cerevisiae	32.82	4.00e-48	184.00
IUUC-Sha-106691	Sarcophilus harrisii	43.32	2.00e-76	278.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	36.10	4.00e-62	231.00
IUUC-Spo-108053	Schizosaccharomyces pombe	35.39	7.00e-60	223.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	36.07	7.00e-59	219.00
IUUC-Smo-108836	Selaginella moellendorffii	60.11	4.00e-135	473.00
IUUC-Sit-110150	Setaria italica	90.11	0.00e+00	712.00
IUUC-Sly-111048	Solanum lycopersicum	69.89	4.00e-160	556.00
IUUC-Sar-113599	Sorex araneus	50.21	2.00e-61	228.00
IUUC-Sre-115090	Sporisorium reilianum	42.46	8.00e-63	233.00
IUUC-Ssc-115851	Sus scrofa	42.78	1.00e-75	276.00
IUUC-Tgu-116701	Taeniopygia guttata	42.97	2.00e-79	288.00
IUUC-Tru-117603	Takifugu rubripes	42.32	3.00e-77	281.00
IUUC-Tsy-119515	Tarsius syrichta	54.86	2.00e-42	165.00
IUUC-Tni-119844	Tetraodon nigroviridis	42.12	5.00e-74	270.00
IUUC-Tca-121645	Theobroma cacao	73.87	9.00e-168	582.00
IUUC-Tre-122045	Trichoderma reesei	35.28	2.00e-58	218.00
IUUC-Tvi-122523	Trichoderma virens	35.12	9.00e-59	219.00
IUUC-Tae-125810	Triticum aestivum	75.60	0.00e+00	647.00
IUUC-Tur-126640	Triticum urartu	79.56	4.00e-176	609.00
IUUC-Tme-127018	Tuber melanosporum	35.39	9.00e-56	209.00
IUUC-Tbe-127321	Tupaia belangeri	45.45	3.00e-71	260.00
IUUC-Ttr-128698	Tursiops truncatus	41.80	2.00e-80	291.00
IUUC-Uma-129423	Ustilago maydis	42.91	3.00e-64	238.00
IUUC-Vda-129706	Verticillium dahliae	35.75	3.00e-59	221.00
IUUC-Vvi-131647	Vitis vinifera	71.43	4.00e-164	569.00
IUUC-Xtr-131893	Xenopus tropicalis	42.16	1.00e-77	281.00
IUUC-Xma-133435	Xiphophorus maculatus	42.55	5.00e-75	273.00
IUUC-Yli-134471	Yarrowia lipolytica	34.57	2.00e-51	195.00
IUUC-Zma-135615	Zea mays	88.72	0.00e+00	715.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence