iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fca-036198

Ensembl Protein ID

ENSFCAP00000016363.2

UniProt Accession

M3WPT4; M3WPT4_FELCA

Genbank Protein ID

ENSFCAP00000016363

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02069523

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000018978.2	ENSFCAT00000018781.2	ENSFCAP00000016363.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	28.9	21	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle ++  p++lpC H++++dCl ++      + ++ rCP Cr
   Q: 21   CKICLEQLRA-PKTLPCLHTYCQDCLAQL-----AEGGHLRCPECR 60
           99******99.***************555.....4**********8 PP

Organism

Felis catus

Protein Sequence
(Fasta)

MVSQGSSPSL LEALSSDFLA CKICLEQLRA PKTLPCLHTY CQDCLAQLAE GGHLRCPECR 60
ETVPVPPAGV AAFKTNFFVN VVDLVGYRAG WYDEEARERQ AAQCPQHPGE ALRFLCQPCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCCC AGGGATCCTC ACCCTCCCTA CTGGAAGCCC TGAGCAGCGA CTTCCTGGCC 60
TGTAAAATAT GCCTGGAGCA GCTTCGGGCA CCCAAAACGT TGCCCTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	93.04	0.00e+00	984.00
IUUC-Aca-004996	Anolis carolinensis	52.30	4.00e-76	279.00
IUUC-Bta-012368	Bos taurus	86.74	0.00e+00	943.00
IUUC-Cja-019698	Callithrix jacchus	78.17	0.00e+00	1014.00
IUUC-Csa-023090	Chlorocebus sabaeus	90.18	0.00e+00	908.00
IUUC-Dno-030051	Dasypus novemcinctus	68.76	0.00e+00	803.00
IUUC-Ete-032312	Echinops telfairi	70.62	1.00e-50	192.00
IUUC-Eca-033253	Equus caballus	83.02	6.00e-44	171.00
IUUC-Eeu-034772	Erinaceus europaeus	80.31	2.00e-45	175.00
IUUC-Ggo-045486	Gorilla gorilla	89.53	0.00e+00	905.00
IUUC-Hsa-046238	Homo sapiens	89.20	0.00e+00	900.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	84.12	0.00e+00	848.00
IUUC-Laf-053640	Loxodonta africana	84.15	0.00e+00	866.00
IUUC-Mcc-055540	Macaca mulatta	90.02	0.00e+00	922.00
IUUC-Mmr-060840	Microcebus murinus	77.91	0.00e+00	964.00
IUUC-Mmu-064375	Mus musculus	78.27	0.00e+00	831.00
IUUC-Mpu-066797	Mustela putorius furo	92.01	0.00e+00	994.00
IUUC-Mlu-067996	Myotis lucifugus	89.66	0.00e+00	952.00
IUUC-Nle-069238	Nomascus leucogenys	94.49	7.00e-47	180.00
IUUC-Oga-089156	Otolemur garnettii	74.64	0.00e+00	980.00
IUUC-Oar-090056	Ovis aries	81.36	0.00e+00	847.00
IUUC-Ptr-090837	Pan troglodytes	86.65	0.00e+00	693.00
IUUC-Psi-093493	Pelodiscus sinensis	45.30	3.00e-60	226.00
IUUC-Pab-097607	Pongo abelii	89.53	0.00e+00	932.00
IUUC-Pva-102758	Pteropus vampyrus	75.66	0.00e+00	936.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence