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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Rno-136666
Ensembl Protein ID ENSRNOP00000015469.6
UniProt Accession D3ZJJ0; D3ZJJ0_RAT
Genbank Protein ID AC128116
Protein Name Family with sequence similarity 188, member B
Genbank Nucleotide ID ENSRNOP00000015469
Gene Name Fam188b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000011530.8 ENSRNOT00000015469.8 ENSRNOP00000015469.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/MIU 74.05 0.00e+00 1049.00 IUUC-Hsa-136748
DUB/MINDY 74.05 0.00e+00 1049.00 IUUC-Hsa-136748
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MDSLYVEEVA ASLVREFLSR KGLNKTFMTM DQERPRCELS INSRNDLRRV LHLEFLYKEN 60
KTKEKPLKTN LELITRYFLD HFGNTDSTES QEAPIPAIPI PKKNSKLPLR YPEATLVNIY 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-136666|DUB,MINDY;UBD,MIU|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AACCATGGGG TAGGGCGTGT TTCCCATTTT ATGTATGGAG AAATGGAACC TTTGACTGGG 60
TCAGTGACAT CCACCACAAG AAGCCAGAGT CAGTCAATTC GGCGCCCAGA ACTCATAGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-136666|DUB,MINDY;UBD,MIU|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR025257--DUF4205

Pfam

PF13898--DUF4205

SMART

SM01174--DUF4205

KEGG rno:312365
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-136380 Ailuropoda melanoleuca 73.43 0.00e+00 1115.00
IUUC-Apl-136386 Anas platyrhynchos 52.10 4.00e-176 611.00
IUUC-Aca-136390 Anolis carolinensis 69.95 1.00e-146 513.00
IUUC-Ame-136408 Astyanax mexicanus 43.72 3.00e-150 525.00
IUUC-Bta-136412 Bos taurus 71.99 0.00e+00 993.00
IUUC-Cja-136425 Callithrix jacchus 66.38 0.00e+00 717.00
IUUC-Cfa-136429 Canis familiaris 72.38 0.00e+00 1088.00
IUUC-Cpo-136433 Cavia porcellus 71.02 0.00e+00 1037.00
IUUC-Cre-136436 Chlamydomonas reinhardtii 45.88 3.00e-43 167.00
IUUC-Csa-136439 Chlorocebus sabaeus 74.05 0.00e+00 1056.00
IUUC-Cho-136443 Choloepus hoffmanni 35.92 1.00e-46 180.00
IUUC-Dre-136453 Danio rerio 42.08 3.00e-151 528.00
IUUC-Dno-136457 Dasypus novemcinctus 83.68 0.00e+00 649.00
IUUC-Dor-136462 Dipodomys ordii 70.01 0.00e+00 1003.00
IUUC-Dme-136465 Drosophila melanogaster 31.71 3.00e-30 126.00
IUUC-Ete-136468 Echinops telfairi 61.79 7.00e-85 308.00
IUUC-Eca-136472 Equus caballus 74.08 0.00e+00 1068.00
IUUC-Fca-136478 Felis catus 73.11 0.00e+00 1020.00
IUUC-Fal-136482 Ficedula albicollis 50.13 0.00e+00 668.00
IUUC-Gmo-136487 Gadus morhua 55.59 2.00e-107 383.00
IUUC-Gga-136492 Gallus gallus 50.76 0.00e+00 695.00
IUUC-Gac-136496 Gasterosteus aculeatus 59.22 1.00e-125 443.00
IUUC-Gma-136501 Glycine max 33.03 2.00e-41 164.00
IUUC-Ggo-136503 Gorilla gorilla 74.21 0.00e+00 1051.00
IUUC-Hsa-136748 Homo sapiens 74.05 0.00e+00 1099.00
IUUC-Itr-136511 Ictidomys tridecemlineatus 91.19 4.00e-86 309.00
IUUC-Lch-136514 Latimeria chalumnae 75.88 3.00e-91 327.00
IUUC-Loc-136522 Lepisosteus oculatus 47.85 0.00e+00 655.00
IUUC-Laf-136526 Loxodonta africana 35.75 1.00e-54 206.00
IUUC-Mcc-136531 Macaca mulatta 74.44 0.00e+00 1053.00
IUUC-Meu-136535 Macropus eugenii 69.82 1.00e-137 483.00
IUUC-Mtr-136540 Medicago truncatula 34.15 2.00e-42 167.00
IUUC-Mga-136544 Meleagris gallopavo 70.68 2.00e-141 496.00
IUUC-Mmr-136548 Microcebus murinus 74.08 0.00e+00 1093.00
IUUC-Mdo-136552 Monodelphis domestica 53.39 0.00e+00 719.00
IUUC-Mmu-136556 Mus musculus 91.14 0.00e+00 1306.00
IUUC-Mac-136559 Musa acuminata 33.43 2.00e-39 157.00
IUUC-Mpu-136562 Mustela putorius furo 73.30 0.00e+00 1077.00
IUUC-Mlu-136566 Myotis lucifugus 69.55 0.00e+00 975.00
IUUC-Nle-136573 Nomascus leucogenys 73.54 0.00e+00 1064.00
IUUC-Opr-136577 Ochotona princeps 65.73 0.00e+00 708.00
IUUC-Ont-136580 Oreochromis niloticus 60.11 4.00e-127 448.00
IUUC-Oan-136583 Ornithorhynchus anatinus 66.84 2.00e-147 515.00
IUUC-Ocu-136586 Oryctolagus cuniculus 70.03 0.00e+00 1008.00
IUUC-Oga-136615 Otolemur garnettii 73.43 0.00e+00 1083.00
IUUC-Oar-136620 Ovis aries 35.83 1.00e-56 213.00
IUUC-Ptr-136624 Pan troglodytes 74.05 0.00e+00 1086.00
IUUC-Pan-136628 Papio anubis 74.44 0.00e+00 1054.00
IUUC-Psi-136632 Pelodiscus sinensis 64.34 2.00e-166 579.00
IUUC-Ppa-136638 Physcomitrella patens 36.09 8.00e-42 165.00
IUUC-Pfo-136642 Poecilia formosa 53.48 3.00e-122 432.00
IUUC-Pab-136646 Pongo abelii 73.79 0.00e+00 1074.00
IUUC-Pca-136653 Procavia capensis 59.75 3.00e-148 519.00
IUUC-Pva-136660 Pteropus vampyrus 68.93 0.00e+00 994.00
IUUC-Sha-136672 Sarcophilus harrisii 47.02 3.00e-126 445.00
IUUC-Sar-136686 Sorex araneus 58.76 0.00e+00 823.00
IUUC-Ssc-136692 Sus scrofa 57.57 0.00e+00 656.00
IUUC-Tgu-136695 Taeniopygia guttata 70.26 1.00e-163 569.00
IUUC-Tru-136699 Takifugu rubripes 46.85 5.00e-128 451.00
IUUC-Tsy-136702 Tarsius syrichta 53.48 3.00e-179 622.00
IUUC-Tni-136707 Tetraodon nigroviridis 51.95 1.00e-111 397.00
IUUC-Tbe-136720 Tupaia belangeri 67.18 8.00e-121 427.00
IUUC-Ttr-136723 Tursiops truncatus 69.72 0.00e+00 911.00
IUUC-Vpa-136730 Vicugna pacos 59.27 1.00e-117 417.00
IUUC-Xtr-136735 Xenopus tropicalis 64.02 8.00e-139 487.00
Created Date 25-Jun-2017

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