iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	93.13	2.00e-59	226.00	IUUC-Hsa-046291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGAKQSGPAA NGRTRAYSGS DLPSGTSGGG GADGARAARF AAPVPGAQQP SASASTAAAA 60
AAAAAARQSG GLGPGSARSR SLGGAVGSAA SGRAAQSAFS IPSSGGGSGG PYGSQDSVHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCCGGGGC GGCGCGGACA TGGGCGCCAA GCAGAGCGGC CCCGCCGCCA ACGGCCGCAC 60
CCGCGCCTAC TCGGGCTCGG ACCTGCCCTC CGGGACCAGC GGCGGCGGCG GGGCGGACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030659--C:cytoplasmic vesicle membrane
GO:0005886--C:plasma membrane
GO:0043234--C:protein complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002006	Ailuropoda melanoleuca	99.05	2.00e-62	229.00
IUUC-Apl-003883	Anas platyrhynchos	95.51	2.00e-49	186.00
IUUC-Aca-004497	Anolis carolinensis	76.40	6.00e-60	223.00
IUUC-Acl-008261	Aspergillus clavatus	46.30	2.00e-10	60.50
IUUC-Afl-008724	Aspergillus flavus	51.85	7.00e-12	65.50
IUUC-Afu-008835	Aspergillus fumigatus	47.17	2.00e-10	60.50
IUUC-Ang-009666	Aspergillus niger	48.15	1.00e-11	64.70
IUUC-Ate-010331	Aspergillus terreus	46.30	3.00e-10	60.10
IUUC-Ame-011041	Astyanax mexicanus	87.50	2.00e-54	204.00
IUUC-Bgr-012049	Blumeria graminis	45.95	4.00e-07	50.10
IUUC-Bta-013206	Bos taurus	75.69	3.00e-70	257.00
IUUC-Cel-018347	Caenorhabditis elegans	62.14	1.00e-35	142.00
IUUC-Cja-019912	Callithrix jacchus	99.02	9.00e-59	219.00
IUUC-Cpo-021391	Cavia porcellus	98.86	5.00e-52	194.00
IUUC-Csa-023094	Chlorocebus sabaeus	99.02	3.00e-59	221.00
IUUC-Cin-025162	Ciona intestinalis	60.40	9.00e-37	146.00
IUUC-Csv-026373	Ciona savignyi	59.41	5.00e-37	147.00
IUUC-Cgl-026728	Colletotrichum gloeosporioides	29.46	1.00e-09	57.80
IUUC-Dre-027399	Danio rerio	72.64	3.00e-47	180.00
IUUC-Dno-029420	Dasypus novemcinctus	99.02	2.00e-59	221.00
IUUC-Dse-031322	Dothistroma septosporum	44.68	6.00e-09	55.80
IUUC-Dme-031584	Drosophila melanogaster	73.47	3.00e-41	161.00
IUUC-Eca-034068	Equus caballus	100.00	2.00e-51	192.00
IUUC-Fca-035770	Felis catus	97.73	6.00e-52	194.00
IUUC-Fox-038020	Fusarium oxysporum	32.50	9.00e-11	62.00
IUUC-Gmo-039148	Gadus morhua	60.00	6.00e-65	239.00
IUUC-Ggr-039766	Gaeumannomyces graminis	52.00	9.00e-09	55.50
IUUC-Gga-041010	Gallus gallus	98.04	3.00e-58	218.00
IUUC-Gac-041711	Gasterosteus aculeatus	95.15	8.00e-57	213.00
IUUC-Hsa-046291	Homo sapiens	98.04	1.00e-58	219.00
IUUC-Lch-049870	Latimeria chalumnae	95.29	5.00e-46	177.00
IUUC-Loc-052877	Lepisosteus oculatus	94.17	5.00e-57	213.00
IUUC-Lma-053072	Leptosphaeria maculans	43.64	8.00e-09	55.50
IUUC-Laf-054451	Loxodonta africana	87.58	2.00e-59	221.00
IUUC-Mcc-055078	Macaca mulatta	91.60	1.00e-61	229.00
IUUC-Mmr-061658	Microcebus murinus	98.86	5.00e-52	194.00
IUUC-Mdo-062052	Monodelphis domestica	83.21	1.00e-59	222.00
IUUC-Mmu-063964	Mus musculus	97.71	2.00e-63	234.00
IUUC-Mlu-067009	Myotis lucifugus	96.12	9.00e-57	211.00
IUUC-Nfi-068593	Neosartorya fischeri	47.17	2.00e-10	61.20
IUUC-Ncr-068662	Neurospora crassa	48.98	5.00e-09	56.20
IUUC-Nle-069306	Nomascus leucogenys	87.12	3.00e-59	221.00
IUUC-Oga-088009	Otolemur garnettii	95.42	6.00e-61	226.00
IUUC-Ptr-091609	Pan troglodytes	98.04	3.00e-59	221.00
IUUC-Pan-092598	Papio anubis	91.60	1.00e-61	229.00
IUUC-Psi-093749	Pelodiscus sinensis	97.65	3.00e-48	182.00
IUUC-Pma-094361	Petromyzon marinus	77.01	6.00e-40	154.00
IUUC-Pfo-096340	Poecilia formosa	87.07	3.00e-57	214.00
IUUC-Pab-097603	Pongo abelii	91.60	1.00e-61	229.00
IUUC-Pva-102216	Pteropus vampyrus	100.00	3.00e-49	187.00
IUUC-Pte-104063	Pyrenophora teres	37.70	2.00e-08	54.30
IUUC-Pyt-104423	Pyrenophora triticirepentis	37.70	2.00e-08	54.30
IUUC-Ssl-108602	Sclerotinia sclerotiorum	46.00	4.00e-08	52.80
IUUC-Ssc-116023	Sus scrofa	97.73	5.00e-50	188.00
IUUC-Tru-117571	Takifugu rubripes	78.63	9.00e-57	212.00
IUUC-Tni-120337	Tetraodon nigroviridis	87.38	2.00e-53	202.00
IUUC-Tbe-127983	Tupaia belangeri	94.66	1.00e-60	225.00
IUUC-Ttr-129090	Tursiops truncatus	93.13	2.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence