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Tag Content
iUUCD ID IUUC-Oga-089173
Ensembl Protein ID ENSOGAP00000009435.2
UniProt Accession H0X2X6; H0X2X6_OTOGA
Genbank Protein ID ENSOGAP00000009435
Protein Name Uncharacterized protein
Genbank Nucleotide ID AAQR03161684
Gene Name DDX58
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOGAG00000010536.2 ENSOGAT00000010542.2 ENSOGAP00000009435.2
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/CARD 4.00e-51 171.5 1 74
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/CARD

   S: 1    tdeeyrlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL..vqkegWfrefl 73
    +++e+rl l ++ d+vrk+Ld+t +l+ y++++++e e+++i+a++++kg+m+aa+l+Lk L +q+egWfr+fl
   Q: 1 MTTEQRLNLHAFGDYVRKTLDPTHILS-YMAPWFREDEVQYIQAEKNNKGPMEAATLFLKLLleLQEEGWFRAFL 74
    689************************.*********************************************96 PP
   

Organism Otolemur garnettii
Protein Sequence
(Fasta)
MTTEQRLNLH AFGDYVRKTL DPTHILSYMA PWFREDEVQY IQAEKNNKGP MEAATLFLKL 60
LLELQEEGWF RAFLDALNQA GYSGLYEAIE SWDFQKIEKL EDYRSLLKRL QPEFKARIIP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Oga-089173|UBD,CARD|Otolemur garnettii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGACCACCG AGCAGCGGCT GAATCTGCAC GCTTTTGGGG ACTATGTCCG GAAGACGCTG 60
GACCCTACCC ACATCCTGAG CTACATGGCC CCCTGGTTCA GGGAGGGTGA GTGTTTTCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Oga-089173|UBD,CARD|Otolemur garnettii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0005923--C:bicellular tight junction
GO:0005829--C:cytosol
GO:0032587--C:ruffle membrane
GO:0005524--F:ATP binding
GO:0003690--F:double-stranded DNA binding
GO:0003725--F:double-stranded RNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003727--F:single-stranded RNA binding
GO:0008270--F:zinc ion binding
GO:0009597--P:detection of virus
GO:0045087--P:innate immune response
GO:0002230--P:positive regulation of defense response to virus by host
GO:0032725--P:positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032727--P:positive regulation of interferon-alpha production
GO:0032728--P:positive regulation of interferon-beta production
GO:0032755--P:positive regulation of interleukin-6 production
GO:0032757--P:positive regulation of interleukin-8 production
GO:0042993--P:positive regulation of transcription factor import into nucleus
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043330--P:response to exogenous dsRNA
GO:0039529--P:RIG-I signaling pathway

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001898 Ailuropoda melanoleuca 78.41 0.00e+00 1425.00
IUUC-Apl-003966 Anas platyrhynchos 53.26 0.00e+00 878.00
IUUC-Aca-004499 Anolis carolinensis 45.69 0.00e+00 747.00
IUUC-Ame-011950 Astyanax mexicanus 42.71 0.00e+00 645.00
IUUC-Bta-012489 Bos taurus 77.93 0.00e+00 1406.00
IUUC-Cel-018230 Caenorhabditis elegans 30.49 2.00e-64 240.00
IUUC-Cja-018716 Callithrix jacchus 83.80 0.00e+00 1511.00
IUUC-Cfa-020269 Canis familiaris 80.73 0.00e+00 1452.00
IUUC-Cpo-022507 Cavia porcellus 75.86 0.00e+00 1371.00
IUUC-Csa-024209 Chlorocebus sabaeus 84.02 0.00e+00 1550.00
IUUC-Cho-025104 Choloepus hoffmanni 73.76 0.00e+00 1180.00
IUUC-Cin-025792 Ciona intestinalis 31.68 9.00e-76 278.00
IUUC-Cgl-026385 Colletotrichum gloeosporioides 24.54 3.00e-19 91.30
IUUC-Dno-028954 Dasypus novemcinctus 77.47 0.00e+00 1388.00
IUUC-Eca-034039 Equus caballus 81.06 0.00e+00 1490.00
IUUC-Eeu-035009 Erinaceus europaeus 68.75 0.00e+00 905.00
IUUC-Fca-036169 Felis catus 80.88 0.00e+00 1489.00
IUUC-Fal-037579 Ficedula albicollis 53.02 0.00e+00 882.00
IUUC-Ggo-045318 Gorilla gorilla 82.27 0.00e+00 1431.00
IUUC-Hsa-046671 Homo sapiens 84.45 0.00e+00 1553.00
IUUC-Itr-047996 Ictidomys tridecemlineatus 76.92 0.00e+00 1422.00
IUUC-Lch-050461 Latimeria chalumnae 50.38 0.00e+00 838.00
IUUC-Loc-052582 Lepisosteus oculatus 47.52 0.00e+00 795.00
IUUC-Laf-054324 Loxodonta africana 78.05 0.00e+00 1404.00
IUUC-Mcc-055390 Macaca mulatta 83.48 0.00e+00 1533.00
IUUC-Meu-056365 Macropus eugenii 54.39 3.00e-175 608.00
IUUC-Mmr-061407 Microcebus murinus 85.42 0.00e+00 1594.00
IUUC-Mmu-063939 Mus musculus 73.59 0.00e+00 1313.00
IUUC-Mpu-066226 Mustela putorius furo 78.47 0.00e+00 1325.00
IUUC-Mlu-068092 Myotis lucifugus 80.86 0.00e+00 1442.00
IUUC-Nfi-068405 Neosartorya fischeri 23.91 2.00e-23 105.00
IUUC-Opr-070246 Ochotona princeps 66.53 0.00e+00 672.00
IUUC-Oan-072742 Ornithorhynchus anatinus 60.49 0.00e+00 938.00
IUUC-Ocu-073959 Oryctolagus cuniculus 74.57 0.00e+00 1380.00
IUUC-Oar-089369 Ovis aries 77.18 0.00e+00 1381.00
IUUC-Ptr-091032 Pan troglodytes 84.45 0.00e+00 1553.00
IUUC-Pan-092383 Papio anubis 83.60 0.00e+00 1531.00
IUUC-Psi-093432 Pelodiscus sinensis 55.54 0.00e+00 997.00
IUUC-Pma-094367 Petromyzon marinus 41.11 8.00e-110 390.00
IUUC-Pab-098416 Pongo abelii 84.13 0.00e+00 1451.00
IUUC-Pca-101006 Procavia capensis 75.95 3.00e-179 622.00
IUUC-Pva-102966 Pteropus vampyrus 80.54 0.00e+00 1468.00
IUUC-Rno-105059 Rattus norvegicus 74.49 0.00e+00 877.00
IUUC-Ssl-108450 Sclerotinia sclerotiorum 27.55 2.00e-03 39.70
IUUC-Sar-113202 Sorex araneus 66.58 0.00e+00 999.00
IUUC-Ssc-116120 Sus scrofa 78.26 0.00e+00 1414.00
IUUC-Tgu-117314 Taeniopygia guttata 52.18 0.00e+00 885.00
IUUC-Tsy-119453 Tarsius syrichta 81.38 0.00e+00 826.00
IUUC-Tre-122194 Trichoderma reesei 25.19 4.00e-18 87.40
IUUC-Ttr-128421 Tursiops truncatus 75.99 0.00e+00 1159.00
IUUC-Vpa-130602 Vicugna pacos 77.53 0.00e+00 1364.00
Created Date 25-Jun-2017

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