iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__3303__AT2G17200.1	fgenesh2_kg.3__3303__AT2G17200.1	fgenesh2_kg.3__3303__AT2G17200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-11	44.7	515	550
ULD/UDP/UBQ/UBQ_PIM	1.00e-24	86.9	20	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 5    dkleqlveMGF.dreealqaLraannnleaAveyLl 39
            +l+ql+eMGF dr e+++aL+a+n+n++aAve+Ll
   Q: 515  TQLQQLQEMGFyDRAENIRALLATNGNVNAAVERLL 550
           68*********************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
            +++++++g++f ++ s d+tve++Ke++a++s+vp++qq+LIy+G+iLkDd+tL ++g++ ++++h+v   ++
   Q: 20   AVNIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMVRGSAP 93
           699******************************************************************87665 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGGEGGDSSQ PQTGEGAAVA VNIRCSNGTK FSVKTSLDST VESFKELVAQ SSDVPANQQR 60
LIYKGRILKD DQTLLSYGLQ ADHTIHMVRG SAPSSAPPSA PAANAGNQTT APSVTRGVGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTACCGAAC CGACTAAGAG CTTTTGTCTA AATCTTGATT GAATTTTTCT AGGGTTAGGG 60
CTCCTGATCG ATTTCGCGAG CTGATTTGTT GAATTATAGG ATCCGAAATT AGAATGGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus

KEGG

aly:ARALYDRAFT_480602

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007271	Arabidopsis thaliana	93.01	0.00e+00	762.00
IUUC-Cel-018631	Caenorhabditis elegans	34.71	2.00e-45	176.00
IUUC-Cre-022634	Chlamydomonas reinhardtii	53.57	6.00e-14	71.20
IUUC-Ggr-039961	Gaeumannomyces graminis	29.13	1.00e-13	70.10
IUUC-Mtr-058674	Medicago truncatula	58.10	1.00e-98	353.00
IUUC-Mga-059894	Meleagris gallopavo	35.42	2.00e-43	169.00
IUUC-Obr-076444	Oryza brachyantha	77.52	3.00e-49	189.00
IUUC-Ogl-077319	Oryza glaberrima	59.79	2.00e-97	348.00
IUUC-Ogu-078074	Oryza glumaepatula	58.15	1.00e-99	356.00
IUUC-Oin-079142	Oryza indica	58.91	1.00e-96	346.00
IUUC-Olo-080565	Oryza longistaminata	58.29	2.00e-100	358.00
IUUC-Oni-082272	Oryza nivara	58.91	1.00e-96	346.00
IUUC-Oru-085257	Oryza rufipogon	58.91	1.00e-96	346.00
IUUC-Osa-086257	Oryza sativa	59.79	2.00e-97	348.00
IUUC-Olu-087597	Ostreococcus lucimarinus	34.82	9.00e-39	154.00
IUUC-Psi-093261	Pelodiscus sinensis	56.82	5.00e-09	55.50
IUUC-Pma-094727	Petromyzon marinus	37.14	1.00e-12	67.80
IUUC-Ppa-095193	Physcomitrella patens	73.64	2.00e-54	206.00
IUUC-Pab-098699	Pongo abelii	36.97	5.00e-51	194.00
IUUC-Pop-099549	Populus trichocarpa	62.26	5.00e-153	533.00
IUUC-Rno-104908	Rattus norvegicus	34.75	6.00e-55	207.00
IUUC-Sly-111240	Solanum lycopersicum	62.24	2.00e-81	295.00
IUUC-Tsy-119596	Tarsius syrichta	58.10	3.00e-35	142.00
IUUC-Tme-127116	Tuber melanosporum	28.34	7.00e-17	81.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence