iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2287__AT2G41500.1	fgenesh2_kg.4__2287__AT2G41500.1	fgenesh2_kg.4__2287__AT2G41500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-33	113.4	424	450
UBD/Beta-Prp	3.50e-59	201.1	250	490

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlr 31
           ++++f ++  +l+sG+ D+++++WDlr
   Q: 424  FSVNFsPNgYHLASGGEDNQCRIWDLR 450
           67999*77799**************97 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvtt.gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstg 84
           ++ ++t   fs+d+++lat s +g +k+w++ +  ++++ l++h++  t+v fsp ++ l+t+s Drt+k+w  + g
   Q: 250  DDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQvTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-G 325
           5779999***********************9882456***********************************975.8 PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtv 161
           + ++t++gh d++  ++f+psg++l ++s d+t r+wd++tg +l  +++gh+++v ++++++dg l +s++lD+  
   Q: 326  TLLQTFEGHLDRLARVAFHPSGKYLGTTSFDKTWRLWDINTGAELL-LQEGHSRSVYGIAFQQDGALAASSGLDSLA 401
           9*********************************************.****************************** PP
   S: 162  rlWdlktgkllrtltgghtdsvy.slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnder 236
           r+Wdl+tg+ +  ++g h ++v+ s++f++ng +l+sg++d++ ++wdl+  + +++  +h + v++v+   +++ +
   Q: 402  RVWDLRTGRSILVFQG-HIKPVRfSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEpQEGYF 477
           ***************9.*****95677********************************************667778 PP
   S: 237  lvsgssDgsiriW 249
           l+++s D  ++iW
   Q: 478  LATASYDMKVNIW 490
           89999******** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEPNKEDNVS LPATAQITAP PILQDAASQP GFSAIPPVVP PPMAPIPMMP HPPVARPPTF 60
KPPVSQNGRA KTSDSDSESD DEHFEISEES RQVRERQEKA LQDLLVKRRA AAMAVPTNDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTCGCTTC AATTTTCCGT TTTTGCTACC GTCGTCTCTG GAGACTGGAG AGGTATGAAC 60
AACTTTCTCT GATTTCAGCT TCTCTTTGTT TCTCATGAAG ATGGATTTTT AACCAATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0016607--C:nuclear speck
GO:0001709--P:cell fate determination
GO:0007267--P:cell-cell signaling
GO:0009560--P:embryo sac egg cell differentiation

KEGG

aly:ARALYDRAFT_483227

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	66.20	2.00e-158	551.00
IUUC-Aml-001737	Ailuropoda melanoleuca	43.26	1.00e-108	386.00
IUUC-Atr-002828	Amborella trichopoda	64.25	3.00e-168	584.00
IUUC-Apl-003723	Anas platyrhynchos	42.48	8.00e-108	383.00
IUUC-Aca-004972	Anolis carolinensis	42.48	3.00e-105	374.00
IUUC-Ath-007367	Arabidopsis thaliana	90.29	0.00e+00	936.00
IUUC-Ago-007893	Ashbya gossypii	33.88	2.00e-53	202.00
IUUC-Acl-008236	Aspergillus clavatus	35.27	3.00e-73	268.00
IUUC-Afl-008522	Aspergillus flavus	36.33	6.00e-76	277.00
IUUC-Afu-008904	Aspergillus fumigatus	36.35	1.00e-77	283.00
IUUC-Ani-009198	Aspergillus nidulans	37.71	2.00e-79	289.00
IUUC-Ang-009662	Aspergillus niger	39.51	2.00e-82	298.00
IUUC-Aor-009881	Aspergillus oryzae	36.33	3.00e-76	278.00
IUUC-Ate-010333	Aspergillus terreus	35.61	9.00e-75	273.00
IUUC-Ame-011697	Astyanax mexicanus	41.81	7.00e-105	373.00
IUUC-Bgr-012254	Blumeria graminis	35.42	8.00e-77	280.00
IUUC-Bta-012615	Bos taurus	43.26	6.00e-109	387.00
IUUC-Bci-013720	Botrytis cinerea	37.74	8.00e-80	290.00
IUUC-Bdi-014302	Brachypodium distachyon	66.97	9.00e-167	579.00
IUUC-Bol-015594	Brassica oleracea	91.19	0.00e+00	832.00
IUUC-Bra-017465	Brassica rapa	85.71	0.00e+00	840.00
IUUC-Cel-018632	Caenorhabditis elegans	35.70	4.00e-72	264.00
IUUC-Cja-019747	Callithrix jacchus	43.26	8.00e-109	386.00
IUUC-Cfa-020288	Canis familiaris	43.26	1.00e-108	386.00
IUUC-Cpo-021440	Cavia porcellus	43.04	4.00e-107	380.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	49.43	2.00e-95	341.00
IUUC-Csa-023139	Chlorocebus sabaeus	46.39	7.00e-89	319.00
IUUC-Cho-024481	Choloepus hoffmanni	42.27	4.00e-106	377.00
IUUC-Cin-025106	Ciona intestinalis	38.43	2.00e-91	328.00
IUUC-Csv-026087	Ciona savignyi	39.96	7.00e-93	333.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	34.71	8.00e-75	274.00
IUUC-Cne-026793	Cryptococcus neoformans	37.15	4.00e-85	308.00
IUUC-Dre-028723	Danio rerio	42.95	7.00e-105	373.00
IUUC-Dno-029299	Dasypus novemcinctus	43.04	2.00e-108	385.00
IUUC-Dse-031562	Dothistroma septosporum	34.21	6.00e-73	267.00
IUUC-Dme-031783	Drosophila melanogaster	38.91	1.00e-78	286.00
IUUC-Ete-032669	Echinops telfairi	43.26	3.00e-109	388.00
IUUC-Eca-033566	Equus caballus	43.26	2.00e-108	385.00
IUUC-Eeu-034524	Erinaceus europaeus	49.58	1.00e-68	253.00
IUUC-Fca-036215	Felis catus	43.26	1.00e-108	386.00
IUUC-Fal-037018	Ficedula albicollis	40.91	9.00e-89	320.00
IUUC-Fox-037936	Fusarium oxysporum	33.82	5.00e-68	251.00
IUUC-Fso-038366	Fusarium solani	34.59	7.00e-73	267.00
IUUC-Gmo-038966	Gadus morhua	41.43	9.00e-79	286.00
IUUC-Ggr-039942	Gaeumannomyces graminis	34.95	2.00e-67	249.00
IUUC-Gga-040797	Gallus gallus	42.70	2.00e-108	385.00
IUUC-Gac-042598	Gasterosteus aculeatus	41.06	1.00e-95	342.00
IUUC-Gma-044097	Glycine max	69.45	3.00e-168	584.00
IUUC-Ggo-044682	Gorilla gorilla	43.26	2.00e-108	385.00
IUUC-Hsa-045804	Homo sapiens	43.26	8.00e-109	386.00
IUUC-Hvu-047567	Hordeum vulgare	64.72	4.00e-152	530.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	43.48	2.00e-109	388.00
IUUC-Kpa-049369	Komagataella pastoris	31.12	1.00e-50	193.00
IUUC-Lch-050074	Latimeria chalumnae	41.56	2.00e-93	335.00
IUUC-Lpe-051333	Leersia perrieri	65.80	1.00e-147	514.00
IUUC-Loc-052164	Lepisosteus oculatus	41.61	4.00e-106	377.00
IUUC-Lma-053088	Leptosphaeria maculans	37.47	4.00e-72	264.00
IUUC-Laf-053460	Loxodonta africana	43.26	6.00e-109	387.00
IUUC-Mcc-055859	Macaca mulatta	43.26	1.00e-108	386.00
IUUC-Meu-056134	Macropus eugenii	42.61	5.00e-107	380.00
IUUC-Mor-057251	Magnaporthe oryzae	35.90	5.00e-73	268.00
IUUC-Mpo-057375	Magnaporthe poae	41.43	2.00e-53	201.00
IUUC-Mtr-057656	Medicago truncatula	68.79	2.00e-157	548.00
IUUC-Mla-059145	Melampsora laricipopulina	40.22	6.00e-81	293.00
IUUC-Mga-059855	Meleagris gallopavo	42.48	7.00e-108	383.00
IUUC-Mvi-060372	Microbotryum violaceum	38.79	6.00e-73	267.00
IUUC-Mmr-060826	Microcebus murinus	43.48	6.00e-109	387.00
IUUC-Mdo-062748	Monodelphis domestica	42.39	1.00e-106	379.00
IUUC-Mmu-063351	Mus musculus	43.04	7.00e-108	383.00
IUUC-Mac-064846	Musa acuminata	68.14	4.00e-156	543.00
IUUC-Mpu-066006	Mustela putorius furo	43.26	1.00e-108	386.00
IUUC-Mlu-067398	Myotis lucifugus	43.26	1.00e-108	386.00
IUUC-Nfi-068399	Neosartorya fischeri	36.69	2.00e-79	289.00
IUUC-Ncr-068711	Neurospora crassa	36.34	5.00e-78	284.00
IUUC-Nle-069982	Nomascus leucogenys	43.26	8.00e-109	386.00
IUUC-Opr-070596	Ochotona princeps	43.26	9.00e-109	386.00
IUUC-Ont-072374	Oreochromis niloticus	42.69	1.00e-97	349.00
IUUC-Oan-073166	Ornithorhynchus anatinus	45.53	7.00e-93	333.00
IUUC-Ocu-074371	Oryctolagus cuniculus	43.04	3.00e-108	384.00
IUUC-Oba-075083	Oryza barthii	65.41	2.00e-158	551.00
IUUC-Obr-076405	Oryza brachyantha	67.22	8.00e-155	539.00
IUUC-Ogl-077683	Oryza glaberrima	65.41	4.00e-158	550.00
IUUC-Ogu-078486	Oryza glumaepatula	65.63	3.00e-158	551.00
IUUC-Oin-079679	Oryza indica	65.41	3.00e-163	568.00
IUUC-Olo-080243	Oryza longistaminata	65.74	2.00e-139	488.00
IUUC-Ome-081230	Oryza meridionalis	65.41	3.00e-163	567.00
IUUC-Oni-082961	Oryza nivara	65.41	2.00e-163	568.00
IUUC-Opu-083189	Oryza punctata	65.19	1.00e-162	565.00
IUUC-Oru-084353	Oryza rufipogon	66.35	1.00e-158	551.00
IUUC-Osa-085458	Oryza sativa	65.41	3.00e-163	567.00
IUUC-Ola-086940	Oryzias latipes	43.36	3.00e-104	371.00
IUUC-Olu-087580	Ostreococcus lucimarinus	39.45	2.00e-67	249.00
IUUC-Oga-088703	Otolemur garnettii	40.74	8.00e-102	363.00
IUUC-Oar-089829	Ovis aries	43.04	4.00e-108	384.00
IUUC-Ptr-090838	Pan troglodytes	43.26	8.00e-109	386.00
IUUC-Pan-092261	Papio anubis	42.95	4.00e-107	381.00
IUUC-Psi-093020	Pelodiscus sinensis	41.61	2.00e-106	379.00
IUUC-Pno-094858	Phaeosphaeria nodorum	35.70	2.00e-72	265.00
IUUC-Ppa-095531	Physcomitrella patens	60.94	8.00e-158	549.00
IUUC-Pfo-096812	Poecilia formosa	39.58	7.00e-82	297.00
IUUC-Pab-097805	Pongo abelii	45.25	7.00e-89	320.00
IUUC-Pop-100051	Populus trichocarpa	69.21	8.00e-175	606.00
IUUC-Pca-100152	Procavia capensis	43.04	2.00e-108	385.00
IUUC-Ppe-101244	Prunus persica	67.56	1.00e-164	572.00
IUUC-Pva-102529	Pteropus vampyrus	41.52	2.00e-101	362.00
IUUC-Pgr-103550	Puccinia graminis	35.91	5.00e-82	298.00
IUUC-Ptt-103951	Puccinia triticina	31.84	2.00e-68	252.00
IUUC-Pte-104151	Pyrenophora teres	35.17	2.00e-66	246.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	35.94	3.00e-67	248.00
IUUC-Rno-105747	Rattus norvegicus	42.83	3.00e-107	381.00
IUUC-Sce-106418	Saccharomyces cerevisiae	32.41	8.00e-58	217.00
IUUC-Sha-107334	Sarcophilus harrisii	42.61	6.00e-107	380.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	34.62	5.00e-63	234.00
IUUC-Spo-108189	Schizosaccharomyces pombe	39.36	5.00e-83	300.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	37.31	7.00e-79	287.00
IUUC-Smo-109578	Selaginella moellendorffii	58.54	2.00e-145	508.00
IUUC-Sit-110102	Setaria italica	65.56	5.00e-160	556.00
IUUC-Sly-111668	Solanum lycopersicum	68.72	9.00e-168	582.00
IUUC-Stu-111928	Solanum tuberosum	68.72	9.00e-168	582.00
IUUC-Sar-113266	Sorex araneus	37.47	3.00e-89	321.00
IUUC-Sbi-114134	Sorghum bicolor	65.56	5.00e-160	556.00
IUUC-Sre-115114	Sporisorium reilianum	38.84	3.00e-81	295.00
IUUC-Ssc-115443	Sus scrofa	43.26	9.00e-109	386.00
IUUC-Tgu-117157	Taeniopygia guttata	42.48	4.00e-108	384.00
IUUC-Tru-118587	Takifugu rubripes	44.32	2.00e-102	365.00
IUUC-Tsy-119157	Tarsius syrichta	45.81	4.00e-95	341.00
IUUC-Tni-120427	Tetraodon nigroviridis	43.39	1.00e-101	363.00
IUUC-Tca-121368	Theobroma cacao	72.77	0.00e+00	666.00
IUUC-Tre-122074	Trichoderma reesei	35.66	2.00e-72	266.00
IUUC-Tvi-122349	Trichoderma virens	34.79	7.00e-72	264.00
IUUC-Tae-125651	Triticum aestivum	65.98	2.00e-162	564.00
IUUC-Tur-126532	Triticum urartu	66.93	4.00e-145	507.00
IUUC-Tme-126951	Tuber melanosporum	39.63	1.00e-75	276.00
IUUC-Tbe-128136	Tupaia belangeri	39.78	2.00e-94	338.00
IUUC-Ttr-129169	Tursiops truncatus	36.39	8.00e-51	193.00
IUUC-Uma-129399	Ustilago maydis	37.09	7.00e-80	290.00
IUUC-Vda-129842	Verticillium dahliae	36.14	1.00e-77	283.00
IUUC-Vpa-130440	Vicugna pacos	43.26	6.00e-109	387.00
IUUC-Vvi-131075	Vitis vinifera	68.71	5.00e-172	597.00
IUUC-Xma-133002	Xiphophorus maculatus	45.53	2.00e-89	321.00
IUUC-Yli-134569	Yarrowia lipolytica	36.56	2.00e-70	259.00
IUUC-Zma-135799	Zea mays	63.39	5.00e-160	556.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence