iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086940

UUCD1 version

UUC-OrL-00987

Ensembl Protein ID

ENSORLP00000024425.1

UniProt Accession

H2MZD4; H2MZD4_ORYLA

Protein Name

Uncharacterized protein

Gene Name

prpf4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000019641.1	ENSORLT00000024426.1	ENSORLP00000024425.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-41	138.0	388	426
UBD/Beta-Prp	3.00e-101	338.8	212	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++l+f ++ ++l++Gs+D+t+kvW+lr  ++l 
   Q: 388  GHLKEIYSLHFsPNgHHLATGSGDNTCKVWELRNRKCLY 426
           7999********777******************999875 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvh 88
            ++ +i+  +fspd+++lat+s++g  k+w+v + +l+r+l gh+  v a+ f p++          l++++ D+t+k+w++++ ++v 
   Q: 212  GDDRPISFCHFSPDSKMLATASWSGLCKLWSVPDCNLIRTLRGHNTNVGAIVFRPQSGvsldqsdvNLASCAADGTVKLWNMESDEPVA 300
           57889999****************************************9999999988888899999********************** PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg 177
            ++gh+d+v  ++++psg +l ++  d+  r+wdle ++++   ++gh++ v  +++hpdg+l+++G+lD++ r+Wdl+tg+++  l+g
   Q: 301  DIEGHSDRVSRVAWHPSGRFLGTTCYDNSWRLWDLEVQEEIL-HQEGHSKGVHDLSFHPDGSLVATGGLDSFGRVWDLRTGRCVVFLEG 388
           ******************************************.********************************************99 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
            h + +ysl f++ng +l++gs d+t k+w+l++ +c++t+ +h++  + vrf   ++++l++g+ D++ ++W
   Q: 389  -HLKEIYSLHFSPNGHHLATGSGDNTCKVWELRNRKCLYTVPAHQNLLSTVRFQpTDGHFLLTGAYDNTAKVW 460
           .*****************************************************8899*************** PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSDEEDAVPV AKKSRVFYGS LEEKERERLS LQATGSDAVR AGIKAGNINI SSGETLEIED 60
RVSERQQEVL AEFERRRRAR QITVSTDDAE VKAGLRALGE PITLFGEGPA DRRERLRSVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACATATAT CCGGATCATT TAGCGCGTGG AGGCAGCTTT GTCGGATTAA GGTGAGTTTA 60
CGAAAAAAGT AACGAAGCTG TAGCAGCAAA AACAGTTAAG GACTAGCACG CGCTCACAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0043009--P:chordate embryonic development
GO:0060041--P:retina development in camera-type eye

KEGG

ola:101174721

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	45.56	8.00e-105	373.00
IUUC-Aml-001737	Ailuropoda melanoleuca	74.90	0.00e+00	786.00
IUUC-Atr-002828	Amborella trichopoda	43.33	5.00e-104	371.00
IUUC-Apl-003723	Anas platyrhynchos	75.84	0.00e+00	792.00
IUUC-Aca-004972	Anolis carolinensis	74.46	0.00e+00	749.00
IUUC-Aly-006531	Arabidopsis lyrata	43.85	7.00e-93	334.00
IUUC-Ath-007367	Arabidopsis thaliana	43.46	3.00e-107	382.00
IUUC-Ago-007893	Ashbya gossypii	33.26	2.00e-53	202.00
IUUC-Acl-008236	Aspergillus clavatus	37.45	8.00e-82	297.00
IUUC-Afl-008522	Aspergillus flavus	38.97	3.00e-92	332.00
IUUC-Afu-008904	Aspergillus fumigatus	38.13	2.00e-86	313.00
IUUC-Ani-009198	Aspergillus nidulans	39.20	4.00e-92	332.00
IUUC-Ang-009662	Aspergillus niger	40.93	2.00e-92	333.00
IUUC-Aor-009881	Aspergillus oryzae	38.97	3.00e-92	332.00
IUUC-Ate-010333	Aspergillus terreus	37.08	3.00e-81	295.00
IUUC-Ame-011697	Astyanax mexicanus	78.94	0.00e+00	805.00
IUUC-Bgr-012254	Blumeria graminis	40.04	5.00e-98	351.00
IUUC-Bta-012615	Bos taurus	74.50	0.00e+00	775.00
IUUC-Bci-013720	Botrytis cinerea	40.56	1.00e-98	353.00
IUUC-Bdi-014302	Brachypodium distachyon	45.31	7.00e-109	387.00
IUUC-Bol-015594	Brassica oleracea	43.01	1.00e-97	350.00
IUUC-Bra-017465	Brassica rapa	42.79	1.00e-97	350.00
IUUC-Cel-018632	Caenorhabditis elegans	45.47	5.00e-110	391.00
IUUC-Cja-019747	Callithrix jacchus	74.90	0.00e+00	788.00
IUUC-Cfa-020288	Canis familiaris	74.90	0.00e+00	786.00
IUUC-Cpo-021440	Cavia porcellus	73.56	0.00e+00	772.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	45.81	7.00e-87	313.00
IUUC-Csa-023139	Chlorocebus sabaeus	78.08	4.00e-168	583.00
IUUC-Cho-024481	Choloepus hoffmanni	74.34	0.00e+00	697.00
IUUC-Cin-025106	Ciona intestinalis	60.08	4.00e-178	617.00
IUUC-Csv-026087	Ciona savignyi	58.58	9.00e-175	606.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	39.02	3.00e-92	333.00
IUUC-Cne-026793	Cryptococcus neoformans	40.43	2.00e-103	369.00
IUUC-Dre-028723	Danio rerio	78.15	0.00e+00	777.00
IUUC-Dno-029299	Dasypus novemcinctus	74.50	0.00e+00	784.00
IUUC-Dor-030345	Dipodomys ordii	50.00	6.00e-60	224.00
IUUC-Dse-031562	Dothistroma septosporum	36.10	3.00e-82	298.00
IUUC-Dme-031783	Drosophila melanogaster	49.36	6.00e-133	467.00
IUUC-Ete-032669	Echinops telfairi	75.30	0.00e+00	788.00
IUUC-Eca-033566	Equus caballus	74.90	0.00e+00	786.00
IUUC-Eeu-034524	Erinaceus europaeus	60.09	1.00e-150	525.00
IUUC-Fca-036215	Felis catus	74.90	0.00e+00	786.00
IUUC-Fal-037018	Ficedula albicollis	75.52	0.00e+00	667.00
IUUC-Fox-037936	Fusarium oxysporum	37.47	1.00e-82	300.00
IUUC-Fso-038366	Fusarium solani	39.19	3.00e-89	322.00
IUUC-Gmo-038966	Gadus morhua	71.15	4.00e-152	530.00
IUUC-Ggr-039942	Gaeumannomyces graminis	38.12	9.00e-84	304.00
IUUC-Gga-040797	Gallus gallus	75.60	0.00e+00	788.00
IUUC-Gac-042598	Gasterosteus aculeatus	80.08	0.00e+00	771.00
IUUC-Gma-044220	Glycine max	46.27	4.00e-104	371.00
IUUC-Ggo-044682	Gorilla gorilla	74.75	0.00e+00	780.00
IUUC-Hsa-045804	Homo sapiens	74.90	0.00e+00	787.00
IUUC-Hvu-047567	Hordeum vulgare	45.12	4.00e-101	361.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	74.90	0.00e+00	789.00
IUUC-Kpa-049369	Komagataella pastoris	34.23	6.00e-64	238.00
IUUC-Lch-050074	Latimeria chalumnae	70.78	0.00e+00	719.00
IUUC-Lpe-051333	Leersia perrieri	43.56	2.00e-100	359.00
IUUC-Loc-052164	Lepisosteus oculatus	79.33	0.00e+00	813.00
IUUC-Lma-053088	Leptosphaeria maculans	36.61	9.00e-83	300.00
IUUC-Laf-053460	Loxodonta africana	74.90	0.00e+00	787.00
IUUC-Mcc-055859	Macaca mulatta	74.90	0.00e+00	786.00
IUUC-Meu-056134	Macropus eugenii	73.96	0.00e+00	788.00
IUUC-Mor-057251	Magnaporthe oryzae	36.81	2.00e-82	299.00
IUUC-Mpo-057375	Magnaporthe poae	41.20	3.00e-53	201.00
IUUC-Mtr-057656	Medicago truncatula	45.56	2.00e-96	345.00
IUUC-Mla-059145	Melampsora laricipopulina	39.60	2.00e-96	346.00
IUUC-Mga-059855	Meleagris gallopavo	75.05	0.00e+00	781.00
IUUC-Mvi-060372	Microbotryum violaceum	43.00	1.00e-97	350.00
IUUC-Mmr-060826	Microcebus murinus	74.90	0.00e+00	786.00
IUUC-Mdo-062748	Monodelphis domestica	74.65	0.00e+00	791.00
IUUC-Mmu-063351	Mus musculus	74.70	0.00e+00	783.00
IUUC-Mac-064846	Musa acuminata	45.62	9.00e-99	353.00
IUUC-Mpu-066006	Mustela putorius furo	74.90	0.00e+00	786.00
IUUC-Mlu-067398	Myotis lucifugus	74.70	0.00e+00	784.00
IUUC-Nfi-068399	Neosartorya fischeri	38.38	2.00e-92	332.00
IUUC-Ncr-068711	Neurospora crassa	38.40	2.00e-90	326.00
IUUC-Nle-069982	Nomascus leucogenys	74.90	0.00e+00	788.00
IUUC-Opr-070596	Ochotona princeps	75.40	0.00e+00	790.00
IUUC-Ont-072374	Oreochromis niloticus	90.98	0.00e+00	903.00
IUUC-Oan-073166	Ornithorhynchus anatinus	75.45	0.00e+00	635.00
IUUC-Ocu-074371	Oryctolagus cuniculus	75.10	0.00e+00	788.00
IUUC-Oba-075083	Oryza barthii	43.69	1.00e-99	357.00
IUUC-Obr-076405	Oryza brachyantha	44.26	4.00e-101	361.00
IUUC-Ogl-077683	Oryza glaberrima	43.69	1.00e-99	357.00
IUUC-Ogu-078486	Oryza glumaepatula	43.69	1.00e-99	356.00
IUUC-Oin-079679	Oryza indica	43.46	1.00e-102	367.00
IUUC-Olo-080243	Oryza longistaminata	45.76	1.00e-90	326.00
IUUC-Ome-081230	Oryza meridionalis	43.46	1.00e-102	366.00
IUUC-Oni-082961	Oryza nivara	43.46	2.00e-102	366.00
IUUC-Opu-083189	Oryza punctata	43.72	1.00e-100	359.00
IUUC-Oru-084353	Oryza rufipogon	43.46	2.00e-102	365.00
IUUC-Osa-085458	Oryza sativa	43.46	1.00e-102	366.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.24	5.00e-64	238.00
IUUC-Oga-088703	Otolemur garnettii	70.72	0.00e+00	736.00
IUUC-Oar-089829	Ovis aries	74.80	0.00e+00	774.00
IUUC-Ptr-090838	Pan troglodytes	74.90	0.00e+00	787.00
IUUC-Pan-092261	Papio anubis	74.95	0.00e+00	786.00
IUUC-Psi-093020	Pelodiscus sinensis	74.61	0.00e+00	789.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.98	8.00e-78	284.00
IUUC-Ppa-095531	Physcomitrella patens	45.00	1.00e-115	409.00
IUUC-Pfo-096812	Poecilia formosa	81.71	0.00e+00	806.00
IUUC-Pab-097805	Pongo abelii	66.73	0.00e+00	672.00
IUUC-Pop-100051	Populus trichocarpa	43.53	2.00e-102	366.00
IUUC-Pca-100152	Procavia capensis	74.70	0.00e+00	787.00
IUUC-Ppe-101244	Prunus persica	45.73	4.00e-108	384.00
IUUC-Pva-102529	Pteropus vampyrus	71.71	0.00e+00	743.00
IUUC-Pgr-103550	Puccinia graminis	35.15	7.00e-95	340.00
IUUC-Ptt-103951	Puccinia triticina	36.55	1.00e-72	267.00
IUUC-Pte-104151	Pyrenophora teres	36.33	2.00e-79	290.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	38.61	2.00e-81	296.00
IUUC-Rno-105747	Rattus norvegicus	74.70	0.00e+00	782.00
IUUC-Sce-106418	Saccharomyces cerevisiae	35.66	8.00e-68	250.00
IUUC-Sha-107334	Sarcophilus harrisii	74.46	0.00e+00	789.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	36.64	7.00e-72	264.00
IUUC-Spo-108189	Schizosaccharomyces pombe	36.91	4.00e-79	288.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	39.48	2.00e-96	346.00
IUUC-Smo-108924	Selaginella moellendorffii	44.21	4.00e-109	388.00
IUUC-Sit-110102	Setaria italica	43.26	2.00e-101	362.00
IUUC-Sly-111668	Solanum lycopersicum	46.86	3.00e-107	382.00
IUUC-Stu-111928	Solanum tuberosum	46.64	6.00e-107	381.00
IUUC-Sar-113266	Sorex araneus	66.40	0.00e+00	654.00
IUUC-Sbi-114134	Sorghum bicolor	43.02	3.00e-101	362.00
IUUC-Sre-115114	Sporisorium reilianum	41.34	4.00e-100	358.00
IUUC-Ssc-115443	Sus scrofa	74.90	0.00e+00	786.00
IUUC-Tgu-117157	Taeniopygia guttata	76.27	0.00e+00	758.00
IUUC-Tru-118587	Takifugu rubripes	85.35	0.00e+00	861.00
IUUC-Tsy-119157	Tarsius syrichta	76.41	0.00e+00	645.00
IUUC-Tni-120427	Tetraodon nigroviridis	86.96	0.00e+00	872.00
IUUC-Tca-121368	Theobroma cacao	44.89	2.00e-106	379.00
IUUC-Tre-122074	Trichoderma reesei	39.19	9.00e-89	320.00
IUUC-Tvi-122349	Trichoderma virens	38.27	2.00e-86	313.00
IUUC-Tae-125651	Triticum aestivum	45.56	4.00e-105	375.00
IUUC-Tur-125983	Triticum urartu	48.98	1.00e-86	312.00
IUUC-Tme-126951	Tuber melanosporum	40.63	1.00e-100	360.00
IUUC-Tbe-128136	Tupaia belangeri	67.60	0.00e+00	690.00
IUUC-Ttr-129169	Tursiops truncatus	78.52	7.00e-132	463.00
IUUC-Uma-129399	Ustilago maydis	41.10	1.00e-97	349.00
IUUC-Vda-129842	Verticillium dahliae	39.27	8.00e-92	330.00
IUUC-Vpa-130440	Vicugna pacos	74.95	0.00e+00	784.00
IUUC-Vvi-131075	Vitis vinifera	46.73	2.00e-107	383.00
IUUC-Xtr-132713	Xenopus tropicalis	43.22	4.00e-92	331.00
IUUC-Xma-133002	Xiphophorus maculatus	91.21	0.00e+00	681.00
IUUC-Yli-134569	Yarrowia lipolytica	36.50	2.00e-76	279.00
IUUC-Zma-135799	Zea mays	42.64	7.00e-102	364.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence