iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sre-115114

Ensembl Protein ID

CBQ70213

UniProt Accession

E6ZSK6; E6ZSK6_SPORE

Genbank Protein ID

CBQ70213.1

Protein Name

Related to PRP4-U4/U6 small nuclear ribonucleoprotein

Genbank Nucleotide ID

FQ311440

Gene Name

sr16418

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
sr16418	CBQ70213	CBQ70213

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-35	117.9	355	390
UBD/Beta-Prp	1.00e-62	210.5	181	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+ ++ +++f ++   l+++s+D t+++WD+r  +
   Q: 355  GHAKEILSIDFaPNgYQLATASGDDTVRIWDMRALK 390
           899*********77688**************98766 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           + +++   f+p+ +llatgs++g+ik+w v + +   +l  h+++v  + ++p++          lv+g+ D+ +++w+l++  ++ tl+ghe++v  ++f
   Q: 181  DRPVSMTRFAPNAQLLATGSWSGSIKLWHVPSANHKLTLRAHTDKVGGLAWHPRATltqdasvvNLVSGAGDASVCLWSLDSDRPLATLQGHEARVARTAF 281
           67888899**********************************************99999999999************************************ PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt 203
           +p+gd+++s+s d t r+wd+ + qcl  +++gh++ v +v++++dg l++sG+lD + r+Wd++tg+    l g h + + s++f +ng +l+++s d t
   Q: 282  HPTGDYVASASFDGTWRLWDVASSQCLT-VQEGHSKEVYSVEFQDDGALVASGGLDAIGRVWDMRTGRTAMVLDG-HAKEILSIDFAPNGYQLATASGDDT 380
           ***************************9.*********************************************9.************************* PP
   S: 204  vklwdlqtgecvrtlnghtdnvksvrfsp 232
           v++wd+++ + ++t  +h++ v++vrf++
   Q: 381  VRIWDMRALKSIYTIPAHKSSVSDVRFFR 409
           **************************984 PP

Organism

Sporisorium reilianum

Protein Sequence
(Fasta)

MDVDDAPTTS GVTIEDLLSS RSHAYSATDA ALSAQLDARK VARNLAIPTS DPKVRLRLRQ 60
LGEPITCFGE REMDRRERLR QLVARQIQQQ PAHDSQHSDS DAESGDDDHE DDDEEFYTEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTCG ACGACGCGCC CACCACCTCG GGCGTCACCA TCGAGGACCT GCTCTCGTCG 60
CGCTCCCACG CCTACTCTGC CACCGATGCC GCCCTGTCCG CTCAGCTCGA TGCGCGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	41.39	9.00e-89	318.00
IUUC-Aml-001737	Ailuropoda melanoleuca	41.43	2.00e-109	387.00
IUUC-Atr-002828	Amborella trichopoda	40.21	6.00e-90	323.00
IUUC-Apl-003723	Anas platyrhynchos	42.35	7.00e-110	389.00
IUUC-Aca-004972	Anolis carolinensis	42.62	1.00e-109	388.00
IUUC-Aly-006531	Arabidopsis lyrata	36.89	5.00e-73	266.00
IUUC-Ath-007367	Arabidopsis thaliana	38.77	2.00e-86	311.00
IUUC-Ago-007893	Ashbya gossypii	37.03	2.00e-68	251.00
IUUC-Acl-008236	Aspergillus clavatus	45.62	5.00e-105	373.00
IUUC-Afl-008522	Aspergillus flavus	47.62	3.00e-119	420.00
IUUC-Afu-008904	Aspergillus fumigatus	45.71	1.00e-109	388.00
IUUC-Ani-009198	Aspergillus nidulans	46.72	7.00e-123	432.00
IUUC-Ang-009662	Aspergillus niger	47.75	8.00e-115	405.00
IUUC-Aor-009881	Aspergillus oryzae	47.62	2.00e-119	421.00
IUUC-Ate-010333	Aspergillus terreus	48.54	2.00e-109	387.00
IUUC-Ame-011697	Astyanax mexicanus	40.50	4.00e-111	393.00
IUUC-Bgr-012254	Blumeria graminis	44.42	4.00e-115	407.00
IUUC-Bta-012615	Bos taurus	41.43	2.00e-109	387.00
IUUC-Bci-013720	Botrytis cinerea	43.09	4.00e-115	406.00
IUUC-Bdi-014302	Brachypodium distachyon	41.21	4.00e-94	336.00
IUUC-Bol-015594	Brassica oleracea	40.17	2.00e-76	278.00
IUUC-Bra-017465	Brassica rapa	39.96	3.00e-76	277.00
IUUC-Cel-018632	Caenorhabditis elegans	38.16	7.00e-83	299.00
IUUC-Cja-019747	Callithrix jacchus	41.43	1.00e-109	388.00
IUUC-Cfa-020288	Canis familiaris	41.43	2.00e-109	387.00
IUUC-Cpo-021440	Cavia porcellus	41.98	4.00e-110	389.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	42.25	2.00e-75	273.00
IUUC-Csa-023139	Chlorocebus sabaeus	44.38	6.00e-94	335.00
IUUC-Cho-024481	Choloepus hoffmanni	40.63	5.00e-102	362.00
IUUC-Cin-025106	Ciona intestinalis	38.40	2.00e-99	354.00
IUUC-Csv-026087	Ciona savignyi	39.22	3.00e-101	360.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	43.95	6.00e-114	403.00
IUUC-Cne-026793	Cryptococcus neoformans	52.33	6.00e-145	505.00
IUUC-Dre-028723	Danio rerio	42.61	8.00e-110	389.00
IUUC-Dno-029299	Dasypus novemcinctus	41.22	3.00e-109	387.00
IUUC-Dse-031562	Dothistroma septosporum	42.20	4.00e-103	366.00
IUUC-Dme-031783	Drosophila melanogaster	38.86	3.00e-81	294.00
IUUC-Ete-032669	Echinops telfairi	41.63	5.00e-110	389.00
IUUC-Eca-033566	Equus caballus	41.10	2.00e-109	387.00
IUUC-Eeu-034524	Erinaceus europaeus	51.68	1.00e-77	281.00
IUUC-Fca-036215	Felis catus	41.43	1.00e-109	388.00
IUUC-Fal-037018	Ficedula albicollis	44.33	2.00e-96	344.00
IUUC-Fox-037936	Fusarium oxysporum	44.26	4.00e-106	376.00
IUUC-Fso-038366	Fusarium solani	42.18	3.00e-111	394.00
IUUC-Gmo-038966	Gadus morhua	40.21	3.00e-76	276.00
IUUC-Ggr-039942	Gaeumannomyces graminis	43.56	1.00e-104	372.00
IUUC-Gga-040797	Gallus gallus	42.56	3.00e-110	390.00
IUUC-Gac-042598	Gasterosteus aculeatus	39.70	3.00e-91	327.00
IUUC-Gma-044220	Glycine max	41.04	1.00e-82	298.00
IUUC-Ggo-044682	Gorilla gorilla	41.77	3.00e-109	387.00
IUUC-Hsa-045804	Homo sapiens	41.43	1.00e-109	388.00
IUUC-Hvu-047567	Hordeum vulgare	38.38	8.00e-80	288.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	40.90	5.00e-109	386.00
IUUC-Kpa-049369	Komagataella pastoris	33.03	2.00e-64	237.00
IUUC-Lch-050074	Latimeria chalumnae	39.50	6.00e-93	332.00
IUUC-Lpe-051333	Leersia perrieri	41.35	1.00e-87	315.00
IUUC-Loc-052164	Lepisosteus oculatus	42.30	8.00e-110	389.00
IUUC-Lma-053088	Leptosphaeria maculans	43.38	4.00e-104	370.00
IUUC-Laf-053460	Loxodonta africana	41.43	1.00e-109	388.00
IUUC-Mcc-055859	Macaca mulatta	41.43	1.00e-109	388.00
IUUC-Meu-056134	Macropus eugenii	41.43	7.00e-110	389.00
IUUC-Mor-057251	Magnaporthe oryzae	43.50	2.00e-106	377.00
IUUC-Mpo-057375	Magnaporthe poae	48.61	7.00e-63	231.00
IUUC-Mtr-057656	Medicago truncatula	39.20	1.00e-76	278.00
IUUC-Mla-059145	Melampsora laricipopulina	55.05	1.00e-141	494.00
IUUC-Mga-059855	Meleagris gallopavo	42.56	3.00e-110	390.00
IUUC-Mvi-060372	Microbotryum violaceum	51.14	1.00e-120	425.00
IUUC-Mmr-060826	Microcebus murinus	41.31	2.00e-109	387.00
IUUC-Mdo-062748	Monodelphis domestica	41.63	1.00e-110	391.00
IUUC-Mmu-063351	Mus musculus	41.22	1.00e-108	385.00
IUUC-Mac-064846	Musa acuminata	40.27	3.00e-83	300.00
IUUC-Mpu-066006	Mustela putorius furo	41.43	1.00e-109	388.00
IUUC-Mlu-067398	Myotis lucifugus	41.31	2.00e-109	387.00
IUUC-Nfi-068399	Neosartorya fischeri	45.71	3.00e-116	410.00
IUUC-Ncr-068711	Neurospora crassa	45.11	2.00e-114	404.00
IUUC-Nle-069982	Nomascus leucogenys	41.43	1.00e-109	388.00
IUUC-Opr-070596	Ochotona princeps	41.68	7.00e-109	385.00
IUUC-Ont-072374	Oreochromis niloticus	41.67	4.00e-101	360.00
IUUC-Oan-073166	Ornithorhynchus anatinus	44.09	9.00e-99	352.00
IUUC-Ocu-074371	Oryctolagus cuniculus	41.22	3.00e-109	387.00
IUUC-Oba-075083	Oryza barthii	41.36	4.00e-89	320.00
IUUC-Obr-076405	Oryza brachyantha	40.81	1.00e-86	311.00
IUUC-Ogl-077683	Oryza glaberrima	41.36	8.00e-89	319.00
IUUC-Ogu-078486	Oryza glumaepatula	41.14	4.00e-88	317.00
IUUC-Oin-079679	Oryza indica	41.14	5.00e-91	326.00
IUUC-Olo-080243	Oryza longistaminata	41.94	2.00e-75	274.00
IUUC-Ome-081230	Oryza meridionalis	41.14	5.00e-91	326.00
IUUC-Oni-082961	Oryza nivara	41.14	5.00e-91	326.00
IUUC-Opu-083189	Oryza punctata	41.36	2.00e-89	321.00
IUUC-Oru-084353	Oryza rufipogon	41.39	2.00e-90	323.00
IUUC-Osa-085458	Oryza sativa	41.14	5.00e-91	326.00
IUUC-Ola-086940	Oryzias latipes	40.67	1.00e-103	368.00
IUUC-Olu-087580	Ostreococcus lucimarinus	37.40	5.00e-61	226.00
IUUC-Oga-088703	Otolemur garnettii	40.20	2.00e-101	361.00
IUUC-Oar-089829	Ovis aries	41.43	3.00e-109	387.00
IUUC-Ptr-090838	Pan troglodytes	41.43	1.00e-109	388.00
IUUC-Pan-092261	Papio anubis	41.34	5.00e-108	382.00
IUUC-Psi-093020	Pelodiscus sinensis	41.02	2.00e-110	391.00
IUUC-Pno-094858	Phaeosphaeria nodorum	43.63	1.00e-99	355.00
IUUC-Ppa-095531	Physcomitrella patens	41.20	6.00e-100	356.00
IUUC-Pfo-096812	Poecilia formosa	39.55	2.00e-85	307.00
IUUC-Pab-097805	Pongo abelii	43.82	1.00e-92	332.00
IUUC-Pop-100051	Populus trichocarpa	40.92	1.00e-82	298.00
IUUC-Pca-100152	Procavia capensis	41.43	2.00e-109	387.00
IUUC-Ppe-101244	Prunus persica	41.70	3.00e-87	313.00
IUUC-Pva-102529	Pteropus vampyrus	39.59	5.00e-100	356.00
IUUC-Pgr-103550	Puccinia graminis	51.47	6.00e-149	519.00
IUUC-Ptt-103951	Puccinia triticina	44.38	5.00e-109	386.00
IUUC-Pte-104151	Pyrenophora teres	41.72	5.00e-99	353.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	42.54	3.00e-102	363.00
IUUC-Rno-105747	Rattus norvegicus	41.22	2.00e-108	384.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.33	4.00e-65	240.00
IUUC-Sha-107334	Sarcophilus harrisii	41.43	7.00e-110	389.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	42.16	9.00e-89	318.00
IUUC-Spo-108189	Schizosaccharomyces pombe	42.03	6.00e-101	359.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	42.89	8.00e-114	402.00
IUUC-Smo-109578	Selaginella moellendorffii	39.15	2.00e-89	321.00
IUUC-Sit-110102	Setaria italica	41.70	6.00e-91	326.00
IUUC-Sly-111668	Solanum lycopersicum	40.31	1.00e-83	301.00
IUUC-Stu-111928	Solanum tuberosum	40.31	6.00e-84	303.00
IUUC-Sar-113266	Sorex araneus	43.01	5.00e-93	333.00
IUUC-Sbi-114134	Sorghum bicolor	40.83	4.00e-89	320.00
IUUC-Ssc-115443	Sus scrofa	41.10	1.00e-109	388.00
IUUC-Tgu-117157	Taeniopygia guttata	42.77	5.00e-110	389.00
IUUC-Tru-118587	Takifugu rubripes	43.05	3.00e-105	373.00
IUUC-Tsy-119157	Tarsius syrichta	44.62	7.00e-99	352.00
IUUC-Tni-120427	Tetraodon nigroviridis	42.66	8.00e-106	375.00
IUUC-Tca-121368	Theobroma cacao	38.12	1.00e-83	302.00
IUUC-Tre-122074	Trichoderma reesei	41.78	2.00e-109	387.00
IUUC-Tvi-122349	Trichoderma virens	41.87	2.00e-111	394.00
IUUC-Tae-124256	Triticum aestivum	37.98	2.00e-81	295.00
IUUC-Tur-126532	Triticum urartu	42.86	1.00e-82	298.00
IUUC-Tme-126951	Tuber melanosporum	48.31	7.00e-119	419.00
IUUC-Tbe-128136	Tupaia belangeri	38.16	8.00e-92	329.00
IUUC-Ttr-129169	Tursiops truncatus	40.52	3.00e-59	220.00
IUUC-Uma-129399	Ustilago maydis	81.62	0.00e+00	768.00
IUUC-Vda-129842	Verticillium dahliae	46.14	4.00e-117	413.00
IUUC-Vpa-130440	Vicugna pacos	41.63	6.00e-110	389.00
IUUC-Vvi-131075	Vitis vinifera	40.48	6.00e-86	310.00
IUUC-Xma-133002	Xiphophorus maculatus	44.09	1.00e-88	318.00
IUUC-Yli-134569	Yarrowia lipolytica	39.82	2.00e-86	310.00
IUUC-Zma-135799	Zea mays	39.13	4.00e-85	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence