iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088987

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03085388

Gene Name

RBBP7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000014995.2	ENSOGAT00000015003.2	ENSOGAP00000013427.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-32	108.5	315	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 315  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 349
           **********96554568*************9875 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAADAGVVGA AAFPGGGWRE RACGFLLHVV SSPSVGRAAL LSTGLHLRTV FEDTVEERVI 60
NEEYKIWKKN TPFLYDLVMT HALQWPSLTV QWLPEVTKPE GKDYALHWLV LGTHTSDEQN 120

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Nucleotide Sequence
(Fasta)

ATGGCTGCCG ACGCGGGCGT CGTGGGAGCC GCGGCCTTTC CCGGCGGGGG ATGGAGGGAG 60
CGGGCCTGTG GGTTTCTGCT GCACGTGGTT TCATCTCCCT CAGTGGGTCG CGCAGCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0016581--C:NuRD complex
GO:0003723--F:RNA binding
GO:0070370--P:cellular heat acclimation
GO:0030308--P:negative regulation of cell growth
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001256	Ailuropoda melanoleuca	91.25	0.00e+00	835.00
IUUC-Apl-003357	Anas platyrhynchos	85.19	0.00e+00	727.00
IUUC-Bta-013455	Bos taurus	91.73	0.00e+00	780.00
IUUC-Cja-019957	Callithrix jacchus	90.49	0.00e+00	813.00
IUUC-Cfa-020917	Canis familiaris	91.25	0.00e+00	836.00
IUUC-Cpo-022173	Cavia porcellus	92.20	0.00e+00	784.00
IUUC-Csa-023738	Chlorocebus sabaeus	92.20	0.00e+00	784.00
IUUC-Dno-029206	Dasypus novemcinctus	92.20	0.00e+00	784.00
IUUC-Dor-030733	Dipodomys ordii	78.30	0.00e+00	675.00
IUUC-Eca-034138	Equus caballus	91.01	0.00e+00	830.00
IUUC-Eeu-034644	Erinaceus europaeus	89.19	1.00e-117	416.00
IUUC-Fca-035977	Felis catus	91.03	0.00e+00	835.00
IUUC-Fal-037538	Ficedula albicollis	83.57	0.00e+00	708.00
IUUC-Gga-040764	Gallus gallus	86.52	0.00e+00	736.00
IUUC-Hsa-045677	Homo sapiens	92.20	0.00e+00	784.00
IUUC-Itr-048060	Ictidomys tridecemlineatus	92.86	0.00e+00	781.00
IUUC-Lma-053275	Leptosphaeria maculans	45.42	1.00e-67	249.00
IUUC-Laf-053973	Loxodonta africana	92.64	0.00e+00	783.00
IUUC-Mcc-055687	Macaca mulatta	92.20	0.00e+00	784.00
IUUC-Mga-059209	Meleagris gallopavo	83.89	0.00e+00	711.00
IUUC-Mmr-061008	Microcebus murinus	91.17	0.00e+00	825.00
IUUC-Mdo-062817	Monodelphis domestica	88.89	0.00e+00	756.00
IUUC-Mmu-063773	Mus musculus	92.20	0.00e+00	784.00
IUUC-Mpu-066722	Mustela putorius furo	91.47	0.00e+00	837.00
IUUC-Mlu-067813	Myotis lucifugus	90.79	0.00e+00	826.00
IUUC-Nle-070023	Nomascus leucogenys	90.37	0.00e+00	828.00
IUUC-Oan-073579	Ornithorhynchus anatinus	89.07	0.00e+00	753.00
IUUC-Ocu-074778	Oryctolagus cuniculus	91.96	0.00e+00	782.00
IUUC-Oar-090250	Ovis aries	90.27	0.00e+00	806.00
IUUC-Ptr-091598	Pan troglodytes	92.65	0.00e+00	784.00
IUUC-Pan-092412	Papio anubis	92.20	0.00e+00	784.00
IUUC-Psi-093162	Pelodiscus sinensis	87.72	0.00e+00	687.00
IUUC-Pab-097865	Pongo abelii	92.20	0.00e+00	784.00
IUUC-Pva-102369	Pteropus vampyrus	90.81	0.00e+00	832.00
IUUC-Rno-105892	Rattus norvegicus	92.20	0.00e+00	784.00
IUUC-Sha-107575	Sarcophilus harrisii	89.34	0.00e+00	756.00
IUUC-Sar-113236	Sorex araneus	87.39	0.00e+00	788.00
IUUC-Ssc-116352	Sus scrofa	91.25	0.00e+00	834.00
IUUC-Tsy-118854	Tarsius syrichta	91.03	0.00e+00	832.00
IUUC-Tbe-128010	Tupaia belangeri	80.09	0.00e+00	717.00
IUUC-Ttr-128558	Tursiops truncatus	79.65	0.00e+00	704.00
IUUC-Vpa-130664	Vicugna pacos	89.69	0.00e+00	796.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence