iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078655

Ensembl Protein ID

OGLUM07G11770.1

UniProt Accession

A0A0E0AJ18; A0A0E0AJ18_9ORYZ

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM07G11770	OGLUM07G11770.1	OGLUM07G11770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-12	47.8	343	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg+++k
   Q: 343  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCIK 381
           8*********9976699********************87 PP

Organism

Oryza glumaepatula

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGHSDGDHGS DLSADDSPWS EGSWSDDDDE GSLSFEDSGE GSDAESDEPD APAVEESDSS 60
EDEVAPRNTI GDVPLEWYKN EEHIGYDITG SKIKKRDREG RIEAYLRNAD DAKNWRKIYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCACA GCGACGGCGA CCACGGTAGC GACCTCTCCG CCGACGATTC CCCGTGGAGC 60
GAGGGGAGCT GGTCCGACGA CGATGACGAA GTGCGGCTCT CCTCTTCGAA GGATTTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	81.29	0.00e+00	921.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.19	3.00e-128	451.00
IUUC-Atr-003141	Amborella trichopoda	65.08	2.00e-160	558.00
IUUC-Apl-003545	Anas platyrhynchos	39.13	3.00e-115	408.00
IUUC-Aly-005649	Arabidopsis lyrata	62.52	0.00e+00	811.00
IUUC-Ath-007625	Arabidopsis thaliana	60.70	0.00e+00	790.00
IUUC-Ago-007958	Ashbya gossypii	38.21	3.00e-128	452.00
IUUC-Acl-008344	Aspergillus clavatus	39.75	4.00e-114	405.00
IUUC-Afl-008616	Aspergillus flavus	38.52	3.00e-115	408.00
IUUC-Afu-009083	Aspergillus fumigatus	39.45	9.00e-109	387.00
IUUC-Ani-009365	Aspergillus nidulans	38.58	8.00e-115	407.00
IUUC-Ang-009796	Aspergillus niger	38.85	2.00e-112	399.00
IUUC-Aor-010015	Aspergillus oryzae	38.52	4.00e-115	408.00
IUUC-Ate-010537	Aspergillus terreus	37.57	9.00e-119	420.00
IUUC-Ame-011767	Astyanax mexicanus	42.38	9.00e-59	219.00
IUUC-Bgr-012286	Blumeria graminis	39.76	2.00e-127	449.00
IUUC-Bta-013569	Bos taurus	43.20	2.00e-143	502.00
IUUC-Bci-013820	Botrytis cinerea	39.61	1.00e-118	420.00
IUUC-Bdi-014895	Brachypodium distachyon	79.91	0.00e+00	1059.00
IUUC-Bol-016099	Brassica oleracea	64.07	0.00e+00	837.00
IUUC-Bra-017174	Brassica rapa	63.96	0.00e+00	844.00
IUUC-Cel-018201	Caenorhabditis elegans	38.78	2.00e-117	416.00
IUUC-Cja-019009	Callithrix jacchus	39.80	3.00e-127	448.00
IUUC-Cfa-020173	Canis familiaris	39.81	3.00e-131	461.00
IUUC-Cpo-021796	Cavia porcellus	42.72	1.00e-139	489.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.86	1.00e-157	549.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.60	1.00e-145	509.00
IUUC-Cin-025782	Ciona intestinalis	43.47	5.00e-142	498.00
IUUC-Csv-026352	Ciona savignyi	42.63	1.00e-141	496.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	36.41	1.00e-100	360.00
IUUC-Cne-027004	Cryptococcus neoformans	41.92	4.00e-141	494.00
IUUC-Cme-027242	Cyanidioschyzon merolae	33.63	2.00e-95	343.00
IUUC-Dre-028658	Danio rerio	43.69	4.00e-151	528.00
IUUC-Dno-028883	Dasypus novemcinctus	43.13	3.00e-144	504.00
IUUC-Dor-031031	Dipodomys ordii	41.39	9.00e-144	503.00
IUUC-Dse-031443	Dothistroma septosporum	36.73	1.00e-109	390.00
IUUC-Dme-031786	Drosophila melanogaster	41.21	4.00e-142	498.00
IUUC-Eca-033677	Equus caballus	42.99	4.00e-141	494.00
IUUC-Eeu-035310	Erinaceus europaeus	38.69	8.00e-101	360.00
IUUC-Fca-035888	Felis catus	41.37	2.00e-136	478.00
IUUC-Fal-037438	Ficedula albicollis	44.03	1.00e-121	429.00
IUUC-Fox-037973	Fusarium oxysporum	39.57	1.00e-129	456.00
IUUC-Fso-038187	Fusarium solani	38.52	2.00e-126	446.00
IUUC-Gmo-039114	Gadus morhua	40.39	3.00e-127	448.00
IUUC-Ggr-039746	Gaeumannomyces graminis	38.91	9.00e-134	470.00
IUUC-Gga-040631	Gallus gallus	45.75	3.00e-84	304.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.41	4.00e-135	474.00
IUUC-Gma-044215	Glycine max	61.36	0.00e+00	817.00
IUUC-Ggo-045587	Gorilla gorilla	42.77	3.00e-145	508.00
IUUC-Hsa-046319	Homo sapiens	42.77	2.00e-145	509.00
IUUC-Hvu-047526	Hordeum vulgare	79.56	0.00e+00	1039.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.88	1.00e-141	496.00
IUUC-Kpa-049221	Komagataella pastoris	37.59	3.00e-119	422.00
IUUC-Lch-049640	Latimeria chalumnae	43.33	5.00e-154	537.00
IUUC-Lpe-051135	Leersia perrieri	92.69	0.00e+00	1067.00
IUUC-Loc-051930	Lepisosteus oculatus	44.82	5.00e-152	530.00
IUUC-Lma-053290	Leptosphaeria maculans	40.09	5.00e-118	418.00
IUUC-Laf-053903	Loxodonta africana	41.42	1.00e-128	453.00
IUUC-Mcc-055471	Macaca mulatta	42.77	1.00e-146	513.00
IUUC-Meu-056190	Macropus eugenii	43.41	5.00e-144	504.00
IUUC-Mor-057135	Magnaporthe oryzae	38.36	4.00e-125	441.00
IUUC-Mpo-057475	Magnaporthe poae	37.73	6.00e-124	437.00
IUUC-Mtr-058689	Medicago truncatula	52.25	3.00e-180	624.00
IUUC-Mla-059149	Melampsora laricipopulina	40.68	2.00e-131	462.00
IUUC-Mga-059645	Meleagris gallopavo	39.92	1.00e-46	179.00
IUUC-Mvi-060485	Microbotryum violaceum	40.06	2.00e-124	440.00
IUUC-Mmr-061674	Microcebus murinus	42.88	1.00e-136	479.00
IUUC-Mdo-062973	Monodelphis domestica	41.95	4.00e-148	518.00
IUUC-Mmu-064180	Mus musculus	41.64	7.00e-146	510.00
IUUC-Mac-064535	Musa acuminata	64.83	0.00e+00	659.00
IUUC-Mpu-066406	Mustela putorius furo	42.65	7.00e-147	513.00
IUUC-Mlu-067795	Myotis lucifugus	42.72	7.00e-134	470.00
IUUC-Nfi-068516	Neosartorya fischeri	37.95	5.00e-103	368.00
IUUC-Ncr-068767	Neurospora crassa	39.23	1.00e-118	420.00
IUUC-Opr-071084	Ochotona princeps	45.58	2.00e-63	235.00
IUUC-Ont-071614	Oreochromis niloticus	42.26	2.00e-145	509.00
IUUC-Oba-075980	Oryza barthii	96.18	0.00e+00	1138.00
IUUC-Obr-076799	Oryza brachyantha	92.77	0.00e+00	1200.00
IUUC-Ogl-077134	Oryza glaberrima	95.72	0.00e+00	1190.00
IUUC-Oin-079654	Oryza indica	95.72	0.00e+00	1160.00
IUUC-Olo-080706	Oryza longistaminata	96.79	0.00e+00	1147.00
IUUC-Ome-081716	Oryza meridionalis	91.85	0.00e+00	1076.00
IUUC-Oni-082508	Oryza nivara	93.75	0.00e+00	1152.00
IUUC-Opu-083707	Oryza punctata	95.56	0.00e+00	1120.00
IUUC-Oru-084453	Oryza rufipogon	96.79	0.00e+00	1147.00
IUUC-Osa-085811	Oryza sativa	95.72	0.00e+00	1190.00
IUUC-Ola-087361	Oryzias latipes	44.37	5.00e-149	521.00
IUUC-Oga-088015	Otolemur garnettii	42.39	2.00e-142	499.00
IUUC-Oar-090058	Ovis aries	40.59	1.00e-73	270.00
IUUC-Ptr-090631	Pan troglodytes	42.35	1.00e-54	206.00
IUUC-Pan-092306	Papio anubis	42.70	5.00e-145	507.00
IUUC-Pma-094622	Petromyzon marinus	43.69	1.00e-149	522.00
IUUC-Pno-094794	Phaeosphaeria nodorum	36.48	4.00e-106	378.00
IUUC-Ppa-095528	Physcomitrella patens	54.19	5.00e-151	527.00
IUUC-Pfo-096682	Poecilia formosa	42.83	1.00e-146	513.00
IUUC-Pab-097939	Pongo abelii	42.96	3.00e-133	468.00
IUUC-Pop-099043	Populus trichocarpa	67.08	0.00e+00	777.00
IUUC-Pca-100333	Procavia capensis	42.19	6.00e-143	500.00
IUUC-Ppe-102078	Prunus persica	61.75	0.00e+00	782.00
IUUC-Pgr-103525	Puccinia graminis	41.42	6.00e-124	437.00
IUUC-Ptt-103929	Puccinia triticina	41.17	2.00e-118	419.00
IUUC-Pte-104029	Pyrenophora teres	40.00	8.00e-127	447.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	40.00	2.00e-126	445.00
IUUC-Rno-105248	Rattus norvegicus	43.85	2.00e-143	502.00
IUUC-Sce-106381	Saccharomyces cerevisiae	38.21	3.00e-127	448.00
IUUC-Sha-106519	Sarcophilus harrisii	44.84	2.00e-149	521.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.69	6.00e-118	417.00
IUUC-Spo-108071	Schizosaccharomyces pombe	38.72	9.00e-117	414.00
IUUC-Smo-108881	Selaginella moellendorffii	59.50	0.00e+00	716.00
IUUC-Sit-109742	Setaria italica	83.85	0.00e+00	1095.00
IUUC-Sly-110970	Solanum lycopersicum	72.89	4.00e-149	520.00
IUUC-Stu-112593	Solanum tuberosum	67.05	0.00e+00	861.00
IUUC-Sar-113123	Sorex araneus	38.99	2.00e-57	215.00
IUUC-Sbi-113945	Sorghum bicolor	83.26	0.00e+00	1060.00
IUUC-Sre-115188	Sporisorium reilianum	38.77	1.00e-124	440.00
IUUC-Ssc-115352	Sus scrofa	42.39	3.00e-146	511.00
IUUC-Tru-117685	Takifugu rubripes	43.38	3.00e-146	511.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.10	1.00e-138	486.00
IUUC-Tca-121664	Theobroma cacao	66.72	0.00e+00	868.00
IUUC-Tre-122229	Trichoderma reesei	39.29	5.00e-114	404.00
IUUC-Tvi-122576	Trichoderma virens	39.81	1.00e-116	413.00
IUUC-Tae-124110	Triticum aestivum	82.60	0.00e+00	987.00
IUUC-Tur-126781	Triticum urartu	81.64	0.00e+00	909.00
IUUC-Tme-127080	Tuber melanosporum	41.42	3.00e-139	488.00
IUUC-Ttr-128514	Tursiops truncatus	42.25	5.00e-90	324.00
IUUC-Uma-129556	Ustilago maydis	38.62	2.00e-122	433.00
IUUC-Vda-129715	Verticillium dahliae	40.71	6.00e-127	447.00
IUUC-Vvi-131211	Vitis vinifera	65.17	0.00e+00	840.00
IUUC-Xma-133883	Xiphophorus maculatus	42.74	1.00e-141	496.00
IUUC-Yli-134438	Yarrowia lipolytica	39.22	2.00e-119	422.00
IUUC-Zma-135341	Zea mays	66.44	0.00e+00	848.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence