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Tag Content
UUCD2 ID IUUC-Smo-109604
UUCD1 version UUC-SeM-00107
Ensembl Protein ID EFJ35912
UniProt Accession D8QUP7; D8QUP7_SELML
Genbank Protein ID EFJ35912.1
Protein Name Ribosome biogenesis protein BOP1 homolog
Genbank Nucleotide ID GL377567
Gene Name SELMODRAFT_165451
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SELMODRAFT_165451 EFJ35912 EFJ35912
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-17 63.2 395 433
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ v++++  ++   l+sGs+Dgt++vW++ tg++ k
   Q: 395  GHTGAVSSISAdPTgEWLLSGSRDGTVRVWEVQTGRCKK 433
           8********99977799*******************986 PP
   
Organism Selaginella moellendorffii
Functional Description
(View)

Functional Description


     Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
 Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
Protein Sequence
(Fasta)
MAASDDDALQ VLSGDDQDDG AYSSDFEEEE ADSGEEEADL DEEEGDFDDE DEEDEDSDEE 60
DGAADGNVEA NDSANHEEIR EALLDYIGNG NAGADGDEES DDREAADESD SSEDEAPPRN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Smo-109604|E3,WD_repeat|Selaginella moellendorffii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCAGCGT CCGACGACGA TGCGCTCCAG GTTCTCTCGG GCGATGATCA AGACGATGGA 60
GCGTATTCCA GTGATTTTGA GGAGGAAGAG GCAGATTCTG GTGAGGAAGA GGCAGATTTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Smo-109604|E3,WD_repeat|Selaginella moellendorffii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08145--BOP1NT
PF00400--WD40
SMART

SM01035--BOP1NT
SM00320--WD40
Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG smo:SELMODRAFT_165451
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001158 Aegilops tauschii 55.61 0.00e+00 665.00
IUUC-Aml-001507 Ailuropoda melanoleuca 44.55 7.00e-146 510.00
IUUC-Atr-003141 Amborella trichopoda 59.91 2.00e-152 531.00
IUUC-Apl-003545 Anas platyrhynchos 43.68 5.00e-134 470.00
IUUC-Aly-005649 Arabidopsis lyrata 59.21 0.00e+00 769.00
IUUC-Ath-007625 Arabidopsis thaliana 57.00 0.00e+00 741.00
IUUC-Ago-007958 Ashbya gossypii 39.59 7.00e-142 497.00
IUUC-Acl-008344 Aspergillus clavatus 39.94 6.00e-123 434.00
IUUC-Afl-008616 Aspergillus flavus 38.59 1.00e-122 433.00
IUUC-Afu-009083 Aspergillus fumigatus 39.58 2.00e-118 419.00
IUUC-Ani-009365 Aspergillus nidulans 39.11 1.00e-122 433.00
IUUC-Ang-009796 Aspergillus niger 39.34 3.00e-122 431.00
IUUC-Aor-010015 Aspergillus oryzae 38.59 1.00e-122 433.00
IUUC-Ate-010537 Aspergillus terreus 38.50 2.00e-124 439.00
IUUC-Ame-011767 Astyanax mexicanus 47.40 3.00e-72 263.00
IUUC-Bgr-012286 Blumeria graminis 43.01 1.00e-134 473.00
IUUC-Bta-013569 Bos taurus 47.33 6.00e-161 560.00
IUUC-Bci-013820 Botrytis cinerea 41.85 1.00e-125 443.00
IUUC-Bdi-014895 Brachypodium distachyon 59.87 0.00e+00 786.00
IUUC-Bol-016099 Brassica oleracea 59.15 0.00e+00 773.00
IUUC-Bra-017174 Brassica rapa 59.15 0.00e+00 779.00
IUUC-Cel-018201 Caenorhabditis elegans 42.32 1.00e-135 476.00
IUUC-Cfa-020173 Canis familiaris 42.88 2.00e-145 508.00
IUUC-Cpo-021796 Cavia porcellus 46.78 4.00e-158 550.00
IUUC-Cre-022650 Chlamydomonas reinhardtii 52.52 0.00e+00 642.00
IUUC-Csa-023440 Chlorocebus sabaeus 46.64 2.00e-164 572.00
IUUC-Cin-025782 Ciona intestinalis 45.62 1.00e-159 556.00
IUUC-Csv-026352 Ciona savignyi 44.59 9.00e-159 552.00
IUUC-Cgl-026393 Colletotrichum gloeosporioides 37.37 3.00e-104 372.00
IUUC-Cne-027004 Cryptococcus neoformans 44.28 5.00e-158 550.00
IUUC-Cme-027242 Cyanidioschyzon merolae 34.76 4.00e-106 377.00
IUUC-Dre-028658 Danio rerio 48.36 5.00e-173 600.00
IUUC-Dno-028883 Dasypus novemcinctus 46.05 3.00e-158 551.00
IUUC-Dor-031031 Dipodomys ordii 44.33 1.00e-161 562.00
IUUC-Dse-031443 Dothistroma septosporum 37.73 2.00e-123 435.00
IUUC-Dme-031786 Drosophila melanogaster 43.01 2.00e-160 558.00
IUUC-Eca-033677 Equus caballus 46.73 2.00e-158 551.00
IUUC-Eeu-035310 Erinaceus europaeus 43.30 2.00e-124 438.00
IUUC-Fca-035888 Felis catus 45.16 8.00e-154 536.00
IUUC-Fal-037438 Ficedula albicollis 47.85 4.00e-137 480.00
IUUC-Fox-037973 Fusarium oxysporum 40.18 7.00e-137 480.00
IUUC-Fso-038187 Fusarium solani 39.59 9.00e-136 476.00
IUUC-Gmo-039114 Gadus morhua 45.83 1.00e-148 519.00
IUUC-Ggr-039746 Gaeumannomyces graminis 39.53 2.00e-135 475.00
IUUC-Gga-040631 Gallus gallus 46.93 2.00e-94 338.00
IUUC-Gac-042582 Gasterosteus aculeatus 46.82 4.00e-156 544.00
IUUC-Gma-044215 Glycine max 59.15 0.00e+00 762.00
IUUC-Ggo-045587 Gorilla gorilla 46.48 8.00e-164 569.00
IUUC-Hsa-046319 Homo sapiens 46.48 5.00e-164 570.00
IUUC-Hvu-047526 Hordeum vulgare 58.83 0.00e+00 749.00
IUUC-Itr-048683 Ictidomys tridecemlineatus 46.61 3.00e-160 557.00
IUUC-Kpa-049221 Komagataella pastoris 39.91 4.00e-132 464.00
IUUC-Lch-049640 Latimeria chalumnae 49.31 3.00e-176 610.00
IUUC-Loc-051930 Lepisosteus oculatus 50.08 2.00e-178 618.00
IUUC-Lma-053290 Leptosphaeria maculans 41.92 2.00e-124 439.00
IUUC-Laf-053903 Loxodonta africana 43.17 2.00e-134 471.00
IUUC-Mcc-055471 Macaca mulatta 46.48 3.00e-164 571.00
IUUC-Meu-056190 Macropus eugenii 47.04 2.00e-158 551.00
IUUC-Mor-057135 Magnaporthe oryzae 40.60 7.00e-127 447.00
IUUC-Mpo-057475 Magnaporthe poae 39.23 3.00e-126 445.00
IUUC-Mtr-058689 Medicago truncatula 58.56 0.00e+00 740.00
IUUC-Mla-059149 Melampsora laricipopulina 44.31 1.00e-153 535.00
IUUC-Mga-059645 Meleagris gallopavo 43.02 2.00e-58 218.00
IUUC-Mvi-060485 Microbotryum violaceum 41.62 4.00e-132 465.00
IUUC-Mmr-061674 Microcebus murinus 46.24 8.00e-156 543.00
IUUC-Mdo-062973 Monodelphis domestica 46.41 3.00e-165 574.00
IUUC-Mmu-064180 Mus musculus 43.62 1.00e-158 552.00
IUUC-Mac-064535 Musa acuminata 49.03 0.00e+00 652.00
IUUC-Mpu-066406 Mustela putorius furo 46.88 1.00e-162 566.00
IUUC-Mlu-067795 Myotis lucifugus 47.02 2.00e-151 528.00
IUUC-Nfi-068516 Neosartorya fischeri 40.00 3.00e-111 395.00
IUUC-Ncr-068767 Neurospora crassa 40.48 2.00e-121 429.00
IUUC-Ont-071614 Oreochromis niloticus 46.55 5.00e-170 590.00
IUUC-Obr-076799 Oryza brachyantha 59.69 0.00e+00 769.00
IUUC-Ogl-077134 Oryza glaberrima 59.40 0.00e+00 754.00
IUUC-Oin-079654 Oryza indica 59.40 0.00e+00 753.00
IUUC-Osa-085811 Oryza sativa 59.24 0.00e+00 753.00
IUUC-Ola-087361 Oryzias latipes 48.19 1.00e-172 598.00
IUUC-Oga-088015 Otolemur garnettii 45.98 6.00e-164 570.00
IUUC-Pan-092306 Papio anubis 46.72 4.00e-164 570.00
IUUC-Pma-094622 Petromyzon marinus 48.66 5.00e-173 600.00
IUUC-Pno-094794 Phaeosphaeria nodorum 37.69 9.00e-110 390.00
IUUC-Ppa-095528 Physcomitrella patens 61.65 3.00e-177 613.00
IUUC-Pfo-096682 Poecilia formosa 47.47 2.00e-172 598.00
IUUC-Pab-097939 Pongo abelii 45.98 2.00e-147 515.00
IUUC-Pop-099043 Populus trichocarpa 60.38 0.00e+00 705.00
IUUC-Pca-100333 Procavia capensis 45.98 1.00e-159 555.00
IUUC-Ppe-102078 Prunus persica 55.57 0.00e+00 712.00
IUUC-Pgr-103525 Puccinia graminis 43.24 5.00e-140 491.00
IUUC-Ptt-103929 Puccinia triticina 42.90 2.00e-133 469.00
IUUC-Pte-104029 Pyrenophora teres 41.95 2.00e-134 472.00
IUUC-Pyt-104446 Pyrenophora triticirepentis 42.02 2.00e-134 472.00
IUUC-Rno-105248 Rattus norvegicus 46.93 2.00e-160 558.00
IUUC-Sce-106381 Saccharomyces cerevisiae 38.53 1.00e-138 486.00
IUUC-Sha-106519 Sarcophilus harrisii 46.69 3.00e-165 574.00
IUUC-Sja-107908 Schizosaccharomyces japonicus 41.02 1.00e-135 476.00
IUUC-Spo-108071 Schizosaccharomyces pombe 39.77 1.00e-128 453.00
IUUC-Sit-110551 Setaria italica 59.28 0.00e+00 758.00
IUUC-Stu-112593 Solanum tuberosum 60.31 0.00e+00 770.00
IUUC-Sar-113123 Sorex araneus 42.39 4.00e-66 243.00
IUUC-Sbi-113945 Sorghum bicolor 58.83 0.00e+00 773.00
IUUC-Sre-115188 Sporisorium reilianum 39.71 6.00e-136 477.00
IUUC-Ssc-115352 Sus scrofa 46.15 2.00e-162 565.00
IUUC-Tru-117685 Takifugu rubripes 47.52 3.00e-173 600.00
IUUC-Tni-119982 Tetraodon nigroviridis 46.79 5.00e-165 573.00
IUUC-Tca-121664 Theobroma cacao 58.58 0.00e+00 802.00
IUUC-Tre-122229 Trichoderma reesei 38.71 9.00e-118 416.00
IUUC-Tvi-122576 Trichoderma virens 39.70 3.00e-121 428.00
IUUC-Tae-125703 Triticum aestivum 59.08 0.00e+00 744.00
IUUC-Tur-126781 Triticum urartu 55.61 0.00e+00 654.00
IUUC-Tme-127080 Tuber melanosporum 45.59 1.00e-157 549.00
IUUC-Ttr-128514 Tursiops truncatus 40.91 8.00e-129 453.00
IUUC-Uma-129556 Ustilago maydis 39.40 4.00e-132 464.00
IUUC-Vda-129715 Verticillium dahliae 39.61 4.00e-130 457.00
IUUC-Vvi-131211 Vitis vinifera 60.75 0.00e+00 789.00
IUUC-Xma-133883 Xiphophorus maculatus 47.44 2.00e-165 575.00
IUUC-Yli-134438 Yarrowia lipolytica 40.26 1.00e-131 463.00
IUUC-Zma-135341 Zea mays 57.23 0.00e+00 786.00
Created Date 25-Jun-2017

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