iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-094053

Ensembl Protein ID

ENSPSIP00000003234.1

UniProt Accession

K7F5C4; K7F5C4_PELSI

Genbank Protein ID

ENSPSIP00000003234

Protein Name

Protein HIRA

Genbank Nucleotide ID

AGCU01165685

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000003092.1	ENSPSIT00000003249.1	ENSPSIP00000003234.1
ENSPSIG00000003092.1	ENSPSIT00000003250.1	ENSPSIP00000003235.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-18	63.6	70	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H + v+c+++ ++  +l+sG+dD+ i+vW 
   Q: 70   HLACVNCVRWsNNgVYLASGGDDKLIMVWK 99
           8899******9777***************7 PP

Organism

Pelodiscus sinensis

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

IKYLRFNWVN YEGGKPIFSV DIHPDGTKFA TGGQGQDSGK VVIWNMDPVL KEEDEKNENI 60
SKMLCQMDNH LACVNCVRWS NNGVYLASGG DDKLIMVWKR AAYIGPSTVF GSSSKLANVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAGTATT TAAGATTTAA TTGGTTAATT CTTAATATTT TGTATTCCAG TGGTGTGCTT 60
TGTTATTGTG GTGATAGAAG CCATATAAAT AACTTGATAG ATCTCTAGGT ATTTTGTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	35.07	2.00e-84	307.00
IUUC-Aml-001723	Ailuropoda melanoleuca	84.90	0.00e+00	1592.00
IUUC-Atr-003132	Amborella trichopoda	40.66	1.00e-83	304.00
IUUC-Apl-003197	Anas platyrhynchos	92.89	0.00e+00	1766.00
IUUC-Aca-004733	Anolis carolinensis	87.24	0.00e+00	1689.00
IUUC-Aly-005446	Arabidopsis lyrata	35.27	2.00e-78	286.00
IUUC-Ath-007627	Arabidopsis thaliana	36.18	1.00e-81	297.00
IUUC-Ago-007766	Ashbya gossypii	30.30	1.00e-57	218.00
IUUC-Acl-008104	Aspergillus clavatus	29.31	4.00e-59	223.00
IUUC-Afl-008591	Aspergillus flavus	29.11	9.00e-58	218.00
IUUC-Afu-008781	Aspergillus fumigatus	33.69	4.00e-56	213.00
IUUC-Ani-009272	Aspergillus nidulans	28.40	1.00e-55	211.00
IUUC-Ang-009655	Aspergillus niger	33.33	1.00e-59	225.00
IUUC-Aor-010119	Aspergillus oryzae	29.11	3.00e-58	220.00
IUUC-Ate-010530	Aspergillus terreus	27.78	9.00e-54	205.00
IUUC-Ame-011147	Astyanax mexicanus	80.39	8.00e-48	181.00
IUUC-Bgr-012237	Blumeria graminis	32.67	2.00e-59	223.00
IUUC-Bta-013320	Bos taurus	82.63	0.00e+00	1631.00
IUUC-Bci-013795	Botrytis cinerea	32.58	3.00e-63	236.00
IUUC-Bdi-014075	Brachypodium distachyon	37.50	2.00e-88	320.00
IUUC-Bol-016440	Brassica oleracea	35.00	4.00e-87	316.00
IUUC-Bra-016651	Brassica rapa	36.31	9.00e-85	308.00
IUUC-Cel-018692	Caenorhabditis elegans	37.57	4.00e-72	266.00
IUUC-Cja-018987	Callithrix jacchus	84.64	0.00e+00	1525.00
IUUC-Cfa-020132	Canis familiaris	85.00	0.00e+00	1591.00
IUUC-Cpo-021484	Cavia porcellus	83.92	0.00e+00	1603.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	34.47	1.00e-58	221.00
IUUC-Csa-023081	Chlorocebus sabaeus	84.60	0.00e+00	1607.00
IUUC-Cin-025182	Ciona intestinalis	48.56	7.00e-153	534.00
IUUC-Csv-026154	Ciona savignyi	55.10	6.00e-148	518.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	29.39	6.00e-62	232.00
IUUC-Cne-026891	Cryptococcus neoformans	40.59	5.00e-80	292.00
IUUC-Cme-027349	Cyanidioschyzon merolae	30.36	4.00e-49	190.00
IUUC-Dre-027655	Danio rerio	70.26	0.00e+00	1373.00
IUUC-Dno-029557	Dasypus novemcinctus	75.03	0.00e+00	982.00
IUUC-Dor-030687	Dipodomys ordii	80.36	0.00e+00	684.00
IUUC-Dse-031334	Dothistroma septosporum	29.96	6.00e-60	225.00
IUUC-Dme-031746	Drosophila melanogaster	53.35	3.00e-150	526.00
IUUC-Ete-032384	Echinops telfairi	79.94	0.00e+00	1504.00
IUUC-Eca-033430	Equus caballus	84.40	0.00e+00	1575.00
IUUC-Fca-036121	Felis catus	84.04	0.00e+00	1591.00
IUUC-Fal-036817	Ficedula albicollis	92.19	0.00e+00	1770.00
IUUC-Fox-037906	Fusarium oxysporum	33.65	3.00e-64	239.00
IUUC-Fso-038409	Fusarium solani	31.05	3.00e-62	233.00
IUUC-Gmo-039151	Gadus morhua	84.72	0.00e+00	682.00
IUUC-Ggr-040016	Gaeumannomyces graminis	34.22	7.00e-66	245.00
IUUC-Gga-040936	Gallus gallus	92.49	0.00e+00	1842.00
IUUC-Gac-041405	Gasterosteus aculeatus	61.29	0.00e+00	1209.00
IUUC-Gma-044252	Glycine max	35.27	1.00e-85	311.00
IUUC-Ggo-045430	Gorilla gorilla	84.71	0.00e+00	1606.00
IUUC-Hsa-046442	Homo sapiens	84.50	0.00e+00	1605.00
IUUC-Hvu-047587	Hordeum vulgare	36.17	2.00e-78	287.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	94.68	8.00e-167	578.00
IUUC-Kpa-049145	Komagataella pastoris	31.54	1.00e-58	221.00
IUUC-Lch-050474	Latimeria chalumnae	77.67	0.00e+00	1470.00
IUUC-Lpe-051209	Leersia perrieri	35.15	4.00e-80	292.00
IUUC-Loc-052119	Lepisosteus oculatus	73.73	0.00e+00	1409.00
IUUC-Lma-053237	Leptosphaeria maculans	31.77	4.00e-62	233.00
IUUC-Laf-053718	Loxodonta africana	84.50	0.00e+00	1610.00
IUUC-Mcc-055621	Macaca mulatta	84.61	0.00e+00	1528.00
IUUC-Meu-055914	Macropus eugenii	81.29	0.00e+00	1468.00
IUUC-Mor-057090	Magnaporthe oryzae	33.00	4.00e-62	233.00
IUUC-Mpo-057364	Magnaporthe poae	34.47	3.00e-67	250.00
IUUC-Mtr-057744	Medicago truncatula	36.36	1.00e-86	314.00
IUUC-Mla-058914	Melampsora laricipopulina	40.43	8.00e-81	295.00
IUUC-Mga-060181	Meleagris gallopavo	89.77	0.00e+00	1801.00
IUUC-Mvi-060432	Microbotryum violaceum	38.13	8.00e-72	265.00
IUUC-Mmr-060871	Microcebus murinus	84.21	0.00e+00	1643.00
IUUC-Mdo-062301	Monodelphis domestica	87.15	0.00e+00	1639.00
IUUC-Mmu-063888	Mus musculus	83.63	0.00e+00	1577.00
IUUC-Mac-065137	Musa acuminata	36.60	6.00e-83	301.00
IUUC-Mpu-066732	Mustela putorius furo	84.80	0.00e+00	1621.00
IUUC-Mlu-067542	Myotis lucifugus	84.58	0.00e+00	1555.00
IUUC-Nfi-068396	Neosartorya fischeri	34.37	4.00e-56	213.00
IUUC-Ncr-068842	Neurospora crassa	32.28	3.00e-64	240.00
IUUC-Nle-070156	Nomascus leucogenys	84.60	0.00e+00	1614.00
IUUC-Opr-070808	Ochotona princeps	83.82	0.00e+00	1301.00
IUUC-Ont-072105	Oreochromis niloticus	68.46	0.00e+00	1357.00
IUUC-Ocu-074962	Oryctolagus cuniculus	84.90	0.00e+00	1602.00
IUUC-Oba-075178	Oryza barthii	36.58	1.00e-86	314.00
IUUC-Obr-076399	Oryza brachyantha	35.92	2.00e-87	317.00
IUUC-Ogu-078797	Oryza glumaepatula	36.58	1.00e-86	314.00
IUUC-Oin-080085	Oryza indica	35.58	8.00e-76	278.00
IUUC-Olo-081048	Oryza longistaminata	40.26	2.00e-64	240.00
IUUC-Ome-081324	Oryza meridionalis	36.58	2.00e-86	314.00
IUUC-Oni-082548	Oryza nivara	36.58	1.00e-86	314.00
IUUC-Opu-084008	Oryza punctata	41.07	3.00e-86	313.00
IUUC-Oru-084339	Oryza rufipogon	36.38	4.00e-86	312.00
IUUC-Osa-085782	Oryza sativa	36.38	4.00e-86	312.00
IUUC-Ola-087302	Oryzias latipes	67.18	0.00e+00	793.00
IUUC-Olu-087611	Ostreococcus lucimarinus	35.42	8.00e-87	315.00
IUUC-Oga-087935	Otolemur garnettii	84.63	0.00e+00	1578.00
IUUC-Oar-089229	Ovis aries	63.80	0.00e+00	993.00
IUUC-Ptr-090715	Pan troglodytes	84.50	0.00e+00	1605.00
IUUC-Pan-092318	Papio anubis	84.42	0.00e+00	1597.00
IUUC-Pno-094985	Phaeosphaeria nodorum	33.42	2.00e-55	211.00
IUUC-Ppa-095819	Physcomitrella patens	35.48	6.00e-85	308.00
IUUC-Pfo-096857	Poecilia formosa	67.30	0.00e+00	1294.00
IUUC-Pab-098047	Pongo abelii	84.60	0.00e+00	1607.00
IUUC-Pop-099865	Populus trichocarpa	40.82	5.00e-85	309.00
IUUC-Pca-100558	Procavia capensis	85.65	0.00e+00	683.00
IUUC-Ppe-101261	Prunus persica	36.38	1.00e-85	310.00
IUUC-Pva-102683	Pteropus vampyrus	84.18	0.00e+00	1599.00
IUUC-Pgr-103660	Puccinia graminis	39.67	5.00e-73	269.00
IUUC-Ptt-103900	Puccinia triticina	40.93	4.00e-75	275.00
IUUC-Pte-104209	Pyrenophora teres	34.09	2.00e-61	230.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	34.09	7.00e-61	229.00
IUUC-Rno-105566	Rattus norvegicus	83.14	0.00e+00	1592.00
IUUC-Sce-106291	Saccharomyces cerevisiae	32.02	3.00e-61	229.00
IUUC-Sha-107514	Sarcophilus harrisii	82.79	0.00e+00	1529.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	34.54	9.00e-76	278.00
IUUC-Spo-108162	Schizosaccharomyces pombe	38.52	9.00e-76	278.00
IUUC-Smo-109186	Selaginella moellendorffii	39.85	2.00e-84	307.00
IUUC-Sit-110730	Setaria italica	37.90	4.00e-89	322.00
IUUC-Sly-111547	Solanum lycopersicum	36.35	6.00e-86	312.00
IUUC-Stu-112705	Solanum tuberosum	36.20	4.00e-86	313.00
IUUC-Sar-113222	Sorex araneus	78.51	0.00e+00	1393.00
IUUC-Sbi-114272	Sorghum bicolor	37.80	6.00e-91	328.00
IUUC-Sre-115061	Sporisorium reilianum	35.28	6.00e-73	269.00
IUUC-Ssc-116364	Sus scrofa	83.23	0.00e+00	1645.00
IUUC-Tgu-116645	Taeniopygia guttata	92.79	0.00e+00	1813.00
IUUC-Tru-117590	Takifugu rubripes	66.70	0.00e+00	1312.00
IUUC-Tsy-119212	Tarsius syrichta	79.52	0.00e+00	882.00
IUUC-Tni-119915	Tetraodon nigroviridis	66.93	0.00e+00	1288.00
IUUC-Tca-121765	Theobroma cacao	35.61	2.00e-85	310.00
IUUC-Tre-121887	Trichoderma reesei	32.60	4.00e-55	209.00
IUUC-Tvi-122262	Trichoderma virens	32.85	2.00e-55	211.00
IUUC-Tae-124148	Triticum aestivum	44.26	9.00e-34	138.00
IUUC-Tur-126483	Triticum urartu	37.35	1.00e-88	321.00
IUUC-Tme-127202	Tuber melanosporum	31.97	1.00e-54	207.00
IUUC-Tbe-127350	Tupaia belangeri	76.33	1.00e-169	590.00
IUUC-Ttr-129077	Tursiops truncatus	80.04	0.00e+00	1589.00
IUUC-Uma-129465	Ustilago maydis	35.06	4.00e-75	276.00
IUUC-Vda-129844	Verticillium dahliae	34.08	2.00e-61	230.00
IUUC-Vvi-131397	Vitis vinifera	36.38	5.00e-86	312.00
IUUC-Xtr-132057	Xenopus tropicalis	75.19	0.00e+00	1432.00
IUUC-Xma-134139	Xiphophorus maculatus	69.60	0.00e+00	815.00
IUUC-Yli-134424	Yarrowia lipolytica	31.64	3.00e-61	230.00
IUUC-Zma-135839	Zea mays	37.67	3.00e-90	326.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence